RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 ANKRD30BQ9BXX2 1392 aa20.1■□□□□ 0.81
SSR4-202ENST00000370085 MED14O60244 1454 aa20.1■□□□□ 0.81
SSR4-202ENST00000370085 NPHP4O75161 1426 aaPredicted RBP20.09■□□□□ 0.81
SSR4-202ENST00000370085 RPGRIP1LQ68CZ1 1315 aa20.08■□□□□ 0.81
SSR4-202ENST00000370085 BCANQ96GW7 911 aa20.08■□□□□ 0.81
SSR4-202ENST00000370085 IQGAP1P46940 1657 aa20.07■□□□□ 0.8
SSR4-202ENST00000370085 LTKP29376 864 aa20.07■□□□□ 0.8
SSR4-202ENST00000370085 ZFYVE9O95405 1425 aa20.07■□□□□ 0.8
SSR4-202ENST00000370085 NEURL4Q96JN8 1562 aa20.07■□□□□ 0.8
SSR4-202ENST00000370085 VGFO15240 615 aaPredicted RBP20.03■□□□□ 0.8
SSR4-202ENST00000370085 RGL3Q3MIN7 710 aa20.03■□□□□ 0.8
SSR4-202ENST00000370085 PLEKHG1Q9ULL1 1385 aa20.03■□□□□ 0.8
SSR4-202ENST00000370085 DHX57Q6P158 1386 aaKnown RBP20.02■□□□□ 0.8
SSR4-202ENST00000370085 SPATA31E1Q6ZUB1 1445 aa20.02■□□□□ 0.79
SSR4-202ENST00000370085 NEXMIFQ5QGS0 1516 aa20■□□□□ 0.79
SSR4-202ENST00000370085 NUTM2DQ5VT03 806 aaPredicted RBP19.99■□□□□ 0.79
SSR4-202ENST00000370085 PPLO60437 1756 aa19.98■□□□□ 0.79
SSR4-202ENST00000370085 STAC3Q96MF2 364 aa19.96■□□□□ 0.79
SSR4-202ENST00000370085 DIP2AQ14689 1571 aa19.95■□□□□ 0.78
SSR4-202ENST00000370085 SLC26A8Q96RN1 970 aa19.94■□□□□ 0.78
SSR4-202ENST00000370085 TBX22Q9Y458 520 aa19.93■□□□□ 0.78
SSR4-202ENST00000370085 IFT172Q9UG01 1749 aa19.93■□□□□ 0.78
SSR4-202ENST00000370085 SETBP1Q9Y6X0 1596 aa19.92■□□□□ 0.78
SSR4-202ENST00000370085 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
SSR4-202ENST00000370085 ZNF335Q9H4Z2 1342 aaPredicted RBP19.91■□□□□ 0.78
SSR4-202ENST00000370085 CPS1P31327 1500 aa19.89■□□□□ 0.77
SSR4-202ENST00000370085 MYOM2P54296 1465 aa19.89■□□□□ 0.77
SSR4-202ENST00000370085 NEUROD1Q13562 356 aa19.89■□□□□ 0.77
SSR4-202ENST00000370085 DCAF11Q8TEB1 546 aa19.89■□□□□ 0.77
SSR4-202ENST00000370085 PIK3R4Q99570 1358 aa19.89■□□□□ 0.77
SSR4-202ENST00000370085 ADAMTS13Q76LX8 1427 aa19.88■□□□□ 0.77
SSR4-202ENST00000370085 CLSPNQ9HAW4 1339 aa19.88■□□□□ 0.77
SSR4-202ENST00000370085 ADGRF5Q8IZF2 1346 aa19.86■□□□□ 0.77
SSR4-202ENST00000370085 KCNA6P17658 529 aa19.86■□□□□ 0.77
SSR4-202ENST00000370085 SIN3AQ96ST3 1273 aa19.86■□□□□ 0.77
SSR4-202ENST00000370085 NRXN3Q9Y4C0 1643 aa19.85■□□□□ 0.77
SSR4-202ENST00000370085 CCER1Q8TC90 406 aaPredicted RBP19.85■□□□□ 0.77
SSR4-202ENST00000370085 KDM2AQ9Y2K7 1162 aa19.85■□□□□ 0.77
SSR4-202ENST00000370085 LTBP4Q8N2S1 1624 aa19.84■□□□□ 0.77
SSR4-202ENST00000370085 PIK3C2GO75747 1445 aa19.84■□□□□ 0.77
SSR4-202ENST00000370085 CHD2O14647 1828 aaKnown RBP19.83■□□□□ 0.77
SSR4-202ENST00000370085 CERKQ8TCT0 537 aa19.83■□□□□ 0.77
SSR4-202ENST00000370085 ALKQ9UM73 1620 aa19.83■□□□□ 0.76
SSR4-202ENST00000370085 NKTRP30414 1462 aaKnown RBP19.82■□□□□ 0.76
SSR4-202ENST00000370085 LAMC1P11047 1609 aa19.82■□□□□ 0.76
SSR4-202ENST00000370085 TONSLQ96HA7 1378 aa19.82■□□□□ 0.76
SSR4-202ENST00000370085 NRXN1Q9ULB1 1477 aa19.81■□□□□ 0.76
SSR4-202ENST00000370085 NWD1Q149M9 1564 aa19.81■□□□□ 0.76
SSR4-202ENST00000370085 IQSEC2Q5JU85 1478 aa19.8■□□□□ 0.76
SSR4-202ENST00000370085 STRCP1A6NGW2 1772 aa19.78■□□□□ 0.76
SSR4-202ENST00000370085 PROSER2Q86WR7 435 aaPredicted RBP19.78■□□□□ 0.76
SSR4-202ENST00000370085 L3MBTL2Q969R5 705 aa19.78■□□□□ 0.76
SSR4-202ENST00000370085 C14orf93Q9H972 538 aaKnown RBP19.78■□□□□ 0.76
SSR4-202ENST00000370085 AMOTL2Q9Y2J4 779 aa19.78■□□□□ 0.76
SSR4-202ENST00000370085 METP08581 1390 aa19.78■□□□□ 0.76
SSR4-202ENST00000370085 SETD1AO15047 1707 aaKnown RBP19.76■□□□□ 0.75
SSR4-202ENST00000370085 LRRC7Q96NW7 1537 aa19.75■□□□□ 0.75
SSR4-202ENST00000370085 CFAP70Q5T0N1 1121 aa19.74■□□□□ 0.75
SSR4-202ENST00000370085 TIMELESSQ9UNS1 1208 aa19.73■□□□□ 0.75
SSR4-202ENST00000370085 XRN1Q8IZH2 1706 aaKnown RBP19.73■□□□□ 0.75
SSR4-202ENST00000370085 C14orf37Q86TY3 774 aa19.72■□□□□ 0.75
SSR4-202ENST00000370085 PRAG1Q86YV5 1406 aa19.72■□□□□ 0.75
SSR4-202ENST00000370085 PTPRUQ92729 1446 aa19.72■□□□□ 0.75
SSR4-202ENST00000370085 NCOA3Q9Y6Q9 1424 aa19.72■□□□□ 0.75
SSR4-202ENST00000370085 TMEM94Q12767 1356 aa19.71■□□□□ 0.75
SSR4-202ENST00000370085 KIAA1210Q9ULL0 1709 aa19.71■□□□□ 0.75
SSR4-202ENST00000370085 LRPPRCP42704 1394 aaKnown RBP19.7■□□□□ 0.74
SSR4-202ENST00000370085 PTCH1Q13635 1447 aa19.7■□□□□ 0.74
SSR4-202ENST00000370085 TMEM132EQ6IEE7 984 aa19.7■□□□□ 0.74
SSR4-202ENST00000370085 STK26Q9P289 416 aa19.69■□□□□ 0.74
SSR4-202ENST00000370085 MSH6P52701 1360 aa19.69■□□□□ 0.74
SSR4-202ENST00000370085 YTHDC2Q9H6S0 1430 aaKnown RBP19.68■□□□□ 0.74
SSR4-202ENST00000370085 ABCC11Q96J66 1382 aa19.68■□□□□ 0.74
SSR4-202ENST00000370085 TOM1O60784 492 aa19.67■□□□□ 0.74
SSR4-202ENST00000370085 KNDC1Q76NI1 1749 aa19.67■□□□□ 0.74
SSR4-202ENST00000370085 TECPR2O15040 1411 aa19.66■□□□□ 0.74
SSR4-202ENST00000370085 ASXL1Q8IXJ9 1541 aa19.66■□□□□ 0.74
SSR4-202ENST00000370085 XIRP1Q702N8 1843 aaKnown RBP19.65■□□□□ 0.74
SSR4-202ENST00000370085 UBAP1LF5GYI3 381 aa19.65■□□□□ 0.74
SSR4-202ENST00000370085 SIRT1Q96EB6 747 aa19.64■□□□□ 0.73
SSR4-202ENST00000370085 C19orf44Q9H6X5 657 aa19.64■□□□□ 0.73
SSR4-202ENST00000370085 ADGRB1O14514 1584 aa19.63■□□□□ 0.73
SSR4-202ENST00000370085 ROBO2Q9HCK4 1378 aa19.63■□□□□ 0.73
SSR4-202ENST00000370085 FBXO41Q8TF61 875 aa19.63■□□□□ 0.73
SSR4-202ENST00000370085 RBM33Q96EV2 1170 aaKnown RBP19.63■□□□□ 0.73
SSR4-202ENST00000370085 FAM135BQ49AJ0 1406 aa19.62■□□□□ 0.73
SSR4-202ENST00000370085 ATF3P18847 181 aa19.62■□□□□ 0.73
SSR4-202ENST00000370085 ROCK2O75116 1388 aaKnown RBP19.61■□□□□ 0.73
SSR4-202ENST00000370085 CADPS2Q86UW7 1296 aa19.61■□□□□ 0.73
SSR4-202ENST00000370085 POGKQ9P215 609 aa19.61■□□□□ 0.73
SSR4-202ENST00000370085 TRPM1Q7Z4N2 1603 aa19.61■□□□□ 0.73
SSR4-202ENST00000370085 DLC1Q96QB1 1528 aa19.61■□□□□ 0.73
SSR4-202ENST00000370085 TRAK1Q9UPV9 953 aa19.6■□□□□ 0.73
SSR4-202ENST00000370085 DCCP43146 1447 aa19.59■□□□□ 0.73
SSR4-202ENST00000370085 ADGRL3Q9HAR2 1447 aa19.59■□□□□ 0.73
SSR4-202ENST00000370085 NBPF1Q3BBV0 1214 aa19.57■□□□□ 0.72
SSR4-202ENST00000370085 PRAM1Q96QH2 718 aa19.57■□□□□ 0.72
SSR4-202ENST00000370085 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.56■□□□□ 0.72
SSR4-202ENST00000370085 SCAF1Q9H7N4 1312 aaKnown RBP19.56■□□□□ 0.72
SSR4-202ENST00000370085 NBPF8Q3BBV2 869 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms