RNA–Protein interactions for RNA: ENST00000366747.7

MRPL55-218, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-218ENST00000366747 CHGAP10645 457 aaKnown RBP21.78■■□□□ 1.08
MRPL55-218ENST00000366747 HRCP23327 699 aa21.78■■□□□ 1.08
MRPL55-218ENST00000366747 PLEKHG1Q9ULL1 1385 aa21.77■■□□□ 1.08
MRPL55-218ENST00000366747 RAB3GAP2Q9H2M9 1393 aa21.75■■□□□ 1.07
MRPL55-218ENST00000366747 PPP1R15AO75807 674 aaPredicted RBP21.75■■□□□ 1.07
MRPL55-218ENST00000366747 MPHOSPH9Q99550 1183 aa21.75■■□□□ 1.07
MRPL55-218ENST00000366747 CLTCL1P53675 1640 aa21.73■■□□□ 1.07
MRPL55-218ENST00000366747 MYO5BQ9ULV0 1848 aa21.7■■□□□ 1.06
MRPL55-218ENST00000366747 CCDC144AA2RUR9 1427 aa21.68■■□□□ 1.06
MRPL55-218ENST00000366747 DIP2AQ14689 1571 aa21.68■■□□□ 1.06
MRPL55-218ENST00000366747 BCANQ96GW7 911 aa21.67■■□□□ 1.06
MRPL55-218ENST00000366747 TBX22Q9Y458 520 aa21.67■■□□□ 1.06
MRPL55-218ENST00000366747 RPGRIP1LQ68CZ1 1315 aa21.66■■□□□ 1.06
MRPL55-218ENST00000366747 KCNA6P17658 529 aa21.66■■□□□ 1.06
MRPL55-218ENST00000366747 ZNF326Q5BKZ1 582 aaKnown RBP21.66■■□□□ 1.06
MRPL55-218ENST00000366747 PIK3R4Q99570 1358 aa21.65■■□□□ 1.06
MRPL55-218ENST00000366747 KIF1BO60333 1816 aa21.65■■□□□ 1.06
MRPL55-218ENST00000366747 SLC26A8Q96RN1 970 aa21.65■■□□□ 1.06
MRPL55-218ENST00000366747 LRRC7Q96NW7 1537 aa21.64■■□□□ 1.05
MRPL55-218ENST00000366747 NKTRP30414 1462 aaKnown RBP21.64■■□□□ 1.05
MRPL55-218ENST00000366747 NWD1Q149M9 1564 aa21.63■■□□□ 1.05
MRPL55-218ENST00000366747 ADAMTS13Q76LX8 1427 aa21.63■■□□□ 1.05
MRPL55-218ENST00000366747 NEXMIFQ5QGS0 1516 aa21.62■■□□□ 1.05
MRPL55-218ENST00000366747 SETBP1Q9Y6X0 1596 aa21.61■■□□□ 1.05
MRPL55-218ENST00000366747 VGFO15240 615 aaPredicted RBP21.61■■□□□ 1.05
MRPL55-218ENST00000366747 FOXD1Q16676 465 aa21.61■■□□□ 1.05
MRPL55-218ENST00000366747 STRCP1A6NGW2 1772 aa21.6■■□□□ 1.05
MRPL55-218ENST00000366747 UBAP1LF5GYI3 381 aa21.59■■□□□ 1.05
MRPL55-218ENST00000366747 TOM1O60784 492 aa21.59■■□□□ 1.05
MRPL55-218ENST00000366747 NUTM2DQ5VT03 806 aaPredicted RBP21.58■■□□□ 1.05
MRPL55-218ENST00000366747 SPATA31E1Q6ZUB1 1445 aa21.57■■□□□ 1.04
MRPL55-218ENST00000366747 ANKRD30BQ9BXX2 1392 aa21.55■■□□□ 1.04
MRPL55-218ENST00000366747 NCOA3Q9Y6Q9 1424 aa21.55■■□□□ 1.04
MRPL55-218ENST00000366747 TMEM94Q12767 1356 aa21.53■■□□□ 1.04
MRPL55-218ENST00000366747 NRXN3Q9Y4C0 1643 aa21.52■■□□□ 1.04
MRPL55-218ENST00000366747 PROSER2Q86WR7 435 aaPredicted RBP21.52■■□□□ 1.04
MRPL55-218ENST00000366747 CHD2O14647 1828 aaKnown RBP21.52■■□□□ 1.04
MRPL55-218ENST00000366747 PPLO60437 1756 aa21.48■■□□□ 1.03
MRPL55-218ENST00000366747 SENP3Q9H4L4 574 aaPredicted RBP21.47■■□□□ 1.03
MRPL55-218ENST00000366747 AMOTL2Q9Y2J4 779 aa21.47■■□□□ 1.03
MRPL55-218ENST00000366747 RGL3Q3MIN7 710 aa21.46■■□□□ 1.03
MRPL55-218ENST00000366747 MSH6P52701 1360 aa21.46■■□□□ 1.03
MRPL55-218ENST00000366747 METP08581 1390 aa21.45■■□□□ 1.02
MRPL55-218ENST00000366747 PRAG1Q86YV5 1406 aa21.45■■□□□ 1.02
MRPL55-218ENST00000366747 PTPRUQ92729 1446 aa21.45■■□□□ 1.02
MRPL55-218ENST00000366747 XRN1Q8IZH2 1706 aaKnown RBP21.44■■□□□ 1.02
MRPL55-218ENST00000366747 STAC3Q96MF2 364 aa21.44■■□□□ 1.02
MRPL55-218ENST00000366747 ALKQ9UM73 1620 aa21.44■■□□□ 1.02
MRPL55-218ENST00000366747 MYOM2P54296 1465 aa21.43■■□□□ 1.02
MRPL55-218ENST00000366747 XIRP1Q702N8 1843 aaKnown RBP21.43■■□□□ 1.02
MRPL55-218ENST00000366747 TRIM26Q12899 539 aaPredicted RBP21.42■■□□□ 1.02
MRPL55-218ENST00000366747 IFT172Q9UG01 1749 aa21.42■■□□□ 1.02
MRPL55-218ENST00000366747 PIK3C2GO75747 1445 aa21.41■■□□□ 1.02
MRPL55-218ENST00000366747 PTCH1Q13635 1447 aa21.4■■□□□ 1.02
MRPL55-218ENST00000366747 ADGRF5Q8IZF2 1346 aa21.4■■□□□ 1.02
MRPL55-218ENST00000366747 PIP4K2BP78356 416 aa21.4■■□□□ 1.02
MRPL55-218ENST00000366747 SCAF1Q9H7N4 1312 aaKnown RBP21.39■■□□□ 1.01
MRPL55-218ENST00000366747 NRXN1Q9ULB1 1477 aa21.39■■□□□ 1.01
MRPL55-218ENST00000366747 DCCP43146 1447 aa21.38■■□□□ 1.01
MRPL55-218ENST00000366747 SETD1AO15047 1707 aaKnown RBP21.38■■□□□ 1.01
MRPL55-218ENST00000366747 C19orf44Q9H6X5 657 aa21.38■■□□□ 1.01
MRPL55-218ENST00000366747 FAM135BQ49AJ0 1406 aa21.38■■□□□ 1.01
MRPL55-218ENST00000366747 C14orf37Q86TY3 774 aa21.36■■□□□ 1.01
MRPL55-218ENST00000366747 CADPS2Q86UW7 1296 aa21.36■■□□□ 1.01
MRPL55-218ENST00000366747 RBM33Q96EV2 1170 aaKnown RBP21.35■■□□□ 1.01
MRPL55-218ENST00000366747 LAMC1P11047 1609 aa21.33■■□□□ 1
MRPL55-218ENST00000366747 TECPR2O15040 1411 aa21.32■■□□□ 1
MRPL55-218ENST00000366747 ATF3P18847 181 aa21.32■■□□□ 1
MRPL55-218ENST00000366747 C14orf93Q9H972 538 aaKnown RBP21.32■■□□□ 1
MRPL55-218ENST00000366747 ADGRL3Q9HAR2 1447 aa21.31■■□□□ 1
MRPL55-218ENST00000366747 LRPPRCP42704 1394 aaKnown RBP21.31■■□□□ 1
MRPL55-218ENST00000366747 HSPA1LP34931 641 aa21.3■■□□□ 1
MRPL55-218ENST00000366747 SLAIN2Q9P270 581 aa21.3■■□□□ 1
MRPL55-218ENST00000366747 ABCC11Q96J66 1382 aa21.3■■□□□ 1
MRPL55-218ENST00000366747 ROBO2Q9HCK4 1378 aa21.28■■□□□ 1
MRPL55-218ENST00000366747 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.27■■□□□ 1
MRPL55-218ENST00000366747 DHX57Q6P158 1386 aaKnown RBP21.26■□□□□ 0.99
MRPL55-218ENST00000366747 ASXL1Q8IXJ9 1541 aa21.26■□□□□ 0.99
MRPL55-218ENST00000366747 DCAF11Q8TEB1 546 aa21.26■□□□□ 0.99
MRPL55-218ENST00000366747 SIRT1Q96EB6 747 aa21.26■□□□□ 0.99
MRPL55-218ENST00000366747 YTHDC2Q9H6S0 1430 aaKnown RBP21.25■□□□□ 0.99
MRPL55-218ENST00000366747 KNDC1Q76NI1 1749 aa21.24■□□□□ 0.99
MRPL55-218ENST00000366747 CFAP70Q5T0N1 1121 aa21.23■□□□□ 0.99
MRPL55-218ENST00000366747 ROBO1Q9Y6N7 1651 aa21.23■□□□□ 0.99
MRPL55-218ENST00000366747 TMEM132EQ6IEE7 984 aa21.21■□□□□ 0.99
MRPL55-218ENST00000366747 MST1RQ04912 1400 aa21.21■□□□□ 0.99
MRPL55-218ENST00000366747 KDM2AQ9Y2K7 1162 aa21.2■□□□□ 0.98
MRPL55-218ENST00000366747 NALCNQ8IZF0 1738 aa21.2■□□□□ 0.98
MRPL55-218ENST00000366747 DLC1Q96QB1 1528 aa21.19■□□□□ 0.98
MRPL55-218ENST00000366747 STK26Q9P289 416 aa21.19■□□□□ 0.98
MRPL55-218ENST00000366747 ADGRB1O14514 1584 aa21.19■□□□□ 0.98
MRPL55-218ENST00000366747 CDC42BPGQ6DT37 1551 aa21.17■□□□□ 0.98
MRPL55-218ENST00000366747 AHDC1Q5TGY3 1603 aaPredicted RBP21.15■□□□□ 0.98
MRPL55-218ENST00000366747 BRINP3Q76B58 766 aa21.15■□□□□ 0.98
MRPL55-218ENST00000366747 C1orf167Q5SNV9 1468 aa21.13■□□□□ 0.97
MRPL55-218ENST00000366747 WAPLQ7Z5K2 1190 aa21.12■□□□□ 0.97
MRPL55-218ENST00000366747 KIAA1210Q9ULL0 1709 aa21.12■□□□□ 0.97
MRPL55-218ENST00000366747 PLEKHH1Q9ULM0 1364 aa21.1■□□□□ 0.97
MRPL55-218ENST00000366747 JCADQ9P266 1359 aa21.1■□□□□ 0.97
MRPL55-218ENST00000366747 L3MBTL2Q969R5 705 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms