RNA–Protein interactions for RNA: ENST00000369641.7

FAM3A-203, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5 BASIC

Gene FAM3A, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-203ENST00000369641 CCDC144AA2RUR9 1427 aa28.81■■■□□ 2.2
FAM3A-203ENST00000369641 ANKRD30BQ9BXX2 1392 aa28.8■■■□□ 2.2
FAM3A-203ENST00000369641 NUTM2DQ5VT03 806 aaPredicted RBP28.77■■■□□ 2.2
FAM3A-203ENST00000369641 NEXMIFQ5QGS0 1516 aa28.76■■■□□ 2.19
FAM3A-203ENST00000369641 ZNF326Q5BKZ1 582 aaKnown RBP28.75■■■□□ 2.19
FAM3A-203ENST00000369641 SPATA31E1Q6ZUB1 1445 aa28.74■■■□□ 2.19
FAM3A-203ENST00000369641 PCGF6Q9BYE7 350 aa28.72■■■□□ 2.19
FAM3A-203ENST00000369641 SENP3Q9H4L4 574 aaPredicted RBP28.72■■■□□ 2.19
FAM3A-203ENST00000369641 ZNF335Q9H4Z2 1342 aaPredicted RBP28.71■■■□□ 2.19
FAM3A-203ENST00000369641 PLEKHG1Q9ULL1 1385 aa28.71■■■□□ 2.19
FAM3A-203ENST00000369641 LTBP4Q8N2S1 1624 aa28.71■■■□□ 2.19
FAM3A-203ENST00000369641 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.71■■■□□ 2.19
FAM3A-203ENST00000369641 HDGFP51858 240 aaKnown RBP28.69■■■□□ 2.18
FAM3A-203ENST00000369641 DHX57Q6P158 1386 aaKnown RBP28.68■■■□□ 2.18
FAM3A-203ENST00000369641 PPP1R15AO75807 674 aaPredicted RBP28.68■■■□□ 2.18
FAM3A-203ENST00000369641 PPLO60437 1756 aa28.67■■■□□ 2.18
FAM3A-203ENST00000369641 STRCP1A6NGW2 1772 aa28.65■■■□□ 2.18
FAM3A-203ENST00000369641 RGL3Q3MIN7 710 aa28.65■■■□□ 2.18
FAM3A-203ENST00000369641 SLC26A8Q96RN1 970 aa28.65■■■□□ 2.18
FAM3A-203ENST00000369641 NRXN3Q9Y4C0 1643 aa28.65■■■□□ 2.18
FAM3A-203ENST00000369641 IFT172Q9UG01 1749 aa28.64■■■□□ 2.18
FAM3A-203ENST00000369641 ADAMTS13Q76LX8 1427 aa28.64■■■□□ 2.18
FAM3A-203ENST00000369641 RPGRIP1LQ68CZ1 1315 aa28.62■■■□□ 2.17
FAM3A-203ENST00000369641 BCANQ96GW7 911 aa28.6■■■□□ 2.17
FAM3A-203ENST00000369641 SETBP1Q9Y6X0 1596 aa28.59■■■□□ 2.17
FAM3A-203ENST00000369641 TBX22Q9Y458 520 aa28.55■■■□□ 2.16
FAM3A-203ENST00000369641 ADGRF5Q8IZF2 1346 aa28.54■■■□□ 2.16
FAM3A-203ENST00000369641 VGFO15240 615 aaPredicted RBP28.54■■■□□ 2.16
FAM3A-203ENST00000369641 CERKQ8TCT0 537 aa28.54■■■□□ 2.16
FAM3A-203ENST00000369641 DIP2AQ14689 1571 aa28.54■■■□□ 2.16
FAM3A-203ENST00000369641 CHD2O14647 1828 aaKnown RBP28.52■■■□□ 2.16
FAM3A-203ENST00000369641 SIN3AQ96ST3 1273 aa28.51■■■□□ 2.16
FAM3A-203ENST00000369641 SETD1AO15047 1707 aaKnown RBP28.51■■■□□ 2.15
FAM3A-203ENST00000369641 CPS1P31327 1500 aa28.51■■■□□ 2.15
FAM3A-203ENST00000369641 NWD1Q149M9 1564 aa28.5■■■□□ 2.15
FAM3A-203ENST00000369641 KCNA6P17658 529 aa28.48■■■□□ 2.15
FAM3A-203ENST00000369641 PTPRUQ92729 1446 aa28.47■■■□□ 2.15
FAM3A-203ENST00000369641 ALKQ9UM73 1620 aa28.47■■■□□ 2.15
FAM3A-203ENST00000369641 MYOM2P54296 1465 aa28.46■■■□□ 2.15
FAM3A-203ENST00000369641 NRXN1Q9ULB1 1477 aa28.46■■■□□ 2.15
FAM3A-203ENST00000369641 METP08581 1390 aa28.46■■■□□ 2.15
FAM3A-203ENST00000369641 LRRC7Q96NW7 1537 aa28.46■■■□□ 2.15
FAM3A-203ENST00000369641 PIK3C2GO75747 1445 aa28.44■■■□□ 2.14
FAM3A-203ENST00000369641 PIK3R4Q99570 1358 aa28.43■■■□□ 2.14
FAM3A-203ENST00000369641 XIRP1Q702N8 1843 aaKnown RBP28.43■■■□□ 2.14
FAM3A-203ENST00000369641 DCAF11Q8TEB1 546 aa28.41■■■□□ 2.14
FAM3A-203ENST00000369641 IQSEC2Q5JU85 1478 aa28.4■■■□□ 2.14
FAM3A-203ENST00000369641 NEUROD1Q13562 356 aa28.39■■■□□ 2.14
FAM3A-203ENST00000369641 KDM2AQ9Y2K7 1162 aa28.39■■■□□ 2.14
FAM3A-203ENST00000369641 XRN1Q8IZH2 1706 aaKnown RBP28.39■■■□□ 2.14
FAM3A-203ENST00000369641 NKTRP30414 1462 aaKnown RBP28.38■■■□□ 2.13
FAM3A-203ENST00000369641 ASXL1Q8IXJ9 1541 aa28.37■■■□□ 2.13
FAM3A-203ENST00000369641 AMOTL2Q9Y2J4 779 aa28.37■■■□□ 2.13
FAM3A-203ENST00000369641 RBM33Q96EV2 1170 aaKnown RBP28.36■■■□□ 2.13
FAM3A-203ENST00000369641 TMEM94Q12767 1356 aa28.33■■■□□ 2.13
FAM3A-203ENST00000369641 CFAP70Q5T0N1 1121 aa28.33■■■□□ 2.13
FAM3A-203ENST00000369641 PROSER2Q86WR7 435 aaPredicted RBP28.33■■■□□ 2.13
FAM3A-203ENST00000369641 C14orf93Q9H972 538 aaKnown RBP28.33■■■□□ 2.13
FAM3A-203ENST00000369641 L3MBTL2Q969R5 705 aa28.32■■■□□ 2.12
FAM3A-203ENST00000369641 TMEM132EQ6IEE7 984 aa28.29■■■□□ 2.12
FAM3A-203ENST00000369641 STAC3Q96MF2 364 aa28.29■■■□□ 2.12
FAM3A-203ENST00000369641 LAMC1P11047 1609 aa28.29■■■□□ 2.12
FAM3A-203ENST00000369641 FBXO41Q8TF61 875 aa28.25■■■□□ 2.11
FAM3A-203ENST00000369641 PRAG1Q86YV5 1406 aa28.25■■■□□ 2.11
FAM3A-203ENST00000369641 ADGRB1O14514 1584 aa28.24■■■□□ 2.11
FAM3A-203ENST00000369641 ROBO2Q9HCK4 1378 aa28.23■■■□□ 2.11
FAM3A-203ENST00000369641 LRPPRCP42704 1394 aaKnown RBP28.22■■■□□ 2.11
FAM3A-203ENST00000369641 PTCH1Q13635 1447 aa28.22■■■□□ 2.11
FAM3A-203ENST00000369641 KNDC1Q76NI1 1749 aa28.21■■■□□ 2.11
FAM3A-203ENST00000369641 YTHDC2Q9H6S0 1430 aaKnown RBP28.21■■■□□ 2.11
FAM3A-203ENST00000369641 TECPR2O15040 1411 aa28.19■■■□□ 2.1
FAM3A-203ENST00000369641 NCOA3Q9Y6Q9 1424 aa28.19■■■□□ 2.1
FAM3A-203ENST00000369641 UBAP1LF5GYI3 381 aa28.19■■■□□ 2.1
FAM3A-203ENST00000369641 ILDR1Q86SU0 546 aaPredicted RBP28.19■■■□□ 2.1
FAM3A-203ENST00000369641 STK26Q9P289 416 aa28.19■■■□□ 2.1
FAM3A-203ENST00000369641 ABCC11Q96J66 1382 aa28.18■■■□□ 2.1
FAM3A-203ENST00000369641 KIAA1210Q9ULL0 1709 aa28.17■■■□□ 2.1
FAM3A-203ENST00000369641 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.16■■■□□ 2.1
FAM3A-203ENST00000369641 CLSPNQ9HAW4 1339 aa28.15■■■□□ 2.1
FAM3A-203ENST00000369641 TONSLQ96HA7 1378 aa28.15■■■□□ 2.1
FAM3A-203ENST00000369641 NALCNQ8IZF0 1738 aa28.15■■■□□ 2.1
FAM3A-203ENST00000369641 MSH6P52701 1360 aa28.13■■■□□ 2.09
FAM3A-203ENST00000369641 PLEKHH1Q9ULM0 1364 aa28.13■■■□□ 2.09
FAM3A-203ENST00000369641 NBPF1Q3BBV0 1214 aa28.12■■■□□ 2.09
FAM3A-203ENST00000369641 NBPF8Q3BBV2 869 aa28.12■■■□□ 2.09
FAM3A-203ENST00000369641 CCER1Q8TC90 406 aaPredicted RBP28.12■■■□□ 2.09
FAM3A-203ENST00000369641 TOM1O60784 492 aa28.11■■■□□ 2.09
FAM3A-203ENST00000369641 WAPLQ7Z5K2 1190 aa28.11■■■□□ 2.09
FAM3A-203ENST00000369641 TRPM1Q7Z4N2 1603 aa28.11■■■□□ 2.09
FAM3A-203ENST00000369641 ADGRL3Q9HAR2 1447 aa28.1■■■□□ 2.09
FAM3A-203ENST00000369641 C14orf37Q86TY3 774 aa28.1■■■□□ 2.09
FAM3A-203ENST00000369641 C19orf44Q9H6X5 657 aa28.09■■■□□ 2.09
FAM3A-203ENST00000369641 DLC1Q96QB1 1528 aa28.08■■■□□ 2.09
FAM3A-203ENST00000369641 PIP4K2BP78356 416 aa28.07■■■□□ 2.08
FAM3A-203ENST00000369641 TRAK1Q9UPV9 953 aa28.07■■■□□ 2.08
FAM3A-203ENST00000369641 FAM135BQ49AJ0 1406 aa28.07■■■□□ 2.08
FAM3A-203ENST00000369641 SIRT1Q96EB6 747 aa28.06■■■□□ 2.08
FAM3A-203ENST00000369641 ARHGEF28Q8N1W1 1705 aaKnown RBP28.04■■■□□ 2.08
FAM3A-203ENST00000369641 DCCP43146 1447 aa28.03■■■□□ 2.08
FAM3A-203ENST00000369641 PRAM1Q96QH2 718 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms