RNA–Protein interactions for RNA: ENST00000368759.5

BCCIP-203, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 1,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-203ENST00000368759 TMEM131LA2VDJ0 1609 aa20.21■□□□□ 0.83
BCCIP-203ENST00000368759 NKTRP30414 1462 aaKnown RBP20.19■□□□□ 0.82
BCCIP-203ENST00000368759 E9PCH4 1651 aa20.19■□□□□ 0.82
BCCIP-203ENST00000368759 RBM33Q96EV2 1170 aaKnown RBP20.19■□□□□ 0.82
BCCIP-203ENST00000368759 FAM135BQ49AJ0 1406 aa20.18■□□□□ 0.82
BCCIP-203ENST00000368759 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
BCCIP-203ENST00000368759 ROBO1Q9Y6N7 1651 aa20.17■□□□□ 0.82
BCCIP-203ENST00000368759 RIMS2Q9UQ26 1411 aa20.16■□□□□ 0.82
BCCIP-203ENST00000368759 IQGAP3Q86VI3 1631 aa20.16■□□□□ 0.82
BCCIP-203ENST00000368759 ROCK1Q13464 1354 aa20.15■□□□□ 0.82
BCCIP-203ENST00000368759 PLEKHG1Q9ULL1 1385 aa20.15■□□□□ 0.82
BCCIP-203ENST00000368759 PROSER2Q86WR7 435 aaPredicted RBP20.15■□□□□ 0.82
BCCIP-203ENST00000368759 CHD2O14647 1828 aaKnown RBP20.14■□□□□ 0.81
BCCIP-203ENST00000368759 RGS17Q9UGC6 210 aaPredicted RBP20.11■□□□□ 0.81
BCCIP-203ENST00000368759 BCANQ96GW7 911 aa20.1■□□□□ 0.81
BCCIP-203ENST00000368759 ADAMTS13Q76LX8 1427 aa20.09■□□□□ 0.81
BCCIP-203ENST00000368759 MSH6P52701 1360 aa20.07■□□□□ 0.8
BCCIP-203ENST00000368759 PPP1R15AO75807 674 aaPredicted RBP20.06■□□□□ 0.8
BCCIP-203ENST00000368759 NUTM2DQ5VT03 806 aaPredicted RBP20.06■□□□□ 0.8
BCCIP-203ENST00000368759 NUP155O75694 1391 aa20.05■□□□□ 0.8
BCCIP-203ENST00000368759 CHGAP10645 457 aaKnown RBP20.05■□□□□ 0.8
BCCIP-203ENST00000368759 DIP2AQ14689 1571 aa20.05■□□□□ 0.8
BCCIP-203ENST00000368759 TBX22Q9Y458 520 aa20.04■□□□□ 0.8
BCCIP-203ENST00000368759 ITGAEP38570 1179 aa20.03■□□□□ 0.8
BCCIP-203ENST00000368759 PPARGC1BQ86YN6 1023 aaKnown RBP20.03■□□□□ 0.8
BCCIP-203ENST00000368759 PHLPP1O60346 1717 aa20.03■□□□□ 0.8
BCCIP-203ENST00000368759 HDGFP51858 240 aaKnown RBP20.02■□□□□ 0.79
BCCIP-203ENST00000368759 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.02■□□□□ 0.79
BCCIP-203ENST00000368759 SLAIN2Q9P270 581 aa20.02■□□□□ 0.79
BCCIP-203ENST00000368759 COL16A1Q07092 1604 aaPredicted RBP20.01■□□□□ 0.79
BCCIP-203ENST00000368759 NRXN3Q9Y4C0 1643 aa20.01■□□□□ 0.79
BCCIP-203ENST00000368759 SPHKAPQ2M3C7 1700 aa20■□□□□ 0.79
BCCIP-203ENST00000368759 PTPRUQ92729 1446 aa20■□□□□ 0.79
BCCIP-203ENST00000368759 NCOA3Q9Y6Q9 1424 aa20■□□□□ 0.79
BCCIP-203ENST00000368759 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.99■□□□□ 0.79
BCCIP-203ENST00000368759 TRPM2O94759 1503 aa19.98■□□□□ 0.79
BCCIP-203ENST00000368759 PIK3R4Q99570 1358 aa19.98■□□□□ 0.79
BCCIP-203ENST00000368759 POTEAQ6S8J7 498 aa19.97■□□□□ 0.79
BCCIP-203ENST00000368759 XRN1Q8IZH2 1706 aaKnown RBP19.95■□□□□ 0.78
BCCIP-203ENST00000368759 SETBP1Q9Y6X0 1596 aa19.95■□□□□ 0.78
BCCIP-203ENST00000368759 JCADQ9P266 1359 aa19.95■□□□□ 0.78
BCCIP-203ENST00000368759 CLTCL1P53675 1640 aa19.93■□□□□ 0.78
BCCIP-203ENST00000368759 AHDC1Q5TGY3 1603 aaPredicted RBP19.93■□□□□ 0.78
BCCIP-203ENST00000368759 LRP6O75581 1613 aa19.92■□□□□ 0.78
BCCIP-203ENST00000368759 RRBP1Q9P2E9 1410 aaKnown RBP19.92■□□□□ 0.78
BCCIP-203ENST00000368759 AMOTL2Q9Y2J4 779 aa19.92■□□□□ 0.78
BCCIP-203ENST00000368759 C14orf37Q86TY3 774 aa19.91■□□□□ 0.78
BCCIP-203ENST00000368759 C19orf44Q9H6X5 657 aa19.9■□□□□ 0.78
BCCIP-203ENST00000368759 NEXMIFQ5QGS0 1516 aa19.9■□□□□ 0.78
BCCIP-203ENST00000368759 NAIPQ13075 1403 aa19.89■□□□□ 0.77
BCCIP-203ENST00000368759 CADPS2Q86UW7 1296 aa19.88■□□□□ 0.77
BCCIP-203ENST00000368759 SETD1AO15047 1707 aaKnown RBP19.88■□□□□ 0.77
BCCIP-203ENST00000368759 METP08581 1390 aa19.88■□□□□ 0.77
BCCIP-203ENST00000368759 SHPRHQ149N8 1683 aa19.87■□□□□ 0.77
BCCIP-203ENST00000368759 DCCP43146 1447 aa19.86■□□□□ 0.77
BCCIP-203ENST00000368759 ATF3P18847 181 aa19.85■□□□□ 0.77
BCCIP-203ENST00000368759 BRINP3Q76B58 766 aa19.85■□□□□ 0.77
BCCIP-203ENST00000368759 ASXL1Q8IXJ9 1541 aa19.84■□□□□ 0.77
BCCIP-203ENST00000368759 MST1RQ04912 1400 aa19.84■□□□□ 0.77
BCCIP-203ENST00000368759 ZNF326Q5BKZ1 582 aaKnown RBP19.84■□□□□ 0.77
BCCIP-203ENST00000368759 SPATA31A6Q5VVP1 1343 aa19.83■□□□□ 0.76
BCCIP-203ENST00000368759 NALCNQ8IZF0 1738 aa19.83■□□□□ 0.76
BCCIP-203ENST00000368759 KIF1BO60333 1816 aa19.82■□□□□ 0.76
BCCIP-203ENST00000368759 NHSL1Q5SYE7 1610 aa19.81■□□□□ 0.76
BCCIP-203ENST00000368759 ADGRL3Q9HAR2 1447 aa19.8■□□□□ 0.76
BCCIP-203ENST00000368759 HFM1A2PYH4 1435 aa19.78■□□□□ 0.76
BCCIP-203ENST00000368759 SETD5Q9C0A6 1442 aa19.77■□□□□ 0.75
BCCIP-203ENST00000368759 MEX3CQ5U5Q3 659 aaKnown RBP19.74■□□□□ 0.75
BCCIP-203ENST00000368759 PTCH1Q13635 1447 aa19.73■□□□□ 0.75
BCCIP-203ENST00000368759 PPLO60437 1756 aa19.72■□□□□ 0.75
BCCIP-203ENST00000368759 ROBO2Q9HCK4 1378 aa19.72■□□□□ 0.75
BCCIP-203ENST00000368759 DDX17Q92841 729 aaKnown RBP19.72■□□□□ 0.75
BCCIP-203ENST00000368759 PRAG1Q86YV5 1406 aa19.72■□□□□ 0.75
BCCIP-203ENST00000368759 TRIM52Q96A61 297 aa19.71■□□□□ 0.75
BCCIP-203ENST00000368759 NUTM2BA6NNL0 878 aaPredicted RBP19.7■□□□□ 0.74
BCCIP-203ENST00000368759 NUTM2EB1AL46 878 aaPredicted RBP19.7■□□□□ 0.74
BCCIP-203ENST00000368759 ZNF772Q68DY9 489 aaPredicted RBP19.7■□□□□ 0.74
BCCIP-203ENST00000368759 NUTM2AQ8IVF1 878 aaPredicted RBP19.7■□□□□ 0.74
BCCIP-203ENST00000368759 C1orf167Q5SNV9 1468 aa19.7■□□□□ 0.74
BCCIP-203ENST00000368759 LAMC1P11047 1609 aa19.69■□□□□ 0.74
BCCIP-203ENST00000368759 PNPLA6Q8IY17 1366 aa19.69■□□□□ 0.74
BCCIP-203ENST00000368759 VGFO15240 615 aaPredicted RBP19.68■□□□□ 0.74
BCCIP-203ENST00000368759 SLC4A1APQ9BWU0 796 aaKnown RBP19.68■□□□□ 0.74
BCCIP-203ENST00000368759 RPGRIP1LQ68CZ1 1315 aa19.66■□□□□ 0.74
BCCIP-203ENST00000368759 FOXD1Q16676 465 aa19.65■□□□□ 0.74
BCCIP-203ENST00000368759 LRRC59Q96AG4 307 aaKnown RBP19.65■□□□□ 0.74
BCCIP-203ENST00000368759 AFF2P51816 1311 aa19.65■□□□□ 0.74
BCCIP-203ENST00000368759 CDK12Q9NYV4 1490 aaPredicted RBP19.63■□□□□ 0.73
BCCIP-203ENST00000368759 ORAI2Q96SN7 254 aa19.62■□□□□ 0.73
BCCIP-203ENST00000368759 IFT172Q9UG01 1749 aa19.62■□□□□ 0.73
BCCIP-203ENST00000368759 UPF1Q92900 1129 aaKnown RBP eCLIP19.61■□□□□ 0.73
BCCIP-203ENST00000368759 SPATA31E1Q6ZUB1 1445 aa19.61■□□□□ 0.73
BCCIP-203ENST00000368759 SOS2Q07890 1332 aaPredicted RBP19.6■□□□□ 0.73
BCCIP-203ENST00000368759 RXRBP28702 533 aa19.6■□□□□ 0.73
BCCIP-203ENST00000368759 CDC42BPGQ6DT37 1551 aa19.6■□□□□ 0.73
BCCIP-203ENST00000368759 ADGRF5Q8IZF2 1346 aa19.6■□□□□ 0.73
BCCIP-203ENST00000368759 C8orf37Q96NL8 207 aa19.59■□□□□ 0.73
BCCIP-203ENST00000368759 RGS12O14924 1447 aa19.58■□□□□ 0.73
BCCIP-203ENST00000368759 CCDC144AA2RUR9 1427 aa19.57■□□□□ 0.72
BCCIP-203ENST00000368759 COL22A1Q8NFW1 1626 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms