RNA–Protein interactions for RNA: ENST00000368787.3

LCE3D-201, Transcript of late cornified envelope 3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCE3D, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3D-201ENST00000368787 KCNA6P17658 529 aa28.22■■■□□ 2.11
LCE3D-201ENST00000368787 SLC26A8Q96RN1 970 aa28.22■■■□□ 2.11
LCE3D-201ENST00000368787 RRBP1Q9P2E9 1410 aaKnown RBP28.21■■■□□ 2.11
LCE3D-201ENST00000368787 ZFYVE9O95405 1425 aa28.2■■■□□ 2.11
LCE3D-201ENST00000368787 RIMS2Q9UQ26 1411 aa28.2■■■□□ 2.11
LCE3D-201ENST00000368787 CHGAP10645 457 aaKnown RBP28.19■■■□□ 2.1
LCE3D-201ENST00000368787 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.19■■■□□ 2.1
LCE3D-201ENST00000368787 PLEKHG1Q9ULL1 1385 aa28.19■■■□□ 2.1
LCE3D-201ENST00000368787 XIRP1Q702N8 1843 aaKnown RBP28.18■■■□□ 2.1
LCE3D-201ENST00000368787 NKTRP30414 1462 aaKnown RBP28.16■■■□□ 2.1
LCE3D-201ENST00000368787 TMEM94Q12767 1356 aa28.14■■■□□ 2.1
LCE3D-201ENST00000368787 ILDR2Q71H61 639 aa28.14■■■□□ 2.1
LCE3D-201ENST00000368787 PROSER2Q86WR7 435 aaPredicted RBP28.14■■■□□ 2.1
LCE3D-201ENST00000368787 NWD1Q149M9 1564 aa28.14■■■□□ 2.1
LCE3D-201ENST00000368787 TBX22Q9Y458 520 aa28.08■■■□□ 2.09
LCE3D-201ENST00000368787 SPHKAPQ2M3C7 1700 aa28.08■■■□□ 2.09
LCE3D-201ENST00000368787 MED1Q15648 1581 aaPredicted RBP28.07■■■□□ 2.08
LCE3D-201ENST00000368787 CHD2O14647 1828 aaKnown RBP28.06■■■□□ 2.08
LCE3D-201ENST00000368787 NAIPQ13075 1403 aa28.06■■■□□ 2.08
LCE3D-201ENST00000368787 DIP2AQ14689 1571 aa28.06■■■□□ 2.08
LCE3D-201ENST00000368787 SOCS7O14512 581 aa28.05■■■□□ 2.08
LCE3D-201ENST00000368787 FAM135BQ49AJ0 1406 aa28.04■■■□□ 2.08
LCE3D-201ENST00000368787 SENP3Q9H4L4 574 aaPredicted RBP28.04■■■□□ 2.08
LCE3D-201ENST00000368787 MSH6P52701 1360 aa28.03■■■□□ 2.08
LCE3D-201ENST00000368787 PIK3R4Q99570 1358 aa28.01■■■□□ 2.07
LCE3D-201ENST00000368787 NUTM2DQ5VT03 806 aaPredicted RBP28■■■□□ 2.07
LCE3D-201ENST00000368787 HFM1A2PYH4 1435 aa28■■■□□ 2.07
LCE3D-201ENST00000368787 ADAMTS13Q76LX8 1427 aa28■■■□□ 2.07
LCE3D-201ENST00000368787 RBM33Q96EV2 1170 aaKnown RBP27.98■■■□□ 2.07
LCE3D-201ENST00000368787 NCOA3Q9Y6Q9 1424 aa27.98■■■□□ 2.07
LCE3D-201ENST00000368787 TRPM2O94759 1503 aa27.97■■■□□ 2.07
LCE3D-201ENST00000368787 PHF23Q9BUL5 403 aaPredicted RBP27.96■■■□□ 2.07
LCE3D-201ENST00000368787 ZNF326Q5BKZ1 582 aaKnown RBP27.95■■■□□ 2.06
LCE3D-201ENST00000368787 TRIM52Q96A61 297 aa27.94■■■□□ 2.06
LCE3D-201ENST00000368787 ROBO1Q9Y6N7 1651 aa27.93■■■□□ 2.06
LCE3D-201ENST00000368787 C14orf37Q86TY3 774 aa27.91■■■□□ 2.06
LCE3D-201ENST00000368787 KIF1BO60333 1816 aa27.9■■■□□ 2.06
LCE3D-201ENST00000368787 CLTCL1P53675 1640 aa27.9■■■□□ 2.06
LCE3D-201ENST00000368787 SLAIN2Q9P270 581 aa27.9■■■□□ 2.06
LCE3D-201ENST00000368787 SETBP1Q9Y6X0 1596 aa27.9■■■□□ 2.06
LCE3D-201ENST00000368787 SLC4A1APQ9BWU0 796 aaKnown RBP27.86■■■□□ 2.05
LCE3D-201ENST00000368787 AMOTL2Q9Y2J4 779 aa27.86■■■□□ 2.05
LCE3D-201ENST00000368787 CADPS2Q86UW7 1296 aa27.85■■■□□ 2.05
LCE3D-201ENST00000368787 C19orf44Q9H6X5 657 aa27.85■■■□□ 2.05
LCE3D-201ENST00000368787 NRXN3Q9Y4C0 1643 aa27.85■■■□□ 2.05
LCE3D-201ENST00000368787 NEXMIFQ5QGS0 1516 aa27.83■■■□□ 2.05
LCE3D-201ENST00000368787 ATF3P18847 181 aa27.82■■■□□ 2.04
LCE3D-201ENST00000368787 PTPRUQ92729 1446 aa27.81■■■□□ 2.04
LCE3D-201ENST00000368787 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.8■■■□□ 2.04
LCE3D-201ENST00000368787 XRN1Q8IZH2 1706 aaKnown RBP27.79■■■□□ 2.04
LCE3D-201ENST00000368787 PHLPP1O60346 1717 aa27.78■■■□□ 2.04
LCE3D-201ENST00000368787 VGFO15240 615 aaPredicted RBP27.77■■■□□ 2.04
LCE3D-201ENST00000368787 DCCP43146 1447 aa27.76■■■□□ 2.04
LCE3D-201ENST00000368787 RPGRIP1LQ68CZ1 1315 aa27.76■■■□□ 2.03
LCE3D-201ENST00000368787 METP08581 1390 aa27.74■■■□□ 2.03
LCE3D-201ENST00000368787 ACIN1Q9UKV3 1341 aaKnown RBP27.74■■■□□ 2.03
LCE3D-201ENST00000368787 JCADQ9P266 1359 aa27.73■■■□□ 2.03
LCE3D-201ENST00000368787 CCDC144AA2RUR9 1427 aa27.67■■■□□ 2.02
LCE3D-201ENST00000368787 COL16A1Q07092 1604 aaPredicted RBP27.67■■■□□ 2.02
LCE3D-201ENST00000368787 AHDC1Q5TGY3 1603 aaPredicted RBP27.67■■■□□ 2.02
LCE3D-201ENST00000368787 PPLO60437 1756 aa27.65■■■□□ 2.02
LCE3D-201ENST00000368787 ADGRL3Q9HAR2 1447 aa27.65■■■□□ 2.02
LCE3D-201ENST00000368787 MPHOSPH9Q99550 1183 aa27.64■■■□□ 2.02
LCE3D-201ENST00000368787 FOXD1Q16676 465 aa27.63■■■□□ 2.01
LCE3D-201ENST00000368787 PTCH1Q13635 1447 aa27.62■■■□□ 2.01
LCE3D-201ENST00000368787 BRINP3Q76B58 766 aa27.62■■■□□ 2.01
LCE3D-201ENST00000368787 RGS17Q9UGC6 210 aaPredicted RBP27.62■■■□□ 2.01
LCE3D-201ENST00000368787 SETD1AO15047 1707 aaKnown RBP27.61■■■□□ 2.01
LCE3D-201ENST00000368787 MST1RQ04912 1400 aa27.6■■■□□ 2.01
LCE3D-201ENST00000368787 SPATA31A6Q5VVP1 1343 aa27.6■■■□□ 2.01
LCE3D-201ENST00000368787 PRAG1Q86YV5 1406 aa27.58■■■□□ 2.01
LCE3D-201ENST00000368787 ASXL1Q8IXJ9 1541 aa27.58■■■□□ 2.01
LCE3D-201ENST00000368787 SETD5Q9C0A6 1442 aa27.58■■■□□ 2
LCE3D-201ENST00000368787 NALCNQ8IZF0 1738 aa27.57■■■□□ 2
LCE3D-201ENST00000368787 ANKRD30BQ9BXX2 1392 aa27.56■■■□□ 2
LCE3D-201ENST00000368787 SHPRHQ149N8 1683 aa27.56■■■□□ 2
LCE3D-201ENST00000368787 SPATA31E1Q6ZUB1 1445 aa27.54■■■□□ 2
LCE3D-201ENST00000368787 ROBO2Q9HCK4 1378 aa27.52■■■□□ 2
LCE3D-201ENST00000368787 RGL3Q3MIN7 710 aa27.52■■■□□ 2
LCE3D-201ENST00000368787 NHSL1Q5SYE7 1610 aa27.51■■□□□ 1.99
LCE3D-201ENST00000368787 MEX3CQ5U5Q3 659 aaKnown RBP27.5■■□□□ 1.99
LCE3D-201ENST00000368787 POTEAQ6S8J7 498 aa27.49■■□□□ 1.99
LCE3D-201ENST00000368787 IFT172Q9UG01 1749 aa27.49■■□□□ 1.99
LCE3D-201ENST00000368787 ADGRF5Q8IZF2 1346 aa27.48■■□□□ 1.99
LCE3D-201ENST00000368787 C1orf167Q5SNV9 1468 aa27.47■■□□□ 1.99
LCE3D-201ENST00000368787 LRRC59Q96AG4 307 aaKnown RBP27.47■■□□□ 1.99
LCE3D-201ENST00000368787 LRP6O75581 1613 aa27.46■■□□□ 1.99
LCE3D-201ENST00000368787 RAB3GAP2Q9H2M9 1393 aa27.44■■□□□ 1.98
LCE3D-201ENST00000368787 ZNF772Q68DY9 489 aaPredicted RBP27.43■■□□□ 1.98
LCE3D-201ENST00000368787 PIK3C2GO75747 1445 aa27.41■■□□□ 1.98
LCE3D-201ENST00000368787 TECPR2O15040 1411 aa27.41■■□□□ 1.98
LCE3D-201ENST00000368787 LRPPRCP42704 1394 aaKnown RBP27.4■■□□□ 1.98
LCE3D-201ENST00000368787 CDC42BPGQ6DT37 1551 aa27.39■■□□□ 1.98
LCE3D-201ENST00000368787 LAMC1P11047 1609 aa27.38■■□□□ 1.97
LCE3D-201ENST00000368787 ABCC11Q96J66 1382 aa27.38■■□□□ 1.97
LCE3D-201ENST00000368787 NUTM2BA6NNL0 878 aaPredicted RBP27.38■■□□□ 1.97
LCE3D-201ENST00000368787 NUTM2EB1AL46 878 aaPredicted RBP27.38■■□□□ 1.97
LCE3D-201ENST00000368787 NUTM2AQ8IVF1 878 aaPredicted RBP27.38■■□□□ 1.97
LCE3D-201ENST00000368787 KNDC1Q76NI1 1749 aa27.37■■□□□ 1.97
LCE3D-201ENST00000368787 STK26Q9P289 416 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms