RNA–Protein interactions for RNA: ENST00000369522.7

SYCP1-202, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-202ENST00000369522 NAP1L5Q96NT1 182 aaPredicted RBP10.07□□□□□ -0.8
SYCP1-202ENST00000369522 NUP160Q12769 1436 aa10.07□□□□□ -0.8
SYCP1-202ENST00000369522 HNRNPMP52272 730 aaKnown RBP eCLIP10.07□□□□□ -0.8
SYCP1-202ENST00000369522 GOLGA2Q08379 1002 aa10.07□□□□□ -0.8
SYCP1-202ENST00000369522 RSPH6AQ9H0K4 717 aa10.07□□□□□ -0.8
SYCP1-202ENST00000369522 SPINK5Q9NQ38 1064 aaPredicted RBP10.07□□□□□ -0.8
SYCP1-202ENST00000369522 TSPY4P0CV99 314 aa10.06□□□□□ -0.8
SYCP1-202ENST00000369522 TSPY10P0CW01 314 aa10.06□□□□□ -0.8
SYCP1-202ENST00000369522 ABCC2Q92887 1545 aa10.06□□□□□ -0.8
SYCP1-202ENST00000369522 MAST1Q9Y2H9 1570 aa10.06□□□□□ -0.8
SYCP1-202ENST00000369522 MADDQ8WXG6 1647 aa10.06□□□□□ -0.8
SYCP1-202ENST00000369522 TMF1P82094 1093 aa10.06□□□□□ -0.8
SYCP1-202ENST00000369522 POGKQ9P215 609 aa10.06□□□□□ -0.8
SYCP1-202ENST00000369522 SEC24BO95487 1268 aa10.06□□□□□ -0.8
SYCP1-202ENST00000369522 IGHDP01880 384 aa10.06□□□□□ -0.8
SYCP1-202ENST00000369522 NKTRP30414 1462 aaKnown RBP10.06□□□□□ -0.8
SYCP1-202ENST00000369522 PLXNC1O60486 1568 aa10.05□□□□□ -0.8
SYCP1-202ENST00000369522 AMER1Q5JTC6 1135 aaPredicted RBP10.05□□□□□ -0.8
SYCP1-202ENST00000369522 PIK3C2GO75747 1445 aa10.05□□□□□ -0.8
SYCP1-202ENST00000369522 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.04□□□□□ -0.8
SYCP1-202ENST00000369522 SPRYD3Q8NCJ5 442 aa10.04□□□□□ -0.8
SYCP1-202ENST00000369522 ASXL1Q8IXJ9 1541 aa10.04□□□□□ -0.8
SYCP1-202ENST00000369522 ATP10AO60312 1499 aa10.04□□□□□ -0.8
SYCP1-202ENST00000369522 BCAR3O75815 825 aa10.04□□□□□ -0.8
SYCP1-202ENST00000369522 VSIG10Q8N0Z9 540 aa10.04□□□□□ -0.8
SYCP1-202ENST00000369522 GZF1Q9H116 711 aaPredicted RBP10.04□□□□□ -0.8
SYCP1-202ENST00000369522 WDR43Q15061 677 aaKnown RBP eCLIP10.03□□□□□ -0.8
SYCP1-202ENST00000369522 GLIPR1L2Q4G1C9 344 aa10.03□□□□□ -0.8
SYCP1-202ENST00000369522 RRAGDQ9NQL2 400 aaPredicted RBP10.03□□□□□ -0.8
SYCP1-202ENST00000369522 SYCP2Q9BX26 1530 aa10.03□□□□□ -0.8
SYCP1-202ENST00000369522 PKNOX2Q96KN3 472 aa10.03□□□□□ -0.8
SYCP1-202ENST00000369522 PLEKHD1A6NEE1 506 aa10.03□□□□□ -0.8
SYCP1-202ENST00000369522 SPHKAPQ2M3C7 1700 aa10.03□□□□□ -0.8
SYCP1-202ENST00000369522 CEP152O94986 1710 aa10.02□□□□□ -0.8
SYCP1-202ENST00000369522 ANTXR1Q9H6X2 564 aa10.02□□□□□ -0.8
SYCP1-202ENST00000369522 CARMIL2Q6F5E8 1435 aa10.02□□□□□ -0.81
SYCP1-202ENST00000369522 CCDC146Q8IYE0 955 aa10.01□□□□□ -0.81
SYCP1-202ENST00000369522 DMRT2Q9Y5R5 561 aa10.01□□□□□ -0.81
SYCP1-202ENST00000369522 KNSTRNQ9Y448 316 aa10□□□□□ -0.81
SYCP1-202ENST00000369522 KDM5AP29375 1690 aaKnown RBP10□□□□□ -0.81
SYCP1-202ENST00000369522 TTC37Q6PGP7 1564 aa10□□□□□ -0.81
SYCP1-202ENST00000369522 CANXP27824 592 aaKnown RBP9.99□□□□□ -0.81
SYCP1-202ENST00000369522 SHPRHQ149N8 1683 aa9.99□□□□□ -0.81
SYCP1-202ENST00000369522 NPC1L1Q9UHC9 1359 aa9.99□□□□□ -0.81
SYCP1-202ENST00000369522 APAF1O14727 1248 aa9.98□□□□□ -0.81
SYCP1-202ENST00000369522 DUOX2Q9NRD8 1548 aa9.98□□□□□ -0.81
SYCP1-202ENST00000369522 MAPK8IP3Q9UPT6 1336 aa9.98□□□□□ -0.81
SYCP1-202ENST00000369522 JPH4Q96JJ6 628 aa9.98□□□□□ -0.81
SYCP1-202ENST00000369522 CLUAP1Q96AJ1 413 aa9.97□□□□□ -0.81
SYCP1-202ENST00000369522 PNNQ9H307 717 aaKnown RBP9.97□□□□□ -0.81
SYCP1-202ENST00000369522 CGNL1Q0VF96 1302 aa9.97□□□□□ -0.81
SYCP1-202ENST00000369522 E9PSI1 815 aa9.97□□□□□ -0.81
SYCP1-202ENST00000369522 PDE3AQ14432 1141 aa9.97□□□□□ -0.81
SYCP1-202ENST00000369522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.97□□□□□ -0.81
SYCP1-202ENST00000369522 NINLQ9Y2I6 1382 aa9.97□□□□□ -0.81
SYCP1-202ENST00000369522 SCAF11Q99590 1463 aaKnown RBP9.96□□□□□ -0.81
SYCP1-202ENST00000369522 BECN1Q14457 450 aa9.96□□□□□ -0.81
SYCP1-202ENST00000369522 PANK1Q8TE04 598 aa9.96□□□□□ -0.81
SYCP1-202ENST00000369522 SCAPERQ9BY12 1400 aa9.96□□□□□ -0.81
SYCP1-202ENST00000369522 TBC1D32Q96NH3 1257 aa9.96□□□□□ -0.82
SYCP1-202ENST00000369522 FSD2A1L4K1 749 aa9.95□□□□□ -0.82
SYCP1-202ENST00000369522 L1TD1Q5T7N2 865 aaKnown RBP9.95□□□□□ -0.82
SYCP1-202ENST00000369522 TBC1D2Q9BYX2 928 aa9.95□□□□□ -0.82
SYCP1-202ENST00000369522 COG6Q9Y2V7 657 aa9.95□□□□□ -0.82
SYCP1-202ENST00000369522 RTEL1-TNFRSF6BF6WH68 1400 aa9.95□□□□□ -0.82
SYCP1-202ENST00000369522 KIAA1210Q9ULL0 1709 aa9.95□□□□□ -0.82
SYCP1-202ENST00000369522 RSPH4AQ5TD94 716 aa9.95□□□□□ -0.82
SYCP1-202ENST00000369522 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.95□□□□□ -0.82
SYCP1-202ENST00000369522 ZMYM3Q14202 1370 aa9.95□□□□□ -0.82
SYCP1-202ENST00000369522 CLTCL1P53675 1640 aa9.95□□□□□ -0.82
SYCP1-202ENST00000369522 HSP90AA2PQ14568 343 aaPredicted RBP9.95□□□□□ -0.82
SYCP1-202ENST00000369522 CHMP7Q8WUX9 453 aaPredicted RBP9.95□□□□□ -0.82
SYCP1-202ENST00000369522 ARHGAP5Q13017 1502 aa9.95□□□□□ -0.82
SYCP1-202ENST00000369522 XRCC6P12956 609 aaKnown RBP eCLIP9.94□□□□□ -0.82
SYCP1-202ENST00000369522 TRPM2O94759 1503 aa9.94□□□□□ -0.82
SYCP1-202ENST00000369522 HSP90AA1P07900 732 aaKnown RBP9.94□□□□□ -0.82
SYCP1-202ENST00000369522 CENPJQ9HC77 1338 aaPredicted RBP9.93□□□□□ -0.82
SYCP1-202ENST00000369522 IQSEC2Q5JU85 1478 aa9.93□□□□□ -0.82
SYCP1-202ENST00000369522 SHROOM2Q13796 1616 aa9.93□□□□□ -0.82
SYCP1-202ENST00000369522 UPF2Q9HAU5 1272 aaKnown RBP9.93□□□□□ -0.82
SYCP1-202ENST00000369522 PCDHB15Q9Y5E8 787 aa9.93□□□□□ -0.82
SYCP1-202ENST00000369522 PANK2Q9BZ23 570 aa9.93□□□□□ -0.82
SYCP1-202ENST00000369522 ZMYND15Q9H091 742 aa9.92□□□□□ -0.82
SYCP1-202ENST00000369522 TNNQ9UQP3 1299 aa9.92□□□□□ -0.82
SYCP1-202ENST00000369522 ERVK-7P63135 1459 aa9.92□□□□□ -0.82
SYCP1-202ENST00000369522 GOLGA6L3A6NEY3 463 aa9.92□□□□□ -0.82
SYCP1-202ENST00000369522 WWC1Q8IX03 1113 aa9.92□□□□□ -0.82
SYCP1-202ENST00000369522 RLBP1P12271 317 aa9.91□□□□□ -0.82
SYCP1-202ENST00000369522 ERCC6Q03468 1493 aa9.91□□□□□ -0.82
SYCP1-202ENST00000369522 CDCA8Q53HL2 280 aa9.91□□□□□ -0.82
SYCP1-202ENST00000369522 MCM4P33991 863 aa9.9□□□□□ -0.82
SYCP1-202ENST00000369522 CARD14Q9BXL6 1004 aa9.9□□□□□ -0.82
SYCP1-202ENST00000369522 PDZRN3Q9UPQ7 1066 aa9.9□□□□□ -0.82
SYCP1-202ENST00000369522 ABCA6Q8N139 1617 aa9.9□□□□□ -0.82
SYCP1-202ENST00000369522 RARSP54136 660 aaKnown RBP9.9□□□□□ -0.82
SYCP1-202ENST00000369522 MYO3AQ8NEV4 1616 aa9.9□□□□□ -0.82
SYCP1-202ENST00000369522 CLCN1P35523 988 aa9.9□□□□□ -0.83
SYCP1-202ENST00000369522 NGEFQ8N5V2 710 aa9.9□□□□□ -0.83
SYCP1-202ENST00000369522 POLR3AO14802 1390 aaPredicted RBP9.89□□□□□ -0.83
SYCP1-202ENST00000369522 FBLN2P98095 1184 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms