RNA–Protein interactions for RNA: ENST00000369983.3

GBF1-201, Transcript of golgi brefeldin A resistant guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBF1, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1-201ENST00000369983 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.2■□□□□ 0.184e-6■■■■■ 35.4
GBF1-201ENST00000369983 IFIT2P09913 472 aaKnown RBP16.19■□□□□ 0.18
GBF1-201ENST00000369983 PDE3BQ13370 1112 aa16.19■□□□□ 0.18
GBF1-201ENST00000369983 FBXO3Q9UK99 471 aa16.19■□□□□ 0.18
GBF1-201ENST00000369983 NFXL1Q6ZNB6 911 aa16.19■□□□□ 0.18
GBF1-201ENST00000369983 RAB3GAP2Q9H2M9 1393 aa16.18■□□□□ 0.18
GBF1-201ENST00000369983 MCTP1Q6DN14 999 aa16.17■□□□□ 0.18
GBF1-201ENST00000369983 CCDC70Q6NSX1 233 aa16.17■□□□□ 0.18
GBF1-201ENST00000369983 TOP2AP11388 1531 aaKnown RBP16.17■□□□□ 0.18
GBF1-201ENST00000369983 G3BP1Q13283 466 aaKnown RBP eCLIP16.17■□□□□ 0.182e-7■■■■□ 25.7
GBF1-201ENST00000369983 ANKRD20A12PQ8NF67 263 aa16.17■□□□□ 0.18
GBF1-201ENST00000369983 KIF15Q9NS87 1388 aa16.17■□□□□ 0.18
GBF1-201ENST00000369983 CPLX1O14810 134 aa16.16■□□□□ 0.18
GBF1-201ENST00000369983 NLRP2Q9NX02 1062 aa16.16■□□□□ 0.18
GBF1-201ENST00000369983 CCDC27Q2M243 656 aa16.16■□□□□ 0.18
GBF1-201ENST00000369983 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
GBF1-201ENST00000369983 ELL2O00472 640 aaPredicted RBP16.16■□□□□ 0.18
GBF1-201ENST00000369983 IKQ13123 557 aaPredicted RBP16.15■□□□□ 0.18
GBF1-201ENST00000369983 HMGB2P26583 209 aaKnown RBP16.15■□□□□ 0.18
GBF1-201ENST00000369983 HOOK1Q9UJC3 728 aaKnown RBP16.15■□□□□ 0.18
GBF1-201ENST00000369983 TMEM132AQ24JP5 1023 aa16.15■□□□□ 0.18
GBF1-201ENST00000369983 SLKQ9H2G2 1235 aaPredicted RBP16.15■□□□□ 0.18
GBF1-201ENST00000369983 ATP6V1DQ9Y5K8 247 aa16.15■□□□□ 0.18
GBF1-201ENST00000369983 KANK4Q5T7N3 995 aaPredicted RBP16.15■□□□□ 0.18
GBF1-201ENST00000369983 RRP7AQ9Y3A4 280 aaKnown RBP16.15■□□□□ 0.18
GBF1-201ENST00000369983 GZF1Q9H116 711 aaPredicted RBP16.15■□□□□ 0.18
GBF1-201ENST00000369983 FOXD4L1Q9NU39 408 aa16.15■□□□□ 0.18
GBF1-201ENST00000369983 FYB1O15117 783 aa16.14■□□□□ 0.17
GBF1-201ENST00000369983 RTN4Q9NQC3 1192 aaKnown RBP16.14■□□□□ 0.17
GBF1-201ENST00000369983 MROH2BQ7Z745 1585 aa16.14■□□□□ 0.17
GBF1-201ENST00000369983 ROCK1Q13464 1354 aa16.13■□□□□ 0.17
GBF1-201ENST00000369983 GOLGA6L19H0YKK7 550 aa16.13■□□□□ 0.17
GBF1-201ENST00000369983 NECTIN2Q92692 538 aa16.13■□□□□ 0.17
GBF1-201ENST00000369983 ZKSCAN1P17029 563 aaPredicted RBP16.13■□□□□ 0.17
GBF1-201ENST00000369983 ODF2Q5BJF6 829 aa16.13■□□□□ 0.17
GBF1-201ENST00000369983 RIC3Q7Z5B4 369 aa16.12■□□□□ 0.17
GBF1-201ENST00000369983 GPRASP1Q5JY77 1395 aa16.12■□□□□ 0.17
GBF1-201ENST00000369983 DIAPH1O60610 1272 aaKnown RBP16.12■□□□□ 0.17
GBF1-201ENST00000369983 DHX57Q6P158 1386 aaKnown RBP16.12■□□□□ 0.17
GBF1-201ENST00000369983 IPO7O95373 1038 aaKnown RBP16.12■□□□□ 0.17
GBF1-201ENST00000369983 ANKRD45Q5TZF3 282 aa16.12■□□□□ 0.17
GBF1-201ENST00000369983 ANO2Q9NQ90 1003 aa16.12■□□□□ 0.17
GBF1-201ENST00000369983 MIA2Q96PC5 1412 aa16.12■□□□□ 0.17
GBF1-201ENST00000369983 KIF6Q6ZMV9 814 aa16.12■□□□□ 0.17
GBF1-201ENST00000369983 FOXD4L5Q5VV16 416 aaPredicted RBP16.11■□□□□ 0.17
GBF1-201ENST00000369983 FOXD4L4Q8WXT5 416 aaPredicted RBP16.11■□□□□ 0.17
GBF1-201ENST00000369983 L3MBTL2Q969R5 705 aa16.11■□□□□ 0.17
GBF1-201ENST00000369983 CT47A1Q5JQC4 288 aaPredicted RBP16.11■□□□□ 0.17
GBF1-201ENST00000369983 RNF20Q5VTR2 975 aa16.11■□□□□ 0.17
GBF1-201ENST00000369983 NUTM2BA6NNL0 878 aaPredicted RBP16.1■□□□□ 0.17
GBF1-201ENST00000369983 BECN2A8MW95 431 aa16.1■□□□□ 0.17
GBF1-201ENST00000369983 NUTM2EB1AL46 878 aaPredicted RBP16.1■□□□□ 0.17
GBF1-201ENST00000369983 NUTM2AQ8IVF1 878 aaPredicted RBP16.1■□□□□ 0.17
GBF1-201ENST00000369983 PAF1Q8N7H5 531 aa16.09■□□□□ 0.17
GBF1-201ENST00000369983 STAC3Q96MF2 364 aa16.09■□□□□ 0.17
GBF1-201ENST00000369983 MYBBP1AQ9BQG0 1328 aaKnown RBP16.09■□□□□ 0.17
GBF1-201ENST00000369983 BRMS1Q9HCU9 246 aa16.09■□□□□ 0.17
GBF1-201ENST00000369983 SAFBQ15424 915 aaKnown RBP eCLIP16.09■□□□□ 0.17
GBF1-201ENST00000369983 PROSER2Q86WR7 435 aaPredicted RBP16.09■□□□□ 0.17
GBF1-201ENST00000369983 ZKSCAN2Q63HK3 967 aa16.08■□□□□ 0.17
GBF1-201ENST00000369983 HSP90AB4PQ58FF6 505 aa16.08■□□□□ 0.17
GBF1-201ENST00000369983 MYO15BQ96JP2 1530 aa16.08■□□□□ 0.16
GBF1-201ENST00000369983 PANK3Q9H999 370 aa16.08■□□□□ 0.16
GBF1-201ENST00000369983 FKBP5Q13451 457 aaPredicted RBP16.07■□□□□ 0.16
GBF1-201ENST00000369983 API5Q9BZZ5 524 aaKnown RBP16.07■□□□□ 0.16
GBF1-201ENST00000369983 TSPYL4Q9UJ04 414 aa16.07■□□□□ 0.16
GBF1-201ENST00000369983 E9PSI1 815 aa16.07■□□□□ 0.16
GBF1-201ENST00000369983 RBM42Q9BTD8 480 aaKnown RBP16.06■□□□□ 0.16
GBF1-201ENST00000369983 NEUROD6Q96NK8 337 aa16.06■□□□□ 0.16
GBF1-201ENST00000369983 PLIN1O60240 522 aa16.06■□□□□ 0.16
GBF1-201ENST00000369983 STRN4Q9NRL3 753 aa16.06■□□□□ 0.16
GBF1-201ENST00000369983 GOLGA6L3A6NEY3 463 aa16.05■□□□□ 0.16
GBF1-201ENST00000369983 SLC3A2P08195 630 aaKnown RBP16.05■□□□□ 0.16
GBF1-201ENST00000369983 AIMP1Q12904 312 aaKnown RBP16.05■□□□□ 0.16
GBF1-201ENST00000369983 WASHC4Q2M389 1173 aa16.05■□□□□ 0.16
GBF1-201ENST00000369983 ESCO1Q5FWF5 840 aa16.04■□□□□ 0.16
GBF1-201ENST00000369983 RALYLQ86SE5 291 aaKnown RBP16.04■□□□□ 0.16
GBF1-201ENST00000369983 ERC2O15083 957 aa16.04■□□□□ 0.16
GBF1-201ENST00000369983 XBP1P17861 261 aa16.04■□□□□ 0.16
GBF1-201ENST00000369983 EPS15P42566 896 aa16.04■□□□□ 0.16
GBF1-201ENST00000369983 CCAR2Q8N163 923 aaKnown RBP16.04■□□□□ 0.16
GBF1-201ENST00000369983 SMG6Q86US8 1419 aaKnown RBP16.04■□□□□ 0.16
GBF1-201ENST00000369983 SLC4A3P48751 1232 aa16.04■□□□□ 0.16
GBF1-201ENST00000369983 FAM177BA6PVY3 158 aa16.04■□□□□ 0.16
GBF1-201ENST00000369983 PIP4K2BP78356 416 aa16.03■□□□□ 0.16
GBF1-201ENST00000369983 NUTM2GQ5VZR2 741 aa16.03■□□□□ 0.16
GBF1-201ENST00000369983 TNNT3P45378 269 aaPredicted RBP16.03■□□□□ 0.16
GBF1-201ENST00000369983 TBC1D2BQ9UPU7 963 aa16.03■□□□□ 0.16
GBF1-201ENST00000369983 MTMR7Q9Y216 660 aa16.02■□□□□ 0.16
GBF1-201ENST00000369983 ATAD2BQ9ULI0 1458 aa16.02■□□□□ 0.16
GBF1-201ENST00000369983 RIPK4P57078 832 aa16.02■□□□□ 0.15
GBF1-201ENST00000369983 SETQ01105 290 aaPredicted RBP16.01■□□□□ 0.15
GBF1-201ENST00000369983 REC8O95072 547 aa16.01■□□□□ 0.15
GBF1-201ENST00000369983 ZFYVE27Q5T4F4 411 aa16.01■□□□□ 0.15
GBF1-201ENST00000369983 GAPVD1Q14C86 1478 aa16■□□□□ 0.15
GBF1-201ENST00000369983 ST20-MTHFSA0A0A6YYL1 179 aa16■□□□□ 0.15
GBF1-201ENST00000369983 NLRP6P59044 892 aa16■□□□□ 0.15
GBF1-201ENST00000369983 GNL3LQ9NVN8 582 aaKnown RBP16■□□□□ 0.15
GBF1-201ENST00000369983 RDXP35241 583 aaKnown RBP16■□□□□ 0.15
GBF1-201ENST00000369983 BCL2L13Q9BXK5 485 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms