RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 CCDC144AA2RUR9 1427 aa16.62■□□□□ 0.25
NCSTN-202ENST00000368063 DYNC1I1O14576 645 aa16.62■□□□□ 0.25
NCSTN-202ENST00000368063 CANXP27824 592 aaKnown RBP16.61■□□□□ 0.25
NCSTN-202ENST00000368063 ZNF326Q5BKZ1 582 aaKnown RBP16.61■□□□□ 0.25
NCSTN-202ENST00000368063 ZNF521Q96K83 1311 aa16.61■□□□□ 0.25
NCSTN-202ENST00000368063 SLC4A1APQ9BWU0 796 aaKnown RBP16.6■□□□□ 0.25
NCSTN-202ENST00000368063 NCOA3Q9Y6Q9 1424 aa16.6■□□□□ 0.25
NCSTN-202ENST00000368063 SYNJ2O15056 1496 aa16.6■□□□□ 0.25
NCSTN-202ENST00000368063 NCLP19338 710 aaKnown RBP16.6■□□□□ 0.25
NCSTN-202ENST00000368063 KIAA0556O60303 1618 aa16.6■□□□□ 0.25
NCSTN-202ENST00000368063 PZPP20742 1482 aa16.6■□□□□ 0.25
NCSTN-202ENST00000368063 CCDC94Q9BW85 323 aaPredicted RBP16.59■□□□□ 0.25
NCSTN-202ENST00000368063 ROCK1Q13464 1354 aa16.59■□□□□ 0.25
NCSTN-202ENST00000368063 ZNF500O60304 480 aaPredicted RBP16.59■□□□□ 0.25
NCSTN-202ENST00000368063 DDIT3P35638 169 aa16.59■□□□□ 0.25
NCSTN-202ENST00000368063 ARID3AQ99856 593 aa16.59■□□□□ 0.25
NCSTN-202ENST00000368063 PER1O15534 1290 aaPredicted RBP16.58■□□□□ 0.24
NCSTN-202ENST00000368063 PPP4R3BQ5MIZ7 849 aa16.58■□□□□ 0.24
NCSTN-202ENST00000368063 SCAPERQ9BY12 1400 aa16.58■□□□□ 0.24
NCSTN-202ENST00000368063 ST20-MTHFSA0A0A6YYL1 179 aa16.57■□□□□ 0.24
NCSTN-202ENST00000368063 NASPP49321 788 aaPredicted RBP16.57■□□□□ 0.24
NCSTN-202ENST00000368063 EPRSP07814 1512 aaKnown RBP16.57■□□□□ 0.24
NCSTN-202ENST00000368063 CARD11Q9BXL7 1154 aa16.56■□□□□ 0.24
NCSTN-202ENST00000368063 CHMP4BQ9H444 224 aaKnown RBP16.56■□□□□ 0.24
NCSTN-202ENST00000368063 HS1BP3Q53T59 392 aa16.56■□□□□ 0.24
NCSTN-202ENST00000368063 CLASP1Q7Z460 1538 aa16.56■□□□□ 0.24
NCSTN-202ENST00000368063 DISP1Q96F81 1524 aa16.56■□□□□ 0.24
NCSTN-202ENST00000368063 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.55■□□□□ 0.24
NCSTN-202ENST00000368063 IPO4Q8TEX9 1081 aaKnown RBP16.55■□□□□ 0.24
NCSTN-202ENST00000368063 SKOR2Q2VWA4 1001 aaPredicted RBP16.54■□□□□ 0.24
NCSTN-202ENST00000368063 TMEM51Q9NW97 253 aa16.54■□□□□ 0.24
NCSTN-202ENST00000368063 NOL7Q9UMY1 257 aaKnown RBP16.54■□□□□ 0.24
NCSTN-202ENST00000368063 KIF20AO95235 890 aa16.54■□□□□ 0.24
NCSTN-202ENST00000368063 GOLGA2Q08379 1002 aa16.54■□□□□ 0.24
NCSTN-202ENST00000368063 TNPO1Q92973 898 aaKnown RBP16.53■□□□□ 0.24
NCSTN-202ENST00000368063 GTPBP4Q9BZE4 634 aaKnown RBP16.53■□□□□ 0.24
NCSTN-202ENST00000368063 CGNL1Q0VF96 1302 aa16.52■□□□□ 0.24
NCSTN-202ENST00000368063 XPCQ01831 940 aaPredicted RBP16.52■□□□□ 0.24
NCSTN-202ENST00000368063 SLFN5Q08AF3 891 aa16.52■□□□□ 0.24
NCSTN-202ENST00000368063 TRMT2AQ8IZ69 625 aaKnown RBP16.52■□□□□ 0.24
NCSTN-202ENST00000368063 ADAMTS8Q9UP79 889 aa16.52■□□□□ 0.24
NCSTN-202ENST00000368063 IBTKQ9P2D0 1353 aaPredicted RBP16.52■□□□□ 0.24
NCSTN-202ENST00000368063 TAF7LQ5H9L4 462 aa16.52■□□□□ 0.23
NCSTN-202ENST00000368063 CLUAP1Q96AJ1 413 aa16.52■□□□□ 0.23
NCSTN-202ENST00000368063 KIAA1107Q9UPP5 1409 aa16.52■□□□□ 0.23
NCSTN-202ENST00000368063 DAPK1P53355 1430 aa16.51■□□□□ 0.23
NCSTN-202ENST00000368063 NUP160Q12769 1436 aa16.51■□□□□ 0.23
NCSTN-202ENST00000368063 ARHGEF12Q9NZN5 1544 aa16.51■□□□□ 0.23
NCSTN-202ENST00000368063 RAPGEF6Q8TEU7 1601 aa16.51■□□□□ 0.23
NCSTN-202ENST00000368063 CEP170Q5SW79 1584 aa16.51■□□□□ 0.23
NCSTN-202ENST00000368063 BCAR3O75815 825 aa16.5■□□□□ 0.23
NCSTN-202ENST00000368063 SASS6Q6UVJ0 657 aa16.5■□□□□ 0.23
NCSTN-202ENST00000368063 ANP32BQ92688 251 aaKnown RBP16.5■□□□□ 0.23
NCSTN-202ENST00000368063 NKTRP30414 1462 aaKnown RBP16.5■□□□□ 0.23
NCSTN-202ENST00000368063 PTMSP20962 102 aa16.5■□□□□ 0.23
NCSTN-202ENST00000368063 TNNT2P45379 298 aaPredicted RBP16.49■□□□□ 0.23
NCSTN-202ENST00000368063 GBP4Q96PP9 640 aa16.49■□□□□ 0.23
NCSTN-202ENST00000368063 C22orf23Q9BZE7 217 aa16.49■□□□□ 0.23
NCSTN-202ENST00000368063 DNMT1P26358 1616 aaKnown RBP16.49■□□□□ 0.23
NCSTN-202ENST00000368063 LETM1O95202 739 aaPredicted RBP16.48■□□□□ 0.23
NCSTN-202ENST00000368063 CSPP1Q1MSJ5 1256 aa16.48■□□□□ 0.23
NCSTN-202ENST00000368063 CC2D1BQ5T0F9 858 aaKnown RBP16.48■□□□□ 0.23
NCSTN-202ENST00000368063 RAB3GAP1Q15042 981 aa16.48■□□□□ 0.23
NCSTN-202ENST00000368063 HSCBQ8IWL3 235 aa16.48■□□□□ 0.23
NCSTN-202ENST00000368063 CHMP7Q8WUX9 453 aaPredicted RBP16.48■□□□□ 0.23
NCSTN-202ENST00000368063 PDLIM2Q96JY6 352 aa16.48■□□□□ 0.23
NCSTN-202ENST00000368063 CIZ1Q9ULV3 898 aaPredicted RBP16.48■□□□□ 0.23
NCSTN-202ENST00000368063 PDE3AQ14432 1141 aa16.47■□□□□ 0.23
NCSTN-202ENST00000368063 NINLQ9Y2I6 1382 aa16.47■□□□□ 0.23
NCSTN-202ENST00000368063 ABCC5O15440 1437 aa16.46■□□□□ 0.23
NCSTN-202ENST00000368063 CARMIL2Q6F5E8 1435 aa16.46■□□□□ 0.23
NCSTN-202ENST00000368063 ZKSCAN5Q9Y2L8 839 aa16.46■□□□□ 0.23
NCSTN-202ENST00000368063 SMC5Q8IY18 1101 aa16.45■□□□□ 0.22
NCSTN-202ENST00000368063 PDZRN3Q9UPQ7 1066 aa16.45■□□□□ 0.22
NCSTN-202ENST00000368063 CDK13Q14004 1512 aaKnown RBP16.44■□□□□ 0.22
NCSTN-202ENST00000368063 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
NCSTN-202ENST00000368063 CAMSAP2Q08AD1 1489 aa16.44■□□□□ 0.22
NCSTN-202ENST00000368063 PANK3Q9H999 370 aa16.44■□□□□ 0.22
NCSTN-202ENST00000368063 MCM5P33992 734 aa16.43■□□□□ 0.22
NCSTN-202ENST00000368063 NUP153P49790 1475 aaKnown RBP16.43■□□□□ 0.22
NCSTN-202ENST00000368063 COL17A1Q9UMD9 1497 aaPredicted RBP16.43■□□□□ 0.22
NCSTN-202ENST00000368063 COG6Q9Y2V7 657 aa16.43■□□□□ 0.22
NCSTN-202ENST00000368063 PMFBP1Q8TBY8 1022 aa16.42■□□□□ 0.22
NCSTN-202ENST00000368063 PLXNC1O60486 1568 aa16.42■□□□□ 0.22
NCSTN-202ENST00000368063 MFAP1P55081 439 aaKnown RBP16.42■□□□□ 0.22
NCSTN-202ENST00000368063 ZNF710Q8N1W2 664 aa16.42■□□□□ 0.22
NCSTN-202ENST00000368063 SNX21Q969T3 373 aa16.42■□□□□ 0.22
NCSTN-202ENST00000368063 ARHGAP31Q2M1Z3 1444 aa16.42■□□□□ 0.22
NCSTN-202ENST00000368063 ZNF445P59923 1031 aa16.41■□□□□ 0.22
NCSTN-202ENST00000368063 KLHL40Q2TBA0 621 aa16.41■□□□□ 0.22
NCSTN-202ENST00000368063 PANK1Q8TE04 598 aa16.41■□□□□ 0.22
NCSTN-202ENST00000368063 ZNF830Q96NB3 372 aaPredicted RBP16.41■□□□□ 0.22
NCSTN-202ENST00000368063 ANKRD30AQ9BXX3 1397 aa16.41■□□□□ 0.22
NCSTN-202ENST00000368063 CBX1P83916 185 aa16.4■□□□□ 0.22
NCSTN-202ENST00000368063 MYRIPQ8NFW9 859 aa16.4■□□□□ 0.22
NCSTN-202ENST00000368063 PCDHB15Q9Y5E8 787 aa16.4■□□□□ 0.22
NCSTN-202ENST00000368063 ADCY10Q96PN6 1610 aa16.39■□□□□ 0.21
NCSTN-202ENST00000368063 WDR43Q15061 677 aaKnown RBP eCLIP16.38■□□□□ 0.21
NCSTN-202ENST00000368063 ATP2B3Q16720 1220 aa16.38■□□□□ 0.21
NCSTN-202ENST00000368063 SHROOM2Q13796 1616 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms