RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 TOP2BQ02880 1626 aa14.2□□□□□ -0.14
RD3-201ENST00000367002 TIAM1Q13009 1591 aa14.2□□□□□ -0.14
RD3-201ENST00000367002 CSB-PGBD3P0DP91 1061 aa14.19□□□□□ -0.14
RD3-201ENST00000367002 ZNF330Q9Y3S2 320 aaPredicted RBP14.19□□□□□ -0.14
RD3-201ENST00000367002 NAIPQ13075 1403 aa14.19□□□□□ -0.14
RD3-201ENST00000367002 C11orf95C9JLR9 678 aaPredicted RBP14.19□□□□□ -0.14
RD3-201ENST00000367002 FOXD4L6Q3SYB3 417 aaPredicted RBP14.19□□□□□ -0.14
RD3-201ENST00000367002 FOXD4L3Q6VB84 417 aaPredicted RBP14.19□□□□□ -0.14
RD3-201ENST00000367002 GPATCH3Q96I76 525 aa14.18□□□□□ -0.14
RD3-201ENST00000367002 BACH2Q9BYV9 841 aa14.18□□□□□ -0.14
RD3-201ENST00000367002 C22orf23Q9BZE7 217 aa14.18□□□□□ -0.14
RD3-201ENST00000367002 SKOR2Q2VWA4 1001 aaPredicted RBP14.18□□□□□ -0.14
RD3-201ENST00000367002 EID1Q9Y6B2 187 aa14.18□□□□□ -0.14
RD3-201ENST00000367002 KIAA1107Q9UPP5 1409 aa14.18□□□□□ -0.14
RD3-201ENST00000367002 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
RD3-201ENST00000367002 API5Q9BZZ5 524 aaKnown RBP14.18□□□□□ -0.14
RD3-201ENST00000367002 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.18□□□□□ -0.14
RD3-201ENST00000367002 HTATSF1O43719 755 aaKnown RBP14.17□□□□□ -0.14
RD3-201ENST00000367002 GNL2Q13823 731 aaKnown RBP14.17□□□□□ -0.14
RD3-201ENST00000367002 KIF16BQ96L93 1317 aa14.17□□□□□ -0.14
RD3-201ENST00000367002 NPHP1O15259 732 aa14.17□□□□□ -0.14
RD3-201ENST00000367002 AAMPQ13685 434 aa14.16□□□□□ -0.14
RD3-201ENST00000367002 BCAR3O75815 825 aa14.16□□□□□ -0.14
RD3-201ENST00000367002 CHMP3Q9Y3E7 222 aa14.16□□□□□ -0.14
RD3-201ENST00000367002 HMOX1P09601 288 aa14.15□□□□□ -0.14
RD3-201ENST00000367002 REC8O95072 547 aa14.15□□□□□ -0.14
RD3-201ENST00000367002 RSPH6AQ9H0K4 717 aa14.15□□□□□ -0.14
RD3-201ENST00000367002 CABP2Q9NPB3 220 aa14.15□□□□□ -0.14
RD3-201ENST00000367002 SMG6Q86US8 1419 aaKnown RBP14.14□□□□□ -0.15
RD3-201ENST00000367002 GORABQ5T7V8 394 aa14.14□□□□□ -0.15
RD3-201ENST00000367002 EFCAB5A4FU69 1503 aa14.14□□□□□ -0.15
RD3-201ENST00000367002 PRG4Q92954 1404 aaPredicted RBP14.14□□□□□ -0.15
RD3-201ENST00000367002 PDE3AQ14432 1141 aa14.14□□□□□ -0.15
RD3-201ENST00000367002 FRAT2O75474 233 aaPredicted RBP14.13□□□□□ -0.15
RD3-201ENST00000367002 SLC12A5Q9H2X9 1139 aa14.13□□□□□ -0.15
RD3-201ENST00000367002 PHF14O94880 888 aa14.13□□□□□ -0.15
RD3-201ENST00000367002 CSPP1Q1MSJ5 1256 aa14.13□□□□□ -0.15
RD3-201ENST00000367002 GRIN2BQ13224 1484 aa14.13□□□□□ -0.15
RD3-201ENST00000367002 GNAI1P63096 354 aa14.12□□□□□ -0.15
RD3-201ENST00000367002 TULP1O00294 542 aaPredicted RBP14.12□□□□□ -0.15
RD3-201ENST00000367002 HSP90B1P14625 803 aaKnown RBP14.12□□□□□ -0.15
RD3-201ENST00000367002 POLA1P09884 1462 aaPredicted RBP14.12□□□□□ -0.15
RD3-201ENST00000367002 HSP90AA2PQ14568 343 aaPredicted RBP14.11□□□□□ -0.15
RD3-201ENST00000367002 NECTIN2Q92692 538 aa14.11□□□□□ -0.15
RD3-201ENST00000367002 PDZRN3Q9UPQ7 1066 aa14.11□□□□□ -0.15
RD3-201ENST00000367002 PRDM2Q13029 1718 aa14.11□□□□□ -0.15
RD3-201ENST00000367002 EXOSC9Q06265 439 aaKnown RBP14.1□□□□□ -0.15
RD3-201ENST00000367002 C9orf84Q5VXU9 1444 aa14.1□□□□□ -0.15
RD3-201ENST00000367002 TEFQ10587 303 aa14.1□□□□□ -0.15
RD3-201ENST00000367002 ANO2Q9NQ90 1003 aa14.1□□□□□ -0.15
RD3-201ENST00000367002 TROQ12816 1431 aaPredicted RBP14.1□□□□□ -0.15
RD3-201ENST00000367002 EHBP1L1Q8N3D4 1523 aa14.1□□□□□ -0.15
RD3-201ENST00000367002 EIF2S2P20042 333 aaKnown RBP14.1□□□□□ -0.15
RD3-201ENST00000367002 FKBP5Q13451 457 aaPredicted RBP14.09□□□□□ -0.15
RD3-201ENST00000367002 MSH5O43196 834 aa14.09□□□□□ -0.15
RD3-201ENST00000367002 ATP6V1DQ9Y5K8 247 aa14.09□□□□□ -0.15
RD3-201ENST00000367002 TOPBP1Q92547 1522 aa14.08□□□□□ -0.15
RD3-201ENST00000367002 DAPK1P53355 1430 aa14.08□□□□□ -0.16
RD3-201ENST00000367002 TAF7LQ5H9L4 462 aa14.08□□□□□ -0.16
RD3-201ENST00000367002 TSR2Q969E8 191 aaKnown RBP14.07□□□□□ -0.16
RD3-201ENST00000367002 DIAPH3Q9NSV4 1193 aa14.07□□□□□ -0.16
RD3-201ENST00000367002 BRPF3Q9ULD4 1205 aa14.07□□□□□ -0.16
RD3-201ENST00000367002 ANKRD30BQ9BXX2 1392 aa14.07□□□□□ -0.16
RD3-201ENST00000367002 INTS3Q68E01 1043 aaKnown RBP14.07□□□□□ -0.16
RD3-201ENST00000367002 CYB5RLQ6IPT4 315 aa14.07□□□□□ -0.16
RD3-201ENST00000367002 NUCB2P80303 420 aa14.07□□□□□ -0.16
RD3-201ENST00000367002 BICRAQ9NZM4 1560 aa14.06□□□□□ -0.16
RD3-201ENST00000367002 C9orf78Q9NZ63 289 aaPredicted RBP14.06□□□□□ -0.16
RD3-201ENST00000367002 KIF3AQ9Y496 699 aa14.05□□□□□ -0.16
RD3-201ENST00000367002 PRKAR2BP31323 418 aa14.05□□□□□ -0.16
RD3-201ENST00000367002 TRAK2O60296 914 aa14.05□□□□□ -0.16
RD3-201ENST00000367002 SF3A1Q15459 793 aaKnown RBP14.05□□□□□ -0.16
RD3-201ENST00000367002 CCDC9Q9Y3X0 531 aaKnown RBP14.05□□□□□ -0.16
RD3-201ENST00000367002 IL27Q8NEV9 243 aa14.04□□□□□ -0.16
RD3-201ENST00000367002 TSPYL4Q9UJ04 414 aa14.04□□□□□ -0.16
RD3-201ENST00000367002 ZKSCAN1P17029 563 aaPredicted RBP14.04□□□□□ -0.16
RD3-201ENST00000367002 CDC45O75419 566 aa14.03□□□□□ -0.16
RD3-201ENST00000367002 MCTP1Q6DN14 999 aa14.03□□□□□ -0.16
RD3-201ENST00000367002 RUFY2Q8WXA3 655 aa14.03□□□□□ -0.16
RD3-201ENST00000367002 ROCK1Q13464 1354 aa14.03□□□□□ -0.16
RD3-201ENST00000367002 SYNJ2O15056 1496 aa14.03□□□□□ -0.16
RD3-201ENST00000367002 MRE11P49959 708 aa14.03□□□□□ -0.16
RD3-201ENST00000367002 SKAP1Q86WV1 359 aa14.03□□□□□ -0.16
RD3-201ENST00000367002 ARHGAP5Q13017 1502 aa14.03□□□□□ -0.16
RD3-201ENST00000367002 H3BQV1 296 aa14.02□□□□□ -0.16
RD3-201ENST00000367002 TPM4P67936 248 aa14.02□□□□□ -0.16
RD3-201ENST00000367002 IFFO2Q5TF58 517 aa14.02□□□□□ -0.16
RD3-201ENST00000367002 C1orf141Q5JVX7 400 aa14.02□□□□□ -0.16
RD3-201ENST00000367002 FAM184AQ8NB25 1140 aa14.02□□□□□ -0.16
RD3-201ENST00000367002 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.02□□□□□ -0.16
RD3-201ENST00000367002 ERBINQ96RT1 1412 aa14.02□□□□□ -0.17
RD3-201ENST00000367002 EPRSP07814 1512 aaKnown RBP14.01□□□□□ -0.17
RD3-201ENST00000367002 SLFN5Q08AF3 891 aa14.01□□□□□ -0.17
RD3-201ENST00000367002 OSCARQ8IYS5 282 aa14.01□□□□□ -0.17
RD3-201ENST00000367002 FAM43AQ8N2R8 423 aa14.01□□□□□ -0.17
RD3-201ENST00000367002 C1orf115Q9H7X2 142 aa14.01□□□□□ -0.17
RD3-201ENST00000367002 C20orf194Q5TEA3 1177 aa14.01□□□□□ -0.17
RD3-201ENST00000367002 NOB1Q9ULX3 412 aaKnown RBP14.01□□□□□ -0.17
RD3-201ENST00000367002 HMGXB3Q12766 1538 aa14□□□□□ -0.17
RD3-201ENST00000367002 IFIT2P09913 472 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms