RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 ANP32CO43423 234 aa36.79■■■■□ 3.48
EFNA1-202ENST00000368407 ANP32EQ9BTT0 268 aa36.78■■■■□ 3.48
EFNA1-202ENST00000368407 KDM2AQ9Y2K7 1162 aa36.78■■■■□ 3.48
EFNA1-202ENST00000368407 A2ML1A8K2U0 1454 aa36.75■■■■□ 3.47
EFNA1-202ENST00000368407 MYO3AQ8NEV4 1616 aa36.74■■■■□ 3.47
EFNA1-202ENST00000368407 MYO5BQ9ULV0 1848 aa36.72■■■■□ 3.47
EFNA1-202ENST00000368407 NEFLP07196 543 aa36.71■■■■□ 3.47
EFNA1-202ENST00000368407 FKBP8Q14318 412 aa36.69■■■■□ 3.46
EFNA1-202ENST00000368407 UBR1Q8IWV7 1749 aa36.67■■■■□ 3.46
EFNA1-202ENST00000368407 NBPF8Q3BBV2 869 aa36.67■■■■□ 3.46
EFNA1-202ENST00000368407 SETD1BQ9UPS6 1966 aaKnown RBP36.66■■■■□ 3.46
EFNA1-202ENST00000368407 NUTM2DQ5VT03 806 aaPredicted RBP36.65■■■■□ 3.46
EFNA1-202ENST00000368407 RPGRIP1LQ68CZ1 1315 aa36.65■■■■□ 3.46
EFNA1-202ENST00000368407 CEP170BQ9Y4F5 1589 aaPredicted RBP36.64■■■■□ 3.46
EFNA1-202ENST00000368407 NEXMIFQ5QGS0 1516 aa36.64■■■■□ 3.46
EFNA1-202ENST00000368407 KDM5AP29375 1690 aaKnown RBP36.62■■■■□ 3.45
EFNA1-202ENST00000368407 IFT172Q9UG01 1749 aa36.61■■■■□ 3.45
EFNA1-202ENST00000368407 ADGRF5Q8IZF2 1346 aa36.6■■■■□ 3.45
EFNA1-202ENST00000368407 UHRF1BP1Q6BDS2 1440 aa36.59■■■■□ 3.45
EFNA1-202ENST00000368407 PPLO60437 1756 aa36.59■■■■□ 3.45
EFNA1-202ENST00000368407 PRAG1Q86YV5 1406 aa36.58■■■■□ 3.45
EFNA1-202ENST00000368407 RIMS2Q9UQ26 1411 aa36.58■■■■□ 3.45
EFNA1-202ENST00000368407 TMEM2Q9UHN6 1383 aa36.57■■■■□ 3.45
EFNA1-202ENST00000368407 MYOM2P54296 1465 aa36.57■■■■□ 3.45
EFNA1-202ENST00000368407 STAC3Q96MF2 364 aa36.56■■■■□ 3.44
EFNA1-202ENST00000368407 ZFYVE9O95405 1425 aa36.56■■■■□ 3.44
EFNA1-202ENST00000368407 ZNF142P52746 1687 aaPredicted RBP36.56■■■■□ 3.44
EFNA1-202ENST00000368407 THEMISQ8N1K5 641 aaPredicted RBP36.55■■■■□ 3.44
EFNA1-202ENST00000368407 VGFO15240 615 aaPredicted RBP36.52■■■■□ 3.44
EFNA1-202ENST00000368407 NRXN1Q9ULB1 1477 aa36.5■■■■□ 3.43
EFNA1-202ENST00000368407 SENP3Q9H4L4 574 aaPredicted RBP36.5■■■■□ 3.43
EFNA1-202ENST00000368407 ARHGAP23Q9P227 1491 aa36.48■■■■□ 3.43
EFNA1-202ENST00000368407 LTKP29376 864 aa36.47■■■■□ 3.43
EFNA1-202ENST00000368407 SLIT1O75093 1534 aa36.47■■■■□ 3.43
EFNA1-202ENST00000368407 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.46■■■■□ 3.43
EFNA1-202ENST00000368407 PIK3C2GO75747 1445 aa36.45■■■■□ 3.43
EFNA1-202ENST00000368407 TXNDC2Q86VQ3 553 aa36.43■■■■□ 3.42
EFNA1-202ENST00000368407 HDGFP51858 240 aaKnown RBP36.42■■■■□ 3.42
EFNA1-202ENST00000368407 BCANQ96GW7 911 aa36.42■■■■□ 3.42
EFNA1-202ENST00000368407 NBPF1Q3BBV0 1214 aa36.41■■■■□ 3.42
EFNA1-202ENST00000368407 CFAP70Q5T0N1 1121 aa36.4■■■■□ 3.42
EFNA1-202ENST00000368407 RALGAPBQ86X10 1494 aa36.4■■■■□ 3.42
EFNA1-202ENST00000368407 EID1Q9Y6B2 187 aa36.4■■■■□ 3.42
EFNA1-202ENST00000368407 TRPM1Q7Z4N2 1603 aa36.39■■■■□ 3.42
EFNA1-202ENST00000368407 ERICH6BQ5W0A0 696 aa36.38■■■■□ 3.41
EFNA1-202ENST00000368407 LMTK3Q96Q04 1460 aa36.36■■■■□ 3.41
EFNA1-202ENST00000368407 ROCK2O75116 1388 aaKnown RBP36.35■■■■□ 3.41
EFNA1-202ENST00000368407 SCAF11Q99590 1463 aaKnown RBP36.34■■■■□ 3.41
EFNA1-202ENST00000368407 C14orf93Q9H972 538 aaKnown RBP36.34■■■■□ 3.41
EFNA1-202ENST00000368407 RBM19Q9Y4C8 960 aaKnown RBP36.34■■■■□ 3.41
EFNA1-202ENST00000368407 HSPA2P54652 639 aa36.33■■■■□ 3.41
EFNA1-202ENST00000368407 ANKLE2Q86XL3 938 aa36.32■■■■□ 3.4
EFNA1-202ENST00000368407 HIRIP3Q9BW71 556 aaPredicted RBP36.31■■■■□ 3.4
EFNA1-202ENST00000368407 PLEKHG1Q9ULL1 1385 aa36.3■■■■□ 3.4
EFNA1-202ENST00000368407 CARD11Q9BXL7 1154 aa36.29■■■■□ 3.4
EFNA1-202ENST00000368407 GPRASP1Q5JY77 1395 aa36.27■■■■□ 3.4
EFNA1-202ENST00000368407 NRXN3Q9Y4C0 1643 aa36.27■■■■□ 3.4
EFNA1-202ENST00000368407 KIAA1210Q9ULL0 1709 aa36.26■■■■□ 3.4
EFNA1-202ENST00000368407 SETBP1Q9Y6X0 1596 aa36.25■■■■□ 3.39
EFNA1-202ENST00000368407 TMEM132EQ6IEE7 984 aa36.25■■■■□ 3.39
EFNA1-202ENST00000368407 ALKQ9UM73 1620 aa36.25■■■■□ 3.39
EFNA1-202ENST00000368407 NCKAP5LQ9HCH0 1330 aa36.24■■■■□ 3.39
EFNA1-202ENST00000368407 IQGAP1P46940 1657 aa36.23■■■■□ 3.39
EFNA1-202ENST00000368407 POLR1AO95602 1720 aaPredicted RBP36.23■■■■□ 3.39
EFNA1-202ENST00000368407 ADAMTS13Q76LX8 1427 aa36.22■■■■□ 3.39
EFNA1-202ENST00000368407 SLC26A8Q96RN1 970 aa36.2■■■■□ 3.39
EFNA1-202ENST00000368407 ADGRB1O14514 1584 aa36.2■■■■□ 3.39
EFNA1-202ENST00000368407 LAMC1P11047 1609 aa36.2■■■■□ 3.38
EFNA1-202ENST00000368407 ASXL1Q8IXJ9 1541 aa36.19■■■■□ 3.38
EFNA1-202ENST00000368407 USP47Q96K76 1375 aa36.16■■■■□ 3.38
EFNA1-202ENST00000368407 SETD1AO15047 1707 aaKnown RBP36.15■■■■□ 3.38
EFNA1-202ENST00000368407 WASHC2AQ641Q2 1341 aa36.15■■■■□ 3.38
EFNA1-202ENST00000368407 METP08581 1390 aa36.15■■■■□ 3.38
EFNA1-202ENST00000368407 MED14O60244 1454 aa36.14■■■■□ 3.38
EFNA1-202ENST00000368407 HSPA5P11021 654 aaKnown RBP36.14■■■■□ 3.38
EFNA1-202ENST00000368407 EIF4G2P78344 907 aaKnown RBP eCLIP36.14■■■■□ 3.38
EFNA1-202ENST00000368407 NPHP4O75161 1426 aaPredicted RBP36.13■■■■□ 3.37
EFNA1-202ENST00000368407 FANCIQ9NVI1 1328 aa36.13■■■■□ 3.37
EFNA1-202ENST00000368407 TBX22Q9Y458 520 aa36.09■■■■□ 3.37
EFNA1-202ENST00000368407 HNRNPUQ00839 825 aaKnown RBP eCLIP36.08■■■■□ 3.377e-6■□□□□ 8.2
EFNA1-202ENST00000368407 STK26Q9P289 416 aa36.08■■■■□ 3.37
EFNA1-202ENST00000368407 TRAK1Q9UPV9 953 aa36.08■■■■□ 3.37
EFNA1-202ENST00000368407 YTHDC2Q9H6S0 1430 aaKnown RBP36.05■■■■□ 3.36
EFNA1-202ENST00000368407 ST20-MTHFSA0A0A6YYL1 179 aa36.03■■■■□ 3.36
EFNA1-202ENST00000368407 DIP2AQ14689 1571 aa36.03■■■■□ 3.36
EFNA1-202ENST00000368407 STRCQ7RTU9 1775 aa36.01■■■■□ 3.35
EFNA1-202ENST00000368407 LRPPRCP42704 1394 aaKnown RBP36■■■■□ 3.35
EFNA1-202ENST00000368407 CCDC7Q96M83 1385 aa36■■■■□ 3.35
EFNA1-202ENST00000368407 PTPRUQ92729 1446 aa35.99■■■■□ 3.35
EFNA1-202ENST00000368407 EIF3AQ14152 1382 aaKnown RBP35.95■■■■□ 3.35
EFNA1-202ENST00000368407 ABCC11Q96J66 1382 aa35.95■■■■□ 3.35
EFNA1-202ENST00000368407 AEBP2Q6ZN18 517 aaPredicted RBP35.94■■■■□ 3.34
EFNA1-202ENST00000368407 PPP4R2Q9NY27 417 aa35.93■■■■□ 3.34
EFNA1-202ENST00000368407 AMOTL2Q9Y2J4 779 aa35.92■■■■□ 3.34
EFNA1-202ENST00000368407 ZBED9Q6R2W3 1325 aa35.91■■■■□ 3.34
EFNA1-202ENST00000368407 PIK3R4Q99570 1358 aa35.91■■■■□ 3.34
EFNA1-202ENST00000368407 ARHGEF28Q8N1W1 1705 aaKnown RBP35.9■■■■□ 3.34
EFNA1-202ENST00000368407 TESK2Q96S53 571 aa35.89■■■■□ 3.34
EFNA1-202ENST00000368407 TECPR2O15040 1411 aa35.89■■■■□ 3.34
EFNA1-202ENST00000368407 PRAM1Q96QH2 718 aa35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms