RNA–Protein interactions for RNA: ENST00000369484.7

CMC4-202, Transcript of C-X9-C motif containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC4, Length 1,107 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4-202ENST00000369484 TMEM131LA2VDJ0 1609 aa41.14■■■■■ 4.18
CMC4-202ENST00000369484 NKTRP30414 1462 aaKnown RBP41.14■■■■■ 4.18
CMC4-202ENST00000369484 ZFYVE9O95405 1425 aa41.13■■■■■ 4.17
CMC4-202ENST00000369484 FAM135BQ49AJ0 1406 aa41.12■■■■■ 4.17
CMC4-202ENST00000369484 E9PCH4 1651 aa41.1■■■■■ 4.17
CMC4-202ENST00000369484 CHD2O14647 1828 aaKnown RBP41.1■■■■■ 4.17
CMC4-202ENST00000369484 ROBO1Q9Y6N7 1651 aa41.07■■■■■ 4.16
CMC4-202ENST00000369484 ROCK1Q13464 1354 aa41.06■■■■■ 4.16
CMC4-202ENST00000369484 IQGAP3Q86VI3 1631 aa41.06■■■■■ 4.16
CMC4-202ENST00000369484 PLEKHG1Q9ULL1 1385 aa41.05■■■■■ 4.16
CMC4-202ENST00000369484 PROSER2Q86WR7 435 aaPredicted RBP41.05■■■■■ 4.16
CMC4-202ENST00000369484 RIMS2Q9UQ26 1411 aa41.03■■■■■ 4.16
CMC4-202ENST00000369484 RBM33Q96EV2 1170 aaKnown RBP40.99■■■■■ 4.15
CMC4-202ENST00000369484 BCANQ96GW7 911 aa40.99■■■■■ 4.15
CMC4-202ENST00000369484 HDGFP51858 240 aaKnown RBP40.95■■■■■ 4.15
CMC4-202ENST00000369484 PPP1R15AO75807 674 aaPredicted RBP40.93■■■■■ 4.14
CMC4-202ENST00000369484 MSH6P52701 1360 aa40.92■■■■■ 4.14
CMC4-202ENST00000369484 DIP2AQ14689 1571 aa40.87■■■■■ 4.13
CMC4-202ENST00000369484 RGS17Q9UGC6 210 aaPredicted RBP40.87■■■■■ 4.13
CMC4-202ENST00000369484 ABCF1Q8NE71 845 aaKnown RBP eCLIP40.86■■■■■ 4.13
CMC4-202ENST00000369484 TBX22Q9Y458 520 aa40.86■■■■■ 4.13
CMC4-202ENST00000369484 ADAMTS13Q76LX8 1427 aa40.85■■■■■ 4.13
CMC4-202ENST00000369484 CHGAP10645 457 aaKnown RBP40.84■■■■■ 4.13
CMC4-202ENST00000369484 PHLPP1O60346 1717 aa40.83■■■■■ 4.13
CMC4-202ENST00000369484 NUP155O75694 1391 aa40.83■■■■■ 4.13
CMC4-202ENST00000369484 NCOA3Q9Y6Q9 1424 aa40.8■■■■■ 4.12
CMC4-202ENST00000369484 SLAIN2Q9P270 581 aa40.79■■■■■ 4.12
CMC4-202ENST00000369484 SPHKAPQ2M3C7 1700 aa40.79■■■■■ 4.12
CMC4-202ENST00000369484 PIK3R4Q99570 1358 aa40.76■■■■■ 4.12
CMC4-202ENST00000369484 ITGAEP38570 1179 aa40.75■■■■■ 4.11
CMC4-202ENST00000369484 NUTM2DQ5VT03 806 aaPredicted RBP40.75■■■■■ 4.11
CMC4-202ENST00000369484 SIPA1L2Q9P2F8 1722 aaPredicted RBP40.73■■■■■ 4.11
CMC4-202ENST00000369484 TRPM2O94759 1503 aa40.72■■■■■ 4.11
CMC4-202ENST00000369484 COL16A1Q07092 1604 aaPredicted RBP40.71■■■■■ 4.11
CMC4-202ENST00000369484 NRXN3Q9Y4C0 1643 aa40.67■■■■■ 4.1
CMC4-202ENST00000369484 JCADQ9P266 1359 aa40.64■■■■■ 4.1
CMC4-202ENST00000369484 PPARGC1BQ86YN6 1023 aaKnown RBP40.64■■■■■ 4.1
CMC4-202ENST00000369484 SETBP1Q9Y6X0 1596 aa40.62■■■■■ 4.09
CMC4-202ENST00000369484 PTPRUQ92729 1446 aa40.62■■■■■ 4.09
CMC4-202ENST00000369484 C14orf37Q86TY3 774 aa40.61■■■■■ 4.09
CMC4-202ENST00000369484 XRN1Q8IZH2 1706 aaKnown RBP40.61■■■■■ 4.09
CMC4-202ENST00000369484 POTEAQ6S8J7 498 aa40.6■■■■■ 4.09
CMC4-202ENST00000369484 C19orf44Q9H6X5 657 aa40.59■■■■■ 4.09
CMC4-202ENST00000369484 AHDC1Q5TGY3 1603 aaPredicted RBP40.59■■■■■ 4.09
CMC4-202ENST00000369484 CADPS2Q86UW7 1296 aa40.58■■■■■ 4.09
CMC4-202ENST00000369484 AMOTL2Q9Y2J4 779 aa40.56■■■■■ 4.08
CMC4-202ENST00000369484 CLTCL1P53675 1640 aa40.54■■■■■ 4.08
CMC4-202ENST00000369484 ATF3P18847 181 aa40.53■■■■■ 4.08
CMC4-202ENST00000369484 RRBP1Q9P2E9 1410 aaKnown RBP40.52■■■■■ 4.08
CMC4-202ENST00000369484 SHPRHQ149N8 1683 aa40.51■■■■■ 4.08
CMC4-202ENST00000369484 KIF1BO60333 1816 aa40.51■■■■■ 4.07
CMC4-202ENST00000369484 DCCP43146 1447 aa40.49■■■■■ 4.07
CMC4-202ENST00000369484 NEXMIFQ5QGS0 1516 aa40.47■■■■■ 4.07
CMC4-202ENST00000369484 NAIPQ13075 1403 aa40.45■■■■■ 4.07
CMC4-202ENST00000369484 ZNF326Q5BKZ1 582 aaKnown RBP40.45■■■■■ 4.07
CMC4-202ENST00000369484 LRP6O75581 1613 aa40.45■■■■■ 4.07
CMC4-202ENST00000369484 SPATA31A6Q5VVP1 1343 aa40.43■■■■■ 4.06
CMC4-202ENST00000369484 METP08581 1390 aa40.41■■■■■ 4.06
CMC4-202ENST00000369484 SETD1AO15047 1707 aaKnown RBP40.41■■■■■ 4.06
CMC4-202ENST00000369484 BRINP3Q76B58 766 aa40.39■■■■■ 4.06
CMC4-202ENST00000369484 NHSL1Q5SYE7 1610 aa40.37■■■■■ 4.05
CMC4-202ENST00000369484 ASXL1Q8IXJ9 1541 aa40.37■■■■■ 4.05
CMC4-202ENST00000369484 MST1RQ04912 1400 aa40.35■■■■■ 4.05
CMC4-202ENST00000369484 NALCNQ8IZF0 1738 aa40.35■■■■■ 4.05
CMC4-202ENST00000369484 ADGRL3Q9HAR2 1447 aa40.31■■■■■ 4.04
CMC4-202ENST00000369484 HFM1A2PYH4 1435 aa40.27■■■■■ 4.04
CMC4-202ENST00000369484 MEX3CQ5U5Q3 659 aaKnown RBP40.25■■■■■ 4.03
CMC4-202ENST00000369484 SETD5Q9C0A6 1442 aa40.25■■■■■ 4.03
CMC4-202ENST00000369484 PPLO60437 1756 aa40.21■■■■■ 4.03
CMC4-202ENST00000369484 ZNF772Q68DY9 489 aaPredicted RBP40.21■■■■■ 4.03
CMC4-202ENST00000369484 PTCH1Q13635 1447 aa40.18■■■■■ 4.02
CMC4-202ENST00000369484 TRIM52Q96A61 297 aa40.16■■■■■ 4.02
CMC4-202ENST00000369484 VGFO15240 615 aaPredicted RBP40.14■■■■■ 4.02
CMC4-202ENST00000369484 PRAG1Q86YV5 1406 aa40.14■■■■■ 4.02
CMC4-202ENST00000369484 LAMC1P11047 1609 aa40.13■■■■■ 4.01
CMC4-202ENST00000369484 RPGRIP1LQ68CZ1 1315 aa40.11■■■■■ 4.01
CMC4-202ENST00000369484 NUTM2BA6NNL0 878 aaPredicted RBP40.1■■■■■ 4.01
CMC4-202ENST00000369484 NUTM2EB1AL46 878 aaPredicted RBP40.1■■■■■ 4.01
CMC4-202ENST00000369484 NUTM2AQ8IVF1 878 aaPredicted RBP40.1■■■■■ 4.01
CMC4-202ENST00000369484 LRRC59Q96AG4 307 aaKnown RBP40.1■■■■■ 4.01
CMC4-202ENST00000369484 SLC4A1APQ9BWU0 796 aaKnown RBP40.1■■■■■ 4.01
CMC4-202ENST00000369484 C1orf167Q5SNV9 1468 aa40.09■■■■■ 4.01
CMC4-202ENST00000369484 ROBO2Q9HCK4 1378 aa40.09■■■■■ 4.01
CMC4-202ENST00000369484 DDX17Q92841 729 aaKnown RBP40.06■■■■■ 4
CMC4-202ENST00000369484 PNPLA6Q8IY17 1366 aa40.05■■■■■ 4
CMC4-202ENST00000369484 CDK12Q9NYV4 1490 aaPredicted RBP40■■■■□ 3.99
CMC4-202ENST00000369484 AFF2P51816 1311 aa40■■■■□ 3.99
CMC4-202ENST00000369484 RXRBP28702 533 aa39.98■■■■□ 3.99
CMC4-202ENST00000369484 IFT172Q9UG01 1749 aa39.96■■■■□ 3.99
CMC4-202ENST00000369484 UPF1Q92900 1129 aaKnown RBP eCLIP39.92■■■■□ 3.98
CMC4-202ENST00000369484 SOS2Q07890 1332 aaPredicted RBP39.91■■■■□ 3.98
CMC4-202ENST00000369484 FOXD1Q16676 465 aa39.91■■■■□ 3.98
CMC4-202ENST00000369484 ORAI2Q96SN7 254 aa39.91■■■■□ 3.98
CMC4-202ENST00000369484 CDC42BPGQ6DT37 1551 aa39.91■■■■□ 3.98
CMC4-202ENST00000369484 CCDC144AA2RUR9 1427 aa39.9■■■■□ 3.98
CMC4-202ENST00000369484 C8orf37Q96NL8 207 aa39.89■■■■□ 3.98
CMC4-202ENST00000369484 SPATA31E1Q6ZUB1 1445 aa39.88■■■■□ 3.97
CMC4-202ENST00000369484 COL22A1Q8NFW1 1626 aaPredicted RBP39.85■■■■□ 3.97
CMC4-202ENST00000369484 KNDC1Q76NI1 1749 aa39.84■■■■□ 3.97
CMC4-202ENST00000369484 ADGRF5Q8IZF2 1346 aa39.84■■■■□ 3.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms