RNA–Protein interactions for RNA: ENST00000368516.1

C1orf43-203, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2 BASIC

Gene C1orf43, Length 872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-203ENST00000368516 RRBP1Q9P2E9 1410 aaKnown RBP24.45■■□□□ 1.51
C1orf43-203ENST00000368516 RIMS2Q9UQ26 1411 aa24.45■■□□□ 1.51
C1orf43-203ENST00000368516 HDGFP51858 240 aaKnown RBP24.45■■□□□ 1.5
C1orf43-203ENST00000368516 ILDR2Q71H61 639 aa24.45■■□□□ 1.5
C1orf43-203ENST00000368516 KCNA6P17658 529 aa24.44■■□□□ 1.5
C1orf43-203ENST00000368516 PLEKHG1Q9ULL1 1385 aa24.43■■□□□ 1.5
C1orf43-203ENST00000368516 NWD1Q149M9 1564 aa24.43■■□□□ 1.5
C1orf43-203ENST00000368516 BCANQ96GW7 911 aa24.43■■□□□ 1.5
C1orf43-203ENST00000368516 PPP1R15AO75807 674 aaPredicted RBP24.42■■□□□ 1.5
C1orf43-203ENST00000368516 NKTRP30414 1462 aaKnown RBP24.42■■□□□ 1.5
C1orf43-203ENST00000368516 CHGAP10645 457 aaKnown RBP24.4■■□□□ 1.5
C1orf43-203ENST00000368516 TMEM94Q12767 1356 aa24.4■■□□□ 1.5
C1orf43-203ENST00000368516 MED1Q15648 1581 aaPredicted RBP24.39■■□□□ 1.5
C1orf43-203ENST00000368516 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.39■■□□□ 1.49
C1orf43-203ENST00000368516 PROSER2Q86WR7 435 aaPredicted RBP24.37■■□□□ 1.49
C1orf43-203ENST00000368516 SPHKAPQ2M3C7 1700 aa24.37■■□□□ 1.49
C1orf43-203ENST00000368516 CHD2O14647 1828 aaKnown RBP24.36■■□□□ 1.49
C1orf43-203ENST00000368516 SENP3Q9H4L4 574 aaPredicted RBP24.35■■□□□ 1.49
C1orf43-203ENST00000368516 DIP2AQ14689 1571 aa24.33■■□□□ 1.49
C1orf43-203ENST00000368516 SOCS7O14512 581 aa24.32■■□□□ 1.48
C1orf43-203ENST00000368516 TBX22Q9Y458 520 aa24.32■■□□□ 1.48
C1orf43-203ENST00000368516 NAIPQ13075 1403 aa24.32■■□□□ 1.48
C1orf43-203ENST00000368516 FAM135BQ49AJ0 1406 aa24.3■■□□□ 1.48
C1orf43-203ENST00000368516 MSH6P52701 1360 aa24.29■■□□□ 1.48
C1orf43-203ENST00000368516 ADAMTS13Q76LX8 1427 aa24.28■■□□□ 1.48
C1orf43-203ENST00000368516 NUTM2DQ5VT03 806 aaPredicted RBP24.28■■□□□ 1.48
C1orf43-203ENST00000368516 RBM33Q96EV2 1170 aaKnown RBP24.27■■□□□ 1.48
C1orf43-203ENST00000368516 PIK3R4Q99570 1358 aa24.27■■□□□ 1.48
C1orf43-203ENST00000368516 HFM1A2PYH4 1435 aa24.26■■□□□ 1.47
C1orf43-203ENST00000368516 ROBO1Q9Y6N7 1651 aa24.25■■□□□ 1.47
C1orf43-203ENST00000368516 TRPM2O94759 1503 aa24.25■■□□□ 1.47
C1orf43-203ENST00000368516 NCOA3Q9Y6Q9 1424 aa24.23■■□□□ 1.47
C1orf43-203ENST00000368516 CLTCL1P53675 1640 aa24.22■■□□□ 1.47
C1orf43-203ENST00000368516 PHF23Q9BUL5 403 aaPredicted RBP24.21■■□□□ 1.47
C1orf43-203ENST00000368516 KIF1BO60333 1816 aa24.2■■□□□ 1.46
C1orf43-203ENST00000368516 ZNF326Q5BKZ1 582 aaKnown RBP24.2■■□□□ 1.46
C1orf43-203ENST00000368516 SETBP1Q9Y6X0 1596 aa24.2■■□□□ 1.46
C1orf43-203ENST00000368516 NRXN3Q9Y4C0 1643 aa24.19■■□□□ 1.46
C1orf43-203ENST00000368516 TRIM52Q96A61 297 aa24.18■■□□□ 1.46
C1orf43-203ENST00000368516 SLAIN2Q9P270 581 aa24.17■■□□□ 1.46
C1orf43-203ENST00000368516 C14orf37Q86TY3 774 aa24.16■■□□□ 1.46
C1orf43-203ENST00000368516 NEXMIFQ5QGS0 1516 aa24.15■■□□□ 1.46
C1orf43-203ENST00000368516 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.14■■□□□ 1.45
C1orf43-203ENST00000368516 XRN1Q8IZH2 1706 aaKnown RBP24.13■■□□□ 1.45
C1orf43-203ENST00000368516 PTPRUQ92729 1446 aa24.13■■□□□ 1.45
C1orf43-203ENST00000368516 AMOTL2Q9Y2J4 779 aa24.13■■□□□ 1.45
C1orf43-203ENST00000368516 PHLPP1O60346 1717 aa24.12■■□□□ 1.45
C1orf43-203ENST00000368516 SLC4A1APQ9BWU0 796 aaKnown RBP24.11■■□□□ 1.45
C1orf43-203ENST00000368516 C19orf44Q9H6X5 657 aa24.11■■□□□ 1.45
C1orf43-203ENST00000368516 CADPS2Q86UW7 1296 aa24.1■■□□□ 1.45
C1orf43-203ENST00000368516 ATF3P18847 181 aa24.09■■□□□ 1.45
C1orf43-203ENST00000368516 DCCP43146 1447 aa24.06■■□□□ 1.44
C1orf43-203ENST00000368516 METP08581 1390 aa24.05■■□□□ 1.44
C1orf43-203ENST00000368516 COL16A1Q07092 1604 aaPredicted RBP24.03■■□□□ 1.44
C1orf43-203ENST00000368516 VGFO15240 615 aaPredicted RBP24.03■■□□□ 1.44
C1orf43-203ENST00000368516 RPGRIP1LQ68CZ1 1315 aa24.02■■□□□ 1.44
C1orf43-203ENST00000368516 JCADQ9P266 1359 aa24.02■■□□□ 1.44
C1orf43-203ENST00000368516 AHDC1Q5TGY3 1603 aaPredicted RBP24.01■■□□□ 1.43
C1orf43-203ENST00000368516 PPLO60437 1756 aa24.01■■□□□ 1.43
C1orf43-203ENST00000368516 SETD1AO15047 1707 aaKnown RBP23.99■■□□□ 1.43
C1orf43-203ENST00000368516 ADGRL3Q9HAR2 1447 aa23.97■■□□□ 1.43
C1orf43-203ENST00000368516 RGS17Q9UGC6 210 aaPredicted RBP23.97■■□□□ 1.43
C1orf43-203ENST00000368516 CCDC144AA2RUR9 1427 aa23.96■■□□□ 1.43
C1orf43-203ENST00000368516 NALCNQ8IZF0 1738 aa23.96■■□□□ 1.43
C1orf43-203ENST00000368516 ACIN1Q9UKV3 1341 aaKnown RBP23.95■■□□□ 1.42
C1orf43-203ENST00000368516 FOXD1Q16676 465 aa23.95■■□□□ 1.42
C1orf43-203ENST00000368516 MST1RQ04912 1400 aa23.94■■□□□ 1.42
C1orf43-203ENST00000368516 PTCH1Q13635 1447 aa23.94■■□□□ 1.42
C1orf43-203ENST00000368516 BRINP3Q76B58 766 aa23.94■■□□□ 1.42
C1orf43-203ENST00000368516 SHPRHQ149N8 1683 aa23.93■■□□□ 1.42
C1orf43-203ENST00000368516 MPHOSPH9Q99550 1183 aa23.93■■□□□ 1.42
C1orf43-203ENST00000368516 ASXL1Q8IXJ9 1541 aa23.93■■□□□ 1.42
C1orf43-203ENST00000368516 PRAG1Q86YV5 1406 aa23.92■■□□□ 1.42
C1orf43-203ENST00000368516 SPATA31A6Q5VVP1 1343 aa23.91■■□□□ 1.42
C1orf43-203ENST00000368516 NHSL1Q5SYE7 1610 aa23.89■■□□□ 1.42
C1orf43-203ENST00000368516 IFT172Q9UG01 1749 aa23.88■■□□□ 1.41
C1orf43-203ENST00000368516 SPATA31E1Q6ZUB1 1445 aa23.88■■□□□ 1.41
C1orf43-203ENST00000368516 SETD5Q9C0A6 1442 aa23.88■■□□□ 1.41
C1orf43-203ENST00000368516 ROBO2Q9HCK4 1378 aa23.87■■□□□ 1.41
C1orf43-203ENST00000368516 ANKRD30BQ9BXX2 1392 aa23.86■■□□□ 1.41
C1orf43-203ENST00000368516 LRP6O75581 1613 aa23.85■■□□□ 1.41
C1orf43-203ENST00000368516 POTEAQ6S8J7 498 aa23.85■■□□□ 1.41
C1orf43-203ENST00000368516 RGL3Q3MIN7 710 aa23.83■■□□□ 1.41
C1orf43-203ENST00000368516 ADGRF5Q8IZF2 1346 aa23.83■■□□□ 1.4
C1orf43-203ENST00000368516 MEX3CQ5U5Q3 659 aaKnown RBP23.82■■□□□ 1.4
C1orf43-203ENST00000368516 C1orf167Q5SNV9 1468 aa23.81■■□□□ 1.4
C1orf43-203ENST00000368516 LRRC59Q96AG4 307 aaKnown RBP23.78■■□□□ 1.4
C1orf43-203ENST00000368516 RAB3GAP2Q9H2M9 1393 aa23.78■■□□□ 1.4
C1orf43-203ENST00000368516 LAMC1P11047 1609 aa23.77■■□□□ 1.4
C1orf43-203ENST00000368516 PIK3C2GO75747 1445 aa23.76■■□□□ 1.39
C1orf43-203ENST00000368516 CDC42BPGQ6DT37 1551 aa23.76■■□□□ 1.39
C1orf43-203ENST00000368516 KNDC1Q76NI1 1749 aa23.76■■□□□ 1.39
C1orf43-203ENST00000368516 TECPR2O15040 1411 aa23.76■■□□□ 1.39
C1orf43-203ENST00000368516 ZNF772Q68DY9 489 aaPredicted RBP23.74■■□□□ 1.39
C1orf43-203ENST00000368516 DDX17Q92841 729 aaKnown RBP23.74■■□□□ 1.39
C1orf43-203ENST00000368516 LRPPRCP42704 1394 aaKnown RBP23.74■■□□□ 1.39
C1orf43-203ENST00000368516 NUTM2BA6NNL0 878 aaPredicted RBP23.73■■□□□ 1.39
C1orf43-203ENST00000368516 NUTM2EB1AL46 878 aaPredicted RBP23.73■■□□□ 1.39
C1orf43-203ENST00000368516 NUTM2AQ8IVF1 878 aaPredicted RBP23.73■■□□□ 1.39
C1orf43-203ENST00000368516 PNPLA6Q8IY17 1366 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms