RNA–Protein interactions for RNA: ENST00000369220.8

CCNC-203, Transcript of cyclin C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNC, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-203ENST00000369220 SCAF11Q99590 1463 aaKnown RBP15.12■□□□□ 0.01
CCNC-203ENST00000369220 KIF1BO60333 1816 aa15.12■□□□□ 0.01
CCNC-203ENST00000369220 RIMS2Q9UQ26 1411 aa15.11■□□□□ 0.01
CCNC-203ENST00000369220 POLR1AO95602 1720 aaPredicted RBP15.11■□□□□ 0.01
CCNC-203ENST00000369220 SIN3AQ96ST3 1273 aa15.1■□□□□ 0.01
CCNC-203ENST00000369220 EID1Q9Y6B2 187 aa15.09■□□□□ 0.01
CCNC-203ENST00000369220 NEXMIFQ5QGS0 1516 aa15.08■□□□□ 0.01
CCNC-203ENST00000369220 NPHP4O75161 1426 aaPredicted RBP15.07■□□□□ 0
CCNC-203ENST00000369220 PPP1R15AO75807 674 aaPredicted RBP15.07■□□□□ 0
CCNC-203ENST00000369220 MED14O60244 1454 aa15.07■□□□□ 0
CCNC-203ENST00000369220 SLC26A8Q96RN1 970 aa15.05■□□□□ 0
CCNC-203ENST00000369220 IQGAP1P46940 1657 aa15.05■□□□□ 0
CCNC-203ENST00000369220 NEUROD1Q13562 356 aa15.05■□□□□ -0
CCNC-203ENST00000369220 BCANQ96GW7 911 aa15.03■□□□□ -0
CCNC-203ENST00000369220 DMRT2Q9Y5R5 561 aa15.03■□□□□ -0
CCNC-203ENST00000369220 ADGRF5Q8IZF2 1346 aa15.03■□□□□ -0
CCNC-203ENST00000369220 PLEKHG1Q9ULL1 1385 aa15.03■□□□□ -0
CCNC-203ENST00000369220 PPLO60437 1756 aa15.02■□□□□ -0
CCNC-203ENST00000369220 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.02■□□□□ -0
CCNC-203ENST00000369220 ZNF335Q9H4Z2 1342 aaPredicted RBP15.02■□□□□ -0
CCNC-203ENST00000369220 ADAMTS13Q76LX8 1427 aa15.01□□□□□ -0.01
CCNC-203ENST00000369220 IFT172Q9UG01 1749 aa15.01□□□□□ -0.01
CCNC-203ENST00000369220 HDGFP51858 240 aaKnown RBP15.01□□□□□ -0.01
CCNC-203ENST00000369220 NRXN3Q9Y4C0 1643 aa15□□□□□ -0.01
CCNC-203ENST00000369220 DCAF11Q8TEB1 546 aa15□□□□□ -0.01
CCNC-203ENST00000369220 RPGRIP1LQ68CZ1 1315 aa15□□□□□ -0.01
CCNC-203ENST00000369220 CCER1Q8TC90 406 aaPredicted RBP14.99□□□□□ -0.01
CCNC-203ENST00000369220 KDM2AQ9Y2K7 1162 aa14.99□□□□□ -0.01
CCNC-203ENST00000369220 VGFO15240 615 aaPredicted RBP14.99□□□□□ -0.01
CCNC-203ENST00000369220 SETBP1Q9Y6X0 1596 aa14.97□□□□□ -0.01
CCNC-203ENST00000369220 L3MBTL2Q969R5 705 aa14.97□□□□□ -0.01
CCNC-203ENST00000369220 PIK3C2GO75747 1445 aa14.96□□□□□ -0.01
CCNC-203ENST00000369220 METP08581 1390 aa14.96□□□□□ -0.02
CCNC-203ENST00000369220 MYOM2P54296 1465 aa14.95□□□□□ -0.02
CCNC-203ENST00000369220 STRCP1A6NGW2 1772 aa14.94□□□□□ -0.02
CCNC-203ENST00000369220 NRXN1Q9ULB1 1477 aa14.94□□□□□ -0.02
CCNC-203ENST00000369220 TBX22Q9Y458 520 aa14.93□□□□□ -0.02
CCNC-203ENST00000369220 LTBP4Q8N2S1 1624 aa14.93□□□□□ -0.02
CCNC-203ENST00000369220 ALKQ9UM73 1620 aa14.93□□□□□ -0.02
CCNC-203ENST00000369220 PTPRUQ92729 1446 aa14.92□□□□□ -0.02
CCNC-203ENST00000369220 SETD1AO15047 1707 aaKnown RBP14.92□□□□□ -0.02
CCNC-203ENST00000369220 CFAP70Q5T0N1 1121 aa14.92□□□□□ -0.02
CCNC-203ENST00000369220 RBM33Q96EV2 1170 aaKnown RBP14.92□□□□□ -0.02
CCNC-203ENST00000369220 TMEM132EQ6IEE7 984 aa14.91□□□□□ -0.02
CCNC-203ENST00000369220 DIP2AQ14689 1571 aa14.91□□□□□ -0.02
CCNC-203ENST00000369220 TONSLQ96HA7 1378 aa14.91□□□□□ -0.02
CCNC-203ENST00000369220 KCNA6P17658 529 aa14.9□□□□□ -0.02
CCNC-203ENST00000369220 ASXL1Q8IXJ9 1541 aa14.9□□□□□ -0.02
CCNC-203ENST00000369220 CLSPNQ9HAW4 1339 aa14.9□□□□□ -0.02
CCNC-203ENST00000369220 PRAG1Q86YV5 1406 aa14.89□□□□□ -0.03
CCNC-203ENST00000369220 C14orf93Q9H972 538 aaKnown RBP14.88□□□□□ -0.03
CCNC-203ENST00000369220 AMOTL2Q9Y2J4 779 aa14.88□□□□□ -0.03
CCNC-203ENST00000369220 CHD2O14647 1828 aaKnown RBP14.88□□□□□ -0.03
CCNC-203ENST00000369220 NWD1Q149M9 1564 aa14.87□□□□□ -0.03
CCNC-203ENST00000369220 PIK3R4Q99570 1358 aa14.86□□□□□ -0.03
CCNC-203ENST00000369220 NBPF8Q3BBV2 869 aa14.86□□□□□ -0.03
CCNC-203ENST00000369220 STK26Q9P289 416 aa14.86□□□□□ -0.03
CCNC-203ENST00000369220 LRRC7Q96NW7 1537 aa14.85□□□□□ -0.03
CCNC-203ENST00000369220 NBPF1Q3BBV0 1214 aa14.85□□□□□ -0.03
CCNC-203ENST00000369220 ADGRB1O14514 1584 aa14.85□□□□□ -0.03
CCNC-203ENST00000369220 XRN1Q8IZH2 1706 aaKnown RBP14.85□□□□□ -0.03
CCNC-203ENST00000369220 STAC3Q96MF2 364 aa14.84□□□□□ -0.03
CCNC-203ENST00000369220 CPS1P31327 1500 aa14.84□□□□□ -0.03
CCNC-203ENST00000369220 TMEM94Q12767 1356 aa14.84□□□□□ -0.03
CCNC-203ENST00000369220 CERKQ8TCT0 537 aa14.84□□□□□ -0.03
CCNC-203ENST00000369220 NKTRP30414 1462 aaKnown RBP14.83□□□□□ -0.03
CCNC-203ENST00000369220 ROBO2Q9HCK4 1378 aa14.83□□□□□ -0.03
CCNC-203ENST00000369220 LAMC1P11047 1609 aa14.83□□□□□ -0.04
CCNC-203ENST00000369220 YTHDC2Q9H6S0 1430 aaKnown RBP14.82□□□□□ -0.04
CCNC-203ENST00000369220 PROSER2Q86WR7 435 aaPredicted RBP14.82□□□□□ -0.04
CCNC-203ENST00000369220 XIRP1Q702N8 1843 aaKnown RBP14.81□□□□□ -0.04
CCNC-203ENST00000369220 LRPPRCP42704 1394 aaKnown RBP14.8□□□□□ -0.04
CCNC-203ENST00000369220 WAPLQ7Z5K2 1190 aa14.8□□□□□ -0.04
CCNC-203ENST00000369220 TRAK1Q9UPV9 953 aa14.8□□□□□ -0.04
CCNC-203ENST00000369220 PLEKHH1Q9ULM0 1364 aa14.79□□□□□ -0.04
CCNC-203ENST00000369220 PTCH1Q13635 1447 aa14.79□□□□□ -0.04
CCNC-203ENST00000369220 TRPM1Q7Z4N2 1603 aa14.79□□□□□ -0.04
CCNC-203ENST00000369220 ABCC11Q96J66 1382 aa14.78□□□□□ -0.04
CCNC-203ENST00000369220 TECPR2O15040 1411 aa14.78□□□□□ -0.04
CCNC-203ENST00000369220 SAFB2Q14151 953 aaKnown RBP eCLIP14.77□□□□□ -0.04
CCNC-203ENST00000369220 KIAA1210Q9ULL0 1709 aa14.77□□□□□ -0.05
CCNC-203ENST00000369220 ROCK2O75116 1388 aaKnown RBP14.77□□□□□ -0.05
CCNC-203ENST00000369220 C14orf37Q86TY3 774 aa14.76□□□□□ -0.05
CCNC-203ENST00000369220 PRAM1Q96QH2 718 aa14.75□□□□□ -0.05
CCNC-203ENST00000369220 KNDC1Q76NI1 1749 aa14.75□□□□□ -0.05
CCNC-203ENST00000369220 TIMELESSQ9UNS1 1208 aa14.75□□□□□ -0.05
CCNC-203ENST00000369220 RALGAPBQ86X10 1494 aa14.74□□□□□ -0.05
CCNC-203ENST00000369220 NALCNQ8IZF0 1738 aa14.74□□□□□ -0.05
CCNC-203ENST00000369220 IQSEC2Q5JU85 1478 aa14.72□□□□□ -0.05
CCNC-203ENST00000369220 UBAP1LF5GYI3 381 aa14.72□□□□□ -0.05
CCNC-203ENST00000369220 CARD11Q9BXL7 1154 aa14.72□□□□□ -0.05
CCNC-203ENST00000369220 MSH6P52701 1360 aa14.72□□□□□ -0.05
CCNC-203ENST00000369220 GPRASP1Q5JY77 1395 aa14.72□□□□□ -0.05
CCNC-203ENST00000369220 FAM135BQ49AJ0 1406 aa14.71□□□□□ -0.05
CCNC-203ENST00000369220 ADGRL3Q9HAR2 1447 aa14.71□□□□□ -0.05
CCNC-203ENST00000369220 ARHGEF28Q8N1W1 1705 aaKnown RBP14.71□□□□□ -0.05
CCNC-203ENST00000369220 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.71□□□□□ -0.05
CCNC-203ENST00000369220 DLC1Q96QB1 1528 aa14.71□□□□□ -0.05
CCNC-203ENST00000369220 HIRIP3Q9BW71 556 aaPredicted RBP14.71□□□□□ -0.06
CCNC-203ENST00000369220 C19orf44Q9H6X5 657 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms