RNA–Protein interactions for RNA: ENST00000369130.7

VPS45-202, Transcript of vacuolar protein sorting 45 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS45, Length 2,790 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-202ENST00000369130 PPM1GO15355 546 aaPredicted RBP12.79□□□□□ -0.36
VPS45-202ENST00000369130 CLUAP1Q96AJ1 413 aa12.79□□□□□ -0.36
VPS45-202ENST00000369130 SLKQ9H2G2 1235 aaPredicted RBP12.78□□□□□ -0.36
VPS45-202ENST00000369130 SHANK2Q9UPX8 1470 aa12.78□□□□□ -0.36
VPS45-202ENST00000369130 CENPQQ7L2Z9 268 aaPredicted RBP12.78□□□□□ -0.36
VPS45-202ENST00000369130 GSE1Q14687 1217 aa12.77□□□□□ -0.36
VPS45-202ENST00000369130 FAM161AQ3B820 660 aa12.77□□□□□ -0.36
VPS45-202ENST00000369130 NUTM2DQ5VT03 806 aaPredicted RBP12.77□□□□□ -0.36
VPS45-202ENST00000369130 SLFN5Q08AF3 891 aa12.77□□□□□ -0.37
VPS45-202ENST00000369130 MYO5CQ9NQX4 1742 aa12.77□□□□□ -0.37
VPS45-202ENST00000369130 ZMYM4Q5VZL5 1548 aa12.76□□□□□ -0.37
VPS45-202ENST00000369130 DDRGK1Q96HY6 314 aa12.76□□□□□ -0.37
VPS45-202ENST00000369130 TTC37Q6PGP7 1564 aa12.76□□□□□ -0.37
VPS45-202ENST00000369130 NUP160Q12769 1436 aa12.76□□□□□ -0.37
VPS45-202ENST00000369130 CARD14Q9BXL6 1004 aa12.75□□□□□ -0.37
VPS45-202ENST00000369130 WDR7Q9Y4E6 1490 aa12.75□□□□□ -0.37
VPS45-202ENST00000369130 GPRASP1Q5JY77 1395 aa12.74□□□□□ -0.37
VPS45-202ENST00000369130 PRDM15P57071 1507 aaPredicted RBP12.74□□□□□ -0.37
VPS45-202ENST00000369130 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.72□□□□□ -0.37
VPS45-202ENST00000369130 ZNF521Q96K83 1311 aa12.72□□□□□ -0.37
VPS45-202ENST00000369130 WASHC2CQ9Y4E1 1318 aa12.72□□□□□ -0.37
VPS45-202ENST00000369130 KIF3BO15066 747 aa12.72□□□□□ -0.37
VPS45-202ENST00000369130 SAFB2Q14151 953 aaKnown RBP eCLIP12.72□□□□□ -0.37
VPS45-202ENST00000369130 ERCC6L2Q5T890 1561 aa12.72□□□□□ -0.37
VPS45-202ENST00000369130 EIF5BO60841 1220 aaKnown RBP12.71□□□□□ -0.37
VPS45-202ENST00000369130 USP35Q9P2H5 1018 aa12.71□□□□□ -0.37
VPS45-202ENST00000369130 TRAK1Q9UPV9 953 aa12.71□□□□□ -0.37
VPS45-202ENST00000369130 ADGRF5Q8IZF2 1346 aa12.71□□□□□ -0.37
VPS45-202ENST00000369130 TMEM132EQ6IEE7 984 aa12.71□□□□□ -0.38
VPS45-202ENST00000369130 TRAPPC8Q9Y2L5 1435 aa12.71□□□□□ -0.38
VPS45-202ENST00000369130 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.7□□□□□ -0.38
VPS45-202ENST00000369130 SLC12A5Q9H2X9 1139 aa12.7□□□□□ -0.38
VPS45-202ENST00000369130 ARHGEF5Q12774 1597 aa12.7□□□□□ -0.38
VPS45-202ENST00000369130 RSPH4AQ5TD94 716 aa12.69□□□□□ -0.38
VPS45-202ENST00000369130 RLBP1P12271 317 aa12.69□□□□□ -0.38
VPS45-202ENST00000369130 POGKQ9P215 609 aa12.69□□□□□ -0.38
VPS45-202ENST00000369130 SPAG9O60271 1321 aaKnown RBP12.69□□□□□ -0.38
VPS45-202ENST00000369130 PREX2Q70Z35 1606 aa12.69□□□□□ -0.38
VPS45-202ENST00000369130 UGGT1Q9NYU2 1555 aa12.68□□□□□ -0.38
VPS45-202ENST00000369130 EFCAB2Q5VUJ9 269 aa12.67□□□□□ -0.38
VPS45-202ENST00000369130 WWC1Q8IX03 1113 aa12.67□□□□□ -0.38
VPS45-202ENST00000369130 CENPJQ9HC77 1338 aaPredicted RBP12.67□□□□□ -0.38
VPS45-202ENST00000369130 PCDHB15Q9Y5E8 787 aa12.66□□□□□ -0.38
VPS45-202ENST00000369130 CFAP65Q6ZU64 1925 aaKnown RBP12.66□□□□□ -0.38
VPS45-202ENST00000369130 USP19O94966 1318 aa12.66□□□□□ -0.38
VPS45-202ENST00000369130 MORC1Q86VD1 984 aa12.65□□□□□ -0.38
VPS45-202ENST00000369130 GZF1Q9H116 711 aaPredicted RBP12.65□□□□□ -0.38
VPS45-202ENST00000369130 NKTRP30414 1462 aaKnown RBP12.65□□□□□ -0.39
VPS45-202ENST00000369130 E9PSI1 815 aa12.64□□□□□ -0.39
VPS45-202ENST00000369130 PRKCSHP14314 528 aaPredicted RBP12.64□□□□□ -0.39
VPS45-202ENST00000369130 TCP11L2Q8N4U5 519 aa12.64□□□□□ -0.39
VPS45-202ENST00000369130 ASXL1Q8IXJ9 1541 aa12.64□□□□□ -0.39
VPS45-202ENST00000369130 CDCA8Q53HL2 280 aa12.64□□□□□ -0.39
VPS45-202ENST00000369130 TRMT2AQ8IZ69 625 aaKnown RBP12.64□□□□□ -0.39
VPS45-202ENST00000369130 TSR2Q969E8 191 aaKnown RBP12.64□□□□□ -0.39
VPS45-202ENST00000369130 UNC13BO14795 1591 aa12.63□□□□□ -0.39
VPS45-202ENST00000369130 MTHFSP49914 203 aa12.62□□□□□ -0.39
VPS45-202ENST00000369130 IQGAP3Q86VI3 1631 aa12.62□□□□□ -0.39
VPS45-202ENST00000369130 SCAF11Q99590 1463 aaKnown RBP12.62□□□□□ -0.39
VPS45-202ENST00000369130 MAST1Q9Y2H9 1570 aa12.61□□□□□ -0.39
VPS45-202ENST00000369130 ATP10AO60312 1499 aa12.61□□□□□ -0.39
VPS45-202ENST00000369130 GGT6Q6P531 493 aa12.61□□□□□ -0.39
VPS45-202ENST00000369130 PDZRN3Q9UPQ7 1066 aa12.61□□□□□ -0.39
VPS45-202ENST00000369130 MADDQ8WXG6 1647 aa12.6□□□□□ -0.39
VPS45-202ENST00000369130 EIF2AK4Q9P2K8 1649 aaKnown RBP12.6□□□□□ -0.39
VPS45-202ENST00000369130 DUOX2Q9NRD8 1548 aa12.6□□□□□ -0.39
VPS45-202ENST00000369130 U2AF1L5P0DN76 240 aaPredicted RBP12.6□□□□□ -0.39
VPS45-202ENST00000369130 RARSP54136 660 aaKnown RBP12.6□□□□□ -0.39
VPS45-202ENST00000369130 U2AF1Q01081 240 aaKnown RBP eCLIP12.6□□□□□ -0.39
VPS45-202ENST00000369130 U2SURPO15042 1029 aaKnown RBP12.59□□□□□ -0.39
VPS45-202ENST00000369130 SCAPERQ9BY12 1400 aa12.59□□□□□ -0.39
VPS45-202ENST00000369130 STK26Q9P289 416 aa12.59□□□□□ -0.39
VPS45-202ENST00000369130 CLTCL1P53675 1640 aa12.59□□□□□ -0.39
VPS45-202ENST00000369130 FBLN1P23142 703 aa12.58□□□□□ -0.39
VPS45-202ENST00000369130 MFAP1P55081 439 aaKnown RBP12.58□□□□□ -0.4
VPS45-202ENST00000369130 NSD3Q9BZ95 1437 aa12.58□□□□□ -0.4
VPS45-202ENST00000369130 CABP2Q9NPB3 220 aa12.57□□□□□ -0.4
VPS45-202ENST00000369130 ERVK-7P63135 1459 aa12.57□□□□□ -0.4
VPS45-202ENST00000369130 MYOM1P52179 1685 aa12.57□□□□□ -0.4
VPS45-202ENST00000369130 EIF3AQ14152 1382 aaKnown RBP12.57□□□□□ -0.4
VPS45-202ENST00000369130 PIK3C2GO75747 1445 aa12.57□□□□□ -0.4
VPS45-202ENST00000369130 CGNL1Q0VF96 1302 aa12.57□□□□□ -0.4
VPS45-202ENST00000369130 INSRP06213 1382 aa12.56□□□□□ -0.4
VPS45-202ENST00000369130 RNF17Q9BXT8 1623 aaKnown RBP12.56□□□□□ -0.4
VPS45-202ENST00000369130 IQGAP1P46940 1657 aa12.56□□□□□ -0.4
VPS45-202ENST00000369130 PLCH2O75038 1416 aa12.56□□□□□ -0.4
VPS45-202ENST00000369130 CHD1O14646 1710 aa12.56□□□□□ -0.4
VPS45-202ENST00000369130 TBC1D2Q9BYX2 928 aa12.56□□□□□ -0.4
VPS45-202ENST00000369130 LAMC1P11047 1609 aa12.55□□□□□ -0.4
VPS45-202ENST00000369130 PDE3AQ14432 1141 aa12.55□□□□□ -0.4
VPS45-202ENST00000369130 FTSJ3Q8IY81 847 aaKnown RBP12.55□□□□□ -0.4
VPS45-202ENST00000369130 RUNDC1Q96C34 613 aa12.54□□□□□ -0.4
VPS45-202ENST00000369130 GGNBP2Q9H3C7 697 aa12.54□□□□□ -0.4
VPS45-202ENST00000369130 FOXD4L1Q9NU39 408 aa12.54□□□□□ -0.4
VPS45-202ENST00000369130 SYNMO15061 1565 aa12.54□□□□□ -0.4
VPS45-202ENST00000369130 ITPRIPQ8IWB1 547 aa12.53□□□□□ -0.4
VPS45-202ENST00000369130 NOS1P29475 1434 aa12.53□□□□□ -0.4
VPS45-202ENST00000369130 EXOSC9Q06265 439 aaKnown RBP12.53□□□□□ -0.4
VPS45-202ENST00000369130 PLXNC1O60486 1568 aa12.53□□□□□ -0.4
VPS45-202ENST00000369130 BECN1Q14457 450 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms