RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 RBM33Q96EV2 1170 aaKnown RBP20.87■□□□□ 0.93
PMF1-202ENST00000368277 NWD1Q149M9 1564 aa20.86■□□□□ 0.93
PMF1-202ENST00000368277 CHD2O14647 1828 aaKnown RBP20.86■□□□□ 0.93
PMF1-202ENST00000368277 ZFYVE9O95405 1425 aa20.84■□□□□ 0.93
PMF1-202ENST00000368277 TMEM94Q12767 1356 aa20.83■□□□□ 0.92
PMF1-202ENST00000368277 RIMS2Q9UQ26 1411 aa20.82■□□□□ 0.92
PMF1-202ENST00000368277 ROBO1Q9Y6N7 1651 aa20.82■□□□□ 0.92
PMF1-202ENST00000368277 ROCK1Q13464 1354 aa20.82■□□□□ 0.92
PMF1-202ENST00000368277 BCANQ96GW7 911 aa20.81■□□□□ 0.92
PMF1-202ENST00000368277 SLC52A1Q9NWF4 448 aa20.81■□□□□ 0.92
PMF1-202ENST00000368277 SPHKAPQ2M3C7 1700 aa20.81■□□□□ 0.92
PMF1-202ENST00000368277 CHGAP10645 457 aaKnown RBP20.8■□□□□ 0.92
PMF1-202ENST00000368277 NUTM2DQ5VT03 806 aaPredicted RBP20.79■□□□□ 0.92
PMF1-202ENST00000368277 KCNA6P17658 529 aa20.78■□□□□ 0.92
PMF1-202ENST00000368277 NKTRP30414 1462 aaKnown RBP20.77■□□□□ 0.92
PMF1-202ENST00000368277 PLEKHG1Q9ULL1 1385 aa20.76■□□□□ 0.91
PMF1-202ENST00000368277 PROSER2Q86WR7 435 aaPredicted RBP20.76■□□□□ 0.91
PMF1-202ENST00000368277 NUP155O75694 1391 aa20.75■□□□□ 0.91
PMF1-202ENST00000368277 PPP1R15AO75807 674 aaPredicted RBP20.75■□□□□ 0.91
PMF1-202ENST00000368277 PHF23Q9BUL5 403 aaPredicted RBP20.73■□□□□ 0.91
PMF1-202ENST00000368277 PHLPP1O60346 1717 aa20.72■□□□□ 0.91
PMF1-202ENST00000368277 NRXN3Q9Y4C0 1643 aa20.71■□□□□ 0.91
PMF1-202ENST00000368277 ADAMTS13Q76LX8 1427 aa20.7■□□□□ 0.9
PMF1-202ENST00000368277 CLTCL1P53675 1640 aa20.69■□□□□ 0.9
PMF1-202ENST00000368277 FAM135BQ49AJ0 1406 aa20.69■□□□□ 0.9
PMF1-202ENST00000368277 DIP2AQ14689 1571 aa20.68■□□□□ 0.9
PMF1-202ENST00000368277 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.68■□□□□ 0.9
PMF1-202ENST00000368277 KIF1BO60333 1816 aa20.67■□□□□ 0.9
PMF1-202ENST00000368277 MSH6P52701 1360 aa20.66■□□□□ 0.9
PMF1-202ENST00000368277 RRBP1Q9P2E9 1410 aaKnown RBP20.66■□□□□ 0.9
PMF1-202ENST00000368277 TRPM2O94759 1503 aa20.64■□□□□ 0.9
PMF1-202ENST00000368277 PTPRUQ92729 1446 aa20.63■□□□□ 0.89
PMF1-202ENST00000368277 XRN1Q8IZH2 1706 aaKnown RBP20.62■□□□□ 0.89
PMF1-202ENST00000368277 HDGFP51858 240 aaKnown RBP20.62■□□□□ 0.89
PMF1-202ENST00000368277 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.62■□□□□ 0.89
PMF1-202ENST00000368277 TBX22Q9Y458 520 aa20.62■□□□□ 0.89
PMF1-202ENST00000368277 NAIPQ13075 1403 aa20.61■□□□□ 0.89
PMF1-202ENST00000368277 COL16A1Q07092 1604 aaPredicted RBP20.61■□□□□ 0.89
PMF1-202ENST00000368277 RGS17Q9UGC6 210 aaPredicted RBP20.6■□□□□ 0.89
PMF1-202ENST00000368277 SETBP1Q9Y6X0 1596 aa20.59■□□□□ 0.89
PMF1-202ENST00000368277 NEXMIFQ5QGS0 1516 aa20.59■□□□□ 0.89
PMF1-202ENST00000368277 C14orf37Q86TY3 774 aa20.58■□□□□ 0.89
PMF1-202ENST00000368277 ZNF326Q5BKZ1 582 aaKnown RBP20.57■□□□□ 0.88
PMF1-202ENST00000368277 SLAIN2Q9P270 581 aa20.57■□□□□ 0.88
PMF1-202ENST00000368277 SETD1AO15047 1707 aaKnown RBP20.55■□□□□ 0.88
PMF1-202ENST00000368277 NALCNQ8IZF0 1738 aa20.55■□□□□ 0.88
PMF1-202ENST00000368277 AMOTL2Q9Y2J4 779 aa20.54■□□□□ 0.88
PMF1-202ENST00000368277 PIK3R4Q99570 1358 aa20.54■□□□□ 0.88
PMF1-202ENST00000368277 PPLO60437 1756 aa20.51■□□□□ 0.87
PMF1-202ENST00000368277 METP08581 1390 aa20.51■□□□□ 0.87
PMF1-202ENST00000368277 AHDC1Q5TGY3 1603 aaPredicted RBP20.51■□□□□ 0.87
PMF1-202ENST00000368277 NCOA3Q9Y6Q9 1424 aa20.51■□□□□ 0.87
PMF1-202ENST00000368277 TRIM52Q96A61 297 aa20.5■□□□□ 0.87
PMF1-202ENST00000368277 SHPRHQ149N8 1683 aa20.5■□□□□ 0.87
PMF1-202ENST00000368277 POTEAQ6S8J7 498 aa20.49■□□□□ 0.87
PMF1-202ENST00000368277 HFM1A2PYH4 1435 aa20.49■□□□□ 0.87
PMF1-202ENST00000368277 LRP6O75581 1613 aa20.49■□□□□ 0.87
PMF1-202ENST00000368277 JCADQ9P266 1359 aa20.47■□□□□ 0.87
PMF1-202ENST00000368277 NHSL1Q5SYE7 1610 aa20.47■□□□□ 0.87
PMF1-202ENST00000368277 ATF3P18847 181 aa20.47■□□□□ 0.87
PMF1-202ENST00000368277 C19orf44Q9H6X5 657 aa20.46■□□□□ 0.87
PMF1-202ENST00000368277 ASXL1Q8IXJ9 1541 aa20.45■□□□□ 0.86
PMF1-202ENST00000368277 CADPS2Q86UW7 1296 aa20.45■□□□□ 0.86
PMF1-202ENST00000368277 FOXD1Q16676 465 aa20.43■□□□□ 0.86
PMF1-202ENST00000368277 MST1RQ04912 1400 aa20.43■□□□□ 0.86
PMF1-202ENST00000368277 BRINP3Q76B58 766 aa20.42■□□□□ 0.86
PMF1-202ENST00000368277 IFT172Q9UG01 1749 aa20.41■□□□□ 0.86
PMF1-202ENST00000368277 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
PMF1-202ENST00000368277 DCCP43146 1447 aa20.4■□□□□ 0.86
PMF1-202ENST00000368277 ADGRL3Q9HAR2 1447 aa20.4■□□□□ 0.86
PMF1-202ENST00000368277 DDX17Q92841 729 aaKnown RBP20.38■□□□□ 0.85
PMF1-202ENST00000368277 MEX3CQ5U5Q3 659 aaKnown RBP20.35■□□□□ 0.85
PMF1-202ENST00000368277 ROBO2Q9HCK4 1378 aa20.34■□□□□ 0.85
PMF1-202ENST00000368277 SPATA31A6Q5VVP1 1343 aa20.33■□□□□ 0.85
PMF1-202ENST00000368277 NUTM2BA6NNL0 878 aaPredicted RBP20.33■□□□□ 0.85
PMF1-202ENST00000368277 NUTM2EB1AL46 878 aaPredicted RBP20.33■□□□□ 0.85
PMF1-202ENST00000368277 NUTM2AQ8IVF1 878 aaPredicted RBP20.33■□□□□ 0.85
PMF1-202ENST00000368277 PTCH1Q13635 1447 aa20.32■□□□□ 0.84
PMF1-202ENST00000368277 VGFO15240 615 aaPredicted RBP20.3■□□□□ 0.84
PMF1-202ENST00000368277 C1orf167Q5SNV9 1468 aa20.3■□□□□ 0.84
PMF1-202ENST00000368277 SETD5Q9C0A6 1442 aa20.29■□□□□ 0.84
PMF1-202ENST00000368277 ADGRF5Q8IZF2 1346 aa20.28■□□□□ 0.84
PMF1-202ENST00000368277 LAMC1P11047 1609 aa20.28■□□□□ 0.84
PMF1-202ENST00000368277 CCDC144AA2RUR9 1427 aa20.27■□□□□ 0.84
PMF1-202ENST00000368277 RGL3Q3MIN7 710 aa20.27■□□□□ 0.84
PMF1-202ENST00000368277 KNDC1Q76NI1 1749 aa20.27■□□□□ 0.83
PMF1-202ENST00000368277 SPATA31E1Q6ZUB1 1445 aa20.27■□□□□ 0.83
PMF1-202ENST00000368277 RPGRIP1LQ68CZ1 1315 aa20.27■□□□□ 0.83
PMF1-202ENST00000368277 MPHOSPH9Q99550 1183 aa20.26■□□□□ 0.83
PMF1-202ENST00000368277 PNPLA6Q8IY17 1366 aa20.25■□□□□ 0.83
PMF1-202ENST00000368277 PRAG1Q86YV5 1406 aa20.25■□□□□ 0.83
PMF1-202ENST00000368277 ORAI2Q96SN7 254 aa20.24■□□□□ 0.83
PMF1-202ENST00000368277 RGPD8O14715 1765 aaPredicted RBP20.23■□□□□ 0.83
PMF1-202ENST00000368277 CDC42BPGQ6DT37 1551 aa20.23■□□□□ 0.83
PMF1-202ENST00000368277 AFF2P51816 1311 aa20.22■□□□□ 0.83
PMF1-202ENST00000368277 STK26Q9P289 416 aa20.21■□□□□ 0.83
PMF1-202ENST00000368277 FMN2Q9NZ56 1722 aa20.2■□□□□ 0.82
PMF1-202ENST00000368277 ZNF772Q68DY9 489 aaPredicted RBP20.2■□□□□ 0.82
PMF1-202ENST00000368277 LRRC59Q96AG4 307 aaKnown RBP20.2■□□□□ 0.82
PMF1-202ENST00000368277 TMEM132EQ6IEE7 984 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms