RNA–Protein interactions for RNA: ENST00000366860.9

CNIH4-204, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3

Gene CNIH4, Length 912 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-204ENST00000366860 CHGAP10645 457 aaKnown RBP22.55■■□□□ 1.2
CNIH4-204ENST00000366860 SLIT1O75093 1534 aa22.53■■□□□ 1.2
CNIH4-204ENST00000366860 RPGRIP1LQ68CZ1 1315 aa22.53■■□□□ 1.2
CNIH4-204ENST00000366860 ZNF326Q5BKZ1 582 aaKnown RBP22.51■■□□□ 1.19
CNIH4-204ENST00000366860 STAC3Q96MF2 364 aa22.51■■□□□ 1.19
CNIH4-204ENST00000366860 ARHGAP23Q9P227 1491 aa22.49■■□□□ 1.19
CNIH4-204ENST00000366860 RGL3Q3MIN7 710 aa22.49■■□□□ 1.19
CNIH4-204ENST00000366860 ZFYVE9O95405 1425 aa22.48■■□□□ 1.19
CNIH4-204ENST00000366860 POLR1AO95602 1720 aaPredicted RBP22.48■■□□□ 1.19
CNIH4-204ENST00000366860 L3MBTL2Q969R5 705 aa22.48■■□□□ 1.19
CNIH4-204ENST00000366860 LAMC1P11047 1609 aa22.48■■□□□ 1.19
CNIH4-204ENST00000366860 TMEM2Q9UHN6 1383 aa22.48■■□□□ 1.19
CNIH4-204ENST00000366860 RIMS2Q9UQ26 1411 aa22.48■■□□□ 1.19
CNIH4-204ENST00000366860 THEMISQ8N1K5 641 aaPredicted RBP22.46■■□□□ 1.19
CNIH4-204ENST00000366860 NRXN1Q9ULB1 1477 aa22.46■■□□□ 1.19
CNIH4-204ENST00000366860 KIAA1210Q9ULL0 1709 aa22.45■■□□□ 1.19
CNIH4-204ENST00000366860 LMTK3Q96Q04 1460 aa22.45■■□□□ 1.18
CNIH4-204ENST00000366860 DCAF11Q8TEB1 546 aa22.44■■□□□ 1.18
CNIH4-204ENST00000366860 PRAG1Q86YV5 1406 aa22.43■■□□□ 1.18
CNIH4-204ENST00000366860 HDGFP51858 240 aaKnown RBP22.43■■□□□ 1.18
CNIH4-204ENST00000366860 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.43■■□□□ 1.18
CNIH4-204ENST00000366860 SCAF11Q99590 1463 aaKnown RBP22.42■■□□□ 1.18
CNIH4-204ENST00000366860 TRPM1Q7Z4N2 1603 aa22.42■■□□□ 1.18
CNIH4-204ENST00000366860 PIK3C2GO75747 1445 aa22.41■■□□□ 1.18
CNIH4-204ENST00000366860 VGFO15240 615 aaPredicted RBP22.4■■□□□ 1.18
CNIH4-204ENST00000366860 SETBP1Q9Y6X0 1596 aa22.4■■□□□ 1.18
CNIH4-204ENST00000366860 IQGAP1P46940 1657 aa22.39■■□□□ 1.17
CNIH4-204ENST00000366860 PPP1R15AO75807 674 aaPredicted RBP22.38■■□□□ 1.17
CNIH4-204ENST00000366860 EID1Q9Y6B2 187 aa22.38■■□□□ 1.17
CNIH4-204ENST00000366860 RALGAPBQ86X10 1494 aa22.38■■□□□ 1.17
CNIH4-204ENST00000366860 DIP2AQ14689 1571 aa22.38■■□□□ 1.17
CNIH4-204ENST00000366860 NRXN3Q9Y4C0 1643 aa22.36■■□□□ 1.17
CNIH4-204ENST00000366860 KDM2AQ9Y2K7 1162 aa22.36■■□□□ 1.17
CNIH4-204ENST00000366860 PLEKHG1Q9ULL1 1385 aa22.36■■□□□ 1.17
CNIH4-204ENST00000366860 SETD1AO15047 1707 aaKnown RBP22.34■■□□□ 1.17
CNIH4-204ENST00000366860 ADGRF5Q8IZF2 1346 aa22.32■■□□□ 1.16
CNIH4-204ENST00000366860 MED14O60244 1454 aa22.31■■□□□ 1.16
CNIH4-204ENST00000366860 ANKLE2Q86XL3 938 aa22.31■■□□□ 1.16
CNIH4-204ENST00000366860 TXNDC2Q86VQ3 553 aa22.3■■□□□ 1.16
CNIH4-204ENST00000366860 ALKQ9UM73 1620 aa22.3■■□□□ 1.16
CNIH4-204ENST00000366860 NUTM2DQ5VT03 806 aaPredicted RBP22.28■■□□□ 1.16
CNIH4-204ENST00000366860 PPP4R3CPQ6ZMV5 832 aa22.27■■□□□ 1.16
CNIH4-204ENST00000366860 ROCK2O75116 1388 aaKnown RBP22.26■■□□□ 1.15
CNIH4-204ENST00000366860 GPRASP1Q5JY77 1395 aa22.26■■□□□ 1.15
CNIH4-204ENST00000366860 NPHP4O75161 1426 aaPredicted RBP22.26■■□□□ 1.15
CNIH4-204ENST00000366860 LTKP29376 864 aa22.26■■□□□ 1.15
CNIH4-204ENST00000366860 NBPF8Q3BBV2 869 aa22.26■■□□□ 1.15
CNIH4-204ENST00000366860 ADGRB1O14514 1584 aa22.25■■□□□ 1.15
CNIH4-204ENST00000366860 STRCQ7RTU9 1775 aa22.25■■□□□ 1.15
CNIH4-204ENST00000366860 ADAMTS13Q76LX8 1427 aa22.24■■□□□ 1.15
CNIH4-204ENST00000366860 ASXL1Q8IXJ9 1541 aa22.24■■□□□ 1.15
CNIH4-204ENST00000366860 KNDC1Q76NI1 1749 aa22.23■■□□□ 1.15
CNIH4-204ENST00000366860 C14orf93Q9H972 538 aaKnown RBP22.22■■□□□ 1.15
CNIH4-204ENST00000366860 HSPA2P54652 639 aa22.2■■□□□ 1.14
CNIH4-204ENST00000366860 BCANQ96GW7 911 aa22.2■■□□□ 1.14
CNIH4-204ENST00000366860 CFAP70Q5T0N1 1121 aa22.19■■□□□ 1.14
CNIH4-204ENST00000366860 PIK3R4Q99570 1358 aa22.18■■□□□ 1.14
CNIH4-204ENST00000366860 ARHGEF28Q8N1W1 1705 aaKnown RBP22.17■■□□□ 1.14
CNIH4-204ENST00000366860 EIF3AQ14152 1382 aaKnown RBP22.17■■□□□ 1.14
CNIH4-204ENST00000366860 CARD11Q9BXL7 1154 aa22.16■■□□□ 1.14
CNIH4-204ENST00000366860 XRN1Q8IZH2 1706 aaKnown RBP22.16■■□□□ 1.14
CNIH4-204ENST00000366860 CPS1P31327 1500 aa22.16■■□□□ 1.14
CNIH4-204ENST00000366860 NCKAP5LQ9HCH0 1330 aa22.15■■□□□ 1.14
CNIH4-204ENST00000366860 NWD1Q149M9 1564 aa22.15■■□□□ 1.14
CNIH4-204ENST00000366860 DLC1Q96QB1 1528 aa22.15■■□□□ 1.14
CNIH4-204ENST00000366860 CHD2O14647 1828 aaKnown RBP22.15■■□□□ 1.14
CNIH4-204ENST00000366860 YTHDC2Q9H6S0 1430 aaKnown RBP22.14■■□□□ 1.14
CNIH4-204ENST00000366860 TBX22Q9Y458 520 aa22.14■■□□□ 1.13
CNIH4-204ENST00000366860 USP47Q96K76 1375 aa22.12■■□□□ 1.13
CNIH4-204ENST00000366860 NBPF1Q3BBV0 1214 aa22.12■■□□□ 1.13
CNIH4-204ENST00000366860 TECPR2O15040 1411 aa22.12■■□□□ 1.13
CNIH4-204ENST00000366860 LRPPRCP42704 1394 aaKnown RBP22.12■■□□□ 1.13
CNIH4-204ENST00000366860 METP08581 1390 aa22.11■■□□□ 1.13
CNIH4-204ENST00000366860 PTCH1Q13635 1447 aa22.09■■□□□ 1.13
CNIH4-204ENST00000366860 SLC26A8Q96RN1 970 aa22.09■■□□□ 1.13
CNIH4-204ENST00000366860 QRICH2Q9H0J4 1663 aa22.09■■□□□ 1.13
CNIH4-204ENST00000366860 KCNA4P22459 653 aa22.08■■□□□ 1.13
CNIH4-204ENST00000366860 DMRT2Q9Y5R5 561 aa22.08■■□□□ 1.13
CNIH4-204ENST00000366860 EIF4G2P78344 907 aaKnown RBP eCLIP22.07■■□□□ 1.12
CNIH4-204ENST00000366860 ABCC11Q96J66 1382 aa22.07■■□□□ 1.12
CNIH4-204ENST00000366860 NKTRP30414 1462 aaKnown RBP22.07■■□□□ 1.12
CNIH4-204ENST00000366860 TMEM132EQ6IEE7 984 aa22.06■■□□□ 1.12
CNIH4-204ENST00000366860 FAM135BQ49AJ0 1406 aa22.05■■□□□ 1.12
CNIH4-204ENST00000366860 PTPRUQ92729 1446 aa22.04■■□□□ 1.12
CNIH4-204ENST00000366860 SBNO2Q9Y2G9 1366 aa22.01■■□□□ 1.11
CNIH4-204ENST00000366860 STK26Q9P289 416 aa21.99■■□□□ 1.11
CNIH4-204ENST00000366860 TRAK1Q9UPV9 953 aa21.99■■□□□ 1.11
CNIH4-204ENST00000366860 CENPJQ9HC77 1338 aaPredicted RBP21.99■■□□□ 1.11
CNIH4-204ENST00000366860 STRCP1A6NGW2 1772 aa21.99■■□□□ 1.11
CNIH4-204ENST00000366860 ADGRB2O60241 1585 aa21.99■■□□□ 1.11
CNIH4-204ENST00000366860 SIRT1Q96EB6 747 aa21.98■■□□□ 1.11
CNIH4-204ENST00000366860 HSPA5P11021 654 aaKnown RBP21.97■■□□□ 1.11
CNIH4-204ENST00000366860 KCNA6P17658 529 aa21.97■■□□□ 1.11
CNIH4-204ENST00000366860 AMOTL2Q9Y2J4 779 aa21.97■■□□□ 1.11
CNIH4-204ENST00000366860 SLC24A1O60721 1099 aa21.96■■□□□ 1.11
CNIH4-204ENST00000366860 ROBO2Q9HCK4 1378 aa21.96■■□□□ 1.11
CNIH4-204ENST00000366860 POGKQ9P215 609 aa21.94■■□□□ 1.1
CNIH4-204ENST00000366860 ST20-MTHFSA0A0A6YYL1 179 aa21.93■■□□□ 1.1
CNIH4-204ENST00000366860 NALCNQ8IZF0 1738 aa21.93■■□□□ 1.1
CNIH4-204ENST00000366860 PRAM1Q96QH2 718 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms