RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 RGS20O76081 388 aa14.85□□□□□ -0.03
H3F3A-201ENST00000366813 SWT1Q5T5J6 900 aaKnown RBP14.85□□□□□ -0.03
H3F3A-201ENST00000366813 EYA1Q99502 592 aa14.85□□□□□ -0.03
H3F3A-201ENST00000366813 FCHSD2O94868 740 aa14.84□□□□□ -0.03
H3F3A-201ENST00000366813 SLF2Q8IX21 1173 aa14.84□□□□□ -0.03
H3F3A-201ENST00000366813 NECTIN2Q92692 538 aa14.84□□□□□ -0.03
H3F3A-201ENST00000366813 RBM46Q8TBY0 533 aaKnown RBP14.83□□□□□ -0.04
H3F3A-201ENST00000366813 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
H3F3A-201ENST00000366813 TESPA1A2RU30 521 aaPredicted RBP14.8□□□□□ -0.04
H3F3A-201ENST00000366813 RBM26Q5T8P6 1007 aaKnown RBP14.77□□□□□ -0.04
H3F3A-201ENST00000366813 DNAJB2P25686 324 aa14.76□□□□□ -0.05
H3F3A-201ENST00000366813 ADGRG1Q9Y653 693 aa14.76□□□□□ -0.05
H3F3A-201ENST00000366813 ATAD2BQ9ULI0 1458 aa14.76□□□□□ -0.05
H3F3A-201ENST00000366813 APLP1P51693 650 aa14.74□□□□□ -0.05
H3F3A-201ENST00000366813 FAM161AQ3B820 660 aa14.74□□□□□ -0.05
H3F3A-201ENST00000366813 TJAP1Q5JTD0 557 aa14.74□□□□□ -0.05
H3F3A-201ENST00000366813 MTRQ99707 1265 aa14.74□□□□□ -0.05
H3F3A-201ENST00000366813 IL21Q9HBE4 155 aa14.74□□□□□ -0.05
H3F3A-201ENST00000366813 HIC1Q14526 733 aa14.72□□□□□ -0.05
H3F3A-201ENST00000366813 RCCD1A6NED2 376 aa14.7□□□□□ -0.06
H3F3A-201ENST00000366813 OATP04181 439 aa14.69□□□□□ -0.06
H3F3A-201ENST00000366813 BAZ1AQ9NRL2 1556 aaPredicted RBP14.69□□□□□ -0.06
H3F3A-201ENST00000366813 BCANQ96GW7 911 aa14.68□□□□□ -0.06
H3F3A-201ENST00000366813 PRR14Q9BWN1 585 aa14.68□□□□□ -0.06
H3F3A-201ENST00000366813 TMEM134Q9H6X4 195 aa14.68□□□□□ -0.06
H3F3A-201ENST00000366813 KIF21AQ7Z4S6 1674 aa14.67□□□□□ -0.06
H3F3A-201ENST00000366813 COPS2P61201 443 aa14.66□□□□□ -0.06
H3F3A-201ENST00000366813 ZNF516Q92618 1163 aa14.66□□□□□ -0.06
H3F3A-201ENST00000366813 IRX2Q9BZI1 471 aaPredicted RBP14.66□□□□□ -0.06
H3F3A-201ENST00000366813 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.65□□□□□ -0.06
H3F3A-201ENST00000366813 GNPATO15228 680 aa14.65□□□□□ -0.06
H3F3A-201ENST00000366813 HMGXB3Q12766 1538 aa14.64□□□□□ -0.07
H3F3A-201ENST00000366813 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
H3F3A-201ENST00000366813 PDS5BQ9NTI5 1447 aa14.64□□□□□ -0.07
H3F3A-201ENST00000366813 TULP1O00294 542 aaPredicted RBP14.62□□□□□ -0.07
H3F3A-201ENST00000366813 PXYLP1Q8TE99 480 aa14.62□□□□□ -0.07
H3F3A-201ENST00000366813 PCDHB3Q9Y5E6 796 aa14.62□□□□□ -0.07
H3F3A-201ENST00000366813 RIMBP3CA6NJZ7 1639 aa14.61□□□□□ -0.07
H3F3A-201ENST00000366813 RIMBP3BA6NNM3 1639 aa14.61□□□□□ -0.07
H3F3A-201ENST00000366813 RIMBP3Q9UFD9 1639 aa14.61□□□□□ -0.07
H3F3A-201ENST00000366813 KMT5BQ4FZB7 885 aa14.61□□□□□ -0.07
H3F3A-201ENST00000366813 RSPH4AQ5TD94 716 aa14.6□□□□□ -0.07
H3F3A-201ENST00000366813 FECHP22830 423 aa14.59□□□□□ -0.07
H3F3A-201ENST00000366813 GPIHBP1Q8IV16 184 aa14.59□□□□□ -0.07
H3F3A-201ENST00000366813 PPP1R18Q6NYC8 613 aa14.58□□□□□ -0.08
H3F3A-201ENST00000366813 METTL3Q86U44 580 aaKnown RBP14.57□□□□□ -0.08
H3F3A-201ENST00000366813 NKX2-3Q8TAU0 364 aa14.57□□□□□ -0.08
H3F3A-201ENST00000366813 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.56□□□□□ -0.08
H3F3A-201ENST00000366813 MRC2Q9UBG0 1479 aa14.56□□□□□ -0.08
H3F3A-201ENST00000366813 ZPR1O75312 459 aa14.55□□□□□ -0.08
H3F3A-201ENST00000366813 CFHP08603 1231 aa14.55□□□□□ -0.08
H3F3A-201ENST00000366813 GGCXP38435 758 aa14.55□□□□□ -0.08
H3F3A-201ENST00000366813 CYB5RLQ6IPT4 315 aa14.55□□□□□ -0.08
H3F3A-201ENST00000366813 BAZ1BQ9UIG0 1483 aaKnown RBP14.55□□□□□ -0.08
H3F3A-201ENST00000366813 ACTN4O43707 911 aaKnown RBP14.53□□□□□ -0.08
H3F3A-201ENST00000366813 BLOC1S3Q6QNY0 202 aa14.53□□□□□ -0.08
H3F3A-201ENST00000366813 WDR62O43379 1518 aa14.52□□□□□ -0.08
H3F3A-201ENST00000366813 GPR37O15354 613 aa14.52□□□□□ -0.08
H3F3A-201ENST00000366813 SLC10A3P09131 477 aa14.52□□□□□ -0.08
H3F3A-201ENST00000366813 PRKD2Q9BZL6 878 aa14.5□□□□□ -0.09
H3F3A-201ENST00000366813 ARHGEF11O15085 1522 aa14.5□□□□□ -0.09
H3F3A-201ENST00000366813 DAXXQ9UER7 740 aaPredicted RBP14.48□□□□□ -0.09
H3F3A-201ENST00000366813 SMARCA4P51532 1647 aa14.47□□□□□ -0.09
H3F3A-201ENST00000366813 RDH13Q8NBN7 331 aa14.46□□□□□ -0.09
H3F3A-201ENST00000366813 TMUB1Q9BVT8 246 aa14.45□□□□□ -0.1
H3F3A-201ENST00000366813 DDX11L8A8MPP1 907 aa14.44□□□□□ -0.1
H3F3A-201ENST00000366813 NR1I2O75469 434 aa14.44□□□□□ -0.1
H3F3A-201ENST00000366813 CADPSQ9ULU8 1353 aa14.44□□□□□ -0.1
H3F3A-201ENST00000366813 NLRP7Q8WX94 980 aa14.43□□□□□ -0.1
H3F3A-201ENST00000366813 V9GY48 417 aaPredicted RBP14.41□□□□□ -0.1
H3F3A-201ENST00000366813 SULF1Q8IWU6 871 aa14.41□□□□□ -0.1
H3F3A-201ENST00000366813 TLL1O43897 1013 aa14.4□□□□□ -0.1
H3F3A-201ENST00000366813 PUS10Q3MIT2 529 aaKnown RBP14.39□□□□□ -0.11
H3F3A-201ENST00000366813 Q6ZNB5 142 aa14.39□□□□□ -0.11
H3F3A-201ENST00000366813 PHOX2BQ99453 314 aa14.39□□□□□ -0.11
H3F3A-201ENST00000366813 GFRA3O60609 400 aa14.38□□□□□ -0.11
H3F3A-201ENST00000366813 LAPTM4AQ15012 233 aa14.38□□□□□ -0.11
H3F3A-201ENST00000366813 SCUBE3Q8IX30 993 aa14.38□□□□□ -0.11
H3F3A-201ENST00000366813 MAP2K5Q13163 448 aa14.36□□□□□ -0.11
H3F3A-201ENST00000366813 RNF223E7ERA6 249 aa14.35□□□□□ -0.11
H3F3A-201ENST00000366813 ADH1BP00325 375 aa14.34□□□□□ -0.11
H3F3A-201ENST00000366813 CEP164Q9UPV0 1460 aa14.33□□□□□ -0.12
H3F3A-201ENST00000366813 IRF6O14896 467 aa14.33□□□□□ -0.12
H3F3A-201ENST00000366813 S1PR4O95977 384 aa14.33□□□□□ -0.12
H3F3A-201ENST00000366813 GCGRP47871 477 aa14.32□□□□□ -0.12
H3F3A-201ENST00000366813 MINK1Q8N4C8 1332 aaPredicted RBP14.32□□□□□ -0.12
H3F3A-201ENST00000366813 ARAP1Q96P48 1450 aa14.32□□□□□ -0.12
H3F3A-201ENST00000366813 ATP6V1AP38606 617 aa14.31□□□□□ -0.12
H3F3A-201ENST00000366813 FUT2Q10981 343 aa14.31□□□□□ -0.12
H3F3A-201ENST00000366813 SLC6A16Q9GZN6 736 aa14.31□□□□□ -0.12
H3F3A-201ENST00000366813 PEG3Q9GZU2 1588 aa14.3□□□□□ -0.12
H3F3A-201ENST00000366813 PPEF1O14829 653 aaPredicted RBP14.3□□□□□ -0.12
H3F3A-201ENST00000366813 SLC19A1P41440 591 aa14.3□□□□□ -0.12
H3F3A-201ENST00000366813 SPSB2Q99619 263 aa14.3□□□□□ -0.12
H3F3A-201ENST00000366813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.29□□□□□ -0.12
H3F3A-201ENST00000366813 ANKLE1Q8NAG6 615 aa14.28□□□□□ -0.12
H3F3A-201ENST00000366813 GRIPAP1Q4V328 841 aa14.27□□□□□ -0.12
H3F3A-201ENST00000366813 MORN1Q5T089 497 aa14.27□□□□□ -0.12
H3F3A-201ENST00000366813 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.13
H3F3A-201ENST00000366813 PDZRN3Q9UPQ7 1066 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms