RNA–Protein interactions for RNA: ENST00000367063.6

CD55-203, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 1,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-203ENST00000367063 NEXMIFQ5QGS0 1516 aa29.23■■■□□ 2.27
CD55-203ENST00000367063 DCAF11Q8TEB1 546 aa29.23■■■□□ 2.27
CD55-203ENST00000367063 NUTM2DQ5VT03 806 aaPredicted RBP29.22■■■□□ 2.27
CD55-203ENST00000367063 ARHGAP23Q9P227 1491 aa29.22■■■□□ 2.27
CD55-203ENST00000367063 PPLO60437 1756 aa29.21■■■□□ 2.27
CD55-203ENST00000367063 ZFYVE9O95405 1425 aa29.21■■■□□ 2.27
CD55-203ENST00000367063 HDGFP51858 240 aaKnown RBP29.21■■■□□ 2.27
CD55-203ENST00000367063 IFT172Q9UG01 1749 aa29.2■■■□□ 2.27
CD55-203ENST00000367063 EID1Q9Y6B2 187 aa29.2■■■□□ 2.26
CD55-203ENST00000367063 TXNDC2Q86VQ3 553 aa29.19■■■□□ 2.26
CD55-203ENST00000367063 KDM2AQ9Y2K7 1162 aa29.19■■■□□ 2.26
CD55-203ENST00000367063 PPP1R15AO75807 674 aaPredicted RBP29.18■■■□□ 2.26
CD55-203ENST00000367063 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.18■■■□□ 2.26
CD55-203ENST00000367063 LTKP29376 864 aa29.17■■■□□ 2.26
CD55-203ENST00000367063 ANKLE2Q86XL3 938 aa29.17■■■□□ 2.26
CD55-203ENST00000367063 TIMELESSQ9UNS1 1208 aa29.17■■■□□ 2.26
CD55-203ENST00000367063 VGFO15240 615 aaPredicted RBP29.15■■■□□ 2.26
CD55-203ENST00000367063 SCAF11Q99590 1463 aaKnown RBP29.14■■■□□ 2.26
CD55-203ENST00000367063 STAC3Q96MF2 364 aa29.12■■■□□ 2.25
CD55-203ENST00000367063 MYOM2P54296 1465 aa29.12■■■□□ 2.25
CD55-203ENST00000367063 ADGRF5Q8IZF2 1346 aa29.12■■■□□ 2.25
CD55-203ENST00000367063 POLR1AO95602 1720 aaPredicted RBP29.11■■■□□ 2.25
CD55-203ENST00000367063 NCKAP5LQ9HCH0 1330 aa29.11■■■□□ 2.25
CD55-203ENST00000367063 SENP3Q9H4L4 574 aaPredicted RBP29.1■■■□□ 2.25
CD55-203ENST00000367063 BCANQ96GW7 911 aa29.08■■■□□ 2.25
CD55-203ENST00000367063 PLEKHG1Q9ULL1 1385 aa29.06■■■□□ 2.24
CD55-203ENST00000367063 STRCQ7RTU9 1775 aa29.04■■■□□ 2.24
CD55-203ENST00000367063 NRXN1Q9ULB1 1477 aa29.04■■■□□ 2.24
CD55-203ENST00000367063 PIK3C2GO75747 1445 aa29.03■■■□□ 2.24
CD55-203ENST00000367063 MED14O60244 1454 aa29.02■■■□□ 2.24
CD55-203ENST00000367063 PRAG1Q86YV5 1406 aa29.02■■■□□ 2.24
CD55-203ENST00000367063 NPHP4O75161 1426 aaPredicted RBP29.01■■■□□ 2.24
CD55-203ENST00000367063 IQGAP1P46940 1657 aa29■■■□□ 2.23
CD55-203ENST00000367063 SETBP1Q9Y6X0 1596 aa28.99■■■□□ 2.23
CD55-203ENST00000367063 NRXN3Q9Y4C0 1643 aa28.98■■■□□ 2.23
CD55-203ENST00000367063 NBPF8Q3BBV2 869 aa28.97■■■□□ 2.23
CD55-203ENST00000367063 SLC26A8Q96RN1 970 aa28.96■■■□□ 2.23
CD55-203ENST00000367063 ZEB1P37275 1124 aaPredicted RBP28.95■■■□□ 2.22
CD55-203ENST00000367063 CFAP70Q5T0N1 1121 aa28.95■■■□□ 2.22
CD55-203ENST00000367063 ADAMTS13Q76LX8 1427 aa28.95■■■□□ 2.22
CD55-203ENST00000367063 ALKQ9UM73 1620 aa28.94■■■□□ 2.22
CD55-203ENST00000367063 C14orf93Q9H972 538 aaKnown RBP28.93■■■□□ 2.22
CD55-203ENST00000367063 LAMC1P11047 1609 aa28.91■■■□□ 2.22
CD55-203ENST00000367063 DMRT2Q9Y5R5 561 aa28.9■■■□□ 2.22
CD55-203ENST00000367063 DIP2AQ14689 1571 aa28.9■■■□□ 2.22
CD55-203ENST00000367063 TBX22Q9Y458 520 aa28.89■■■□□ 2.22
CD55-203ENST00000367063 TRPM1Q7Z4N2 1603 aa28.89■■■□□ 2.22
CD55-203ENST00000367063 KIAA1210Q9ULL0 1709 aa28.89■■■□□ 2.22
CD55-203ENST00000367063 SETD1AO15047 1707 aaKnown RBP28.88■■■□□ 2.21
CD55-203ENST00000367063 NBPF1Q3BBV0 1214 aa28.86■■■□□ 2.21
CD55-203ENST00000367063 METP08581 1390 aa28.85■■■□□ 2.21
CD55-203ENST00000367063 TMEM132EQ6IEE7 984 aa28.85■■■□□ 2.21
CD55-203ENST00000367063 ROCK2O75116 1388 aaKnown RBP28.84■■■□□ 2.21
CD55-203ENST00000367063 RALGAPBQ86X10 1494 aa28.84■■■□□ 2.21
CD55-203ENST00000367063 ASXL1Q8IXJ9 1541 aa28.81■■■□□ 2.2
CD55-203ENST00000367063 ADGRB1O14514 1584 aa28.8■■■□□ 2.2
CD55-203ENST00000367063 PIK3R4Q99570 1358 aa28.78■■■□□ 2.2
CD55-203ENST00000367063 CARD11Q9BXL7 1154 aa28.77■■■□□ 2.2
CD55-203ENST00000367063 STK26Q9P289 416 aa28.76■■■□□ 2.19
CD55-203ENST00000367063 GPRASP1Q5JY77 1395 aa28.75■■■□□ 2.19
CD55-203ENST00000367063 PTPRUQ92729 1446 aa28.75■■■□□ 2.19
CD55-203ENST00000367063 YTHDC2Q9H6S0 1430 aaKnown RBP28.75■■■□□ 2.19
CD55-203ENST00000367063 CHD2O14647 1828 aaKnown RBP28.74■■■□□ 2.19
CD55-203ENST00000367063 AMOTL2Q9Y2J4 779 aa28.73■■■□□ 2.19
CD55-203ENST00000367063 LRPPRCP42704 1394 aaKnown RBP28.72■■■□□ 2.19
CD55-203ENST00000367063 KCNA6P17658 529 aa28.71■■■□□ 2.19
CD55-203ENST00000367063 TRAK1Q9UPV9 953 aa28.7■■■□□ 2.19
CD55-203ENST00000367063 ZNF335Q9H4Z2 1342 aaPredicted RBP28.69■■■□□ 2.18
CD55-203ENST00000367063 ABCC11Q96J66 1382 aa28.68■■■□□ 2.18
CD55-203ENST00000367063 XRN1Q8IZH2 1706 aaKnown RBP28.68■■■□□ 2.18
CD55-203ENST00000367063 NWD1Q149M9 1564 aa28.67■■■□□ 2.18
CD55-203ENST00000367063 KNDC1Q76NI1 1749 aa28.66■■■□□ 2.18
CD55-203ENST00000367063 STRCP1A6NGW2 1772 aa28.65■■■□□ 2.18
CD55-203ENST00000367063 TECPR2O15040 1411 aa28.65■■■□□ 2.18
CD55-203ENST00000367063 ROBO2Q9HCK4 1378 aa28.62■■■□□ 2.17
CD55-203ENST00000367063 CPS1P31327 1500 aa28.62■■■□□ 2.17
CD55-203ENST00000367063 ARHGEF28Q8N1W1 1705 aaKnown RBP28.61■■■□□ 2.17
CD55-203ENST00000367063 DLC1Q96QB1 1528 aa28.61■■■□□ 2.17
CD55-203ENST00000367063 PTCH1Q13635 1447 aa28.61■■■□□ 2.17
CD55-203ENST00000367063 EIF3AQ14152 1382 aaKnown RBP28.61■■■□□ 2.17
CD55-203ENST00000367063 USP47Q96K76 1375 aa28.61■■■□□ 2.17
CD55-203ENST00000367063 NKTRP30414 1462 aaKnown RBP28.6■■■□□ 2.17
CD55-203ENST00000367063 WAPLQ7Z5K2 1190 aa28.59■■■□□ 2.17
CD55-203ENST00000367063 PRAM1Q96QH2 718 aa28.59■■■□□ 2.17
CD55-203ENST00000367063 SIRT1Q96EB6 747 aa28.58■■■□□ 2.17
CD55-203ENST00000367063 POGKQ9P215 609 aa28.58■■■□□ 2.17
CD55-203ENST00000367063 FAM135BQ49AJ0 1406 aa28.57■■■□□ 2.16
CD55-203ENST00000367063 PROSER2Q86WR7 435 aaPredicted RBP28.57■■■□□ 2.16
CD55-203ENST00000367063 EIF4G2P78344 907 aaKnown RBP eCLIP28.56■■■□□ 2.16
CD55-203ENST00000367063 SAFB2Q14151 953 aaKnown RBP eCLIP28.55■■■□□ 2.16
CD55-203ENST00000367063 PLEKHH1Q9ULM0 1364 aa28.55■■■□□ 2.16
CD55-203ENST00000367063 RBM33Q96EV2 1170 aaKnown RBP28.54■■■□□ 2.16
CD55-203ENST00000367063 CENPJQ9HC77 1338 aaPredicted RBP28.54■■■□□ 2.16
CD55-203ENST00000367063 ST20-MTHFSA0A0A6YYL1 179 aa28.53■■■□□ 2.16
CD55-203ENST00000367063 LTBP4Q8N2S1 1624 aa28.51■■■□□ 2.15
CD55-203ENST00000367063 HSPA5P11021 654 aaKnown RBP28.51■■■□□ 2.15
CD55-203ENST00000367063 LRRC7Q96NW7 1537 aa28.5■■■□□ 2.15
CD55-203ENST00000367063 QRICH2Q9H0J4 1663 aa28.5■■■□□ 2.15
CD55-203ENST00000367063 TMEM94Q12767 1356 aa28.49■■■□□ 2.15
CD55-203ENST00000367063 C14orf37Q86TY3 774 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms