RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 SETD1AO15047 1707 aaKnown RBP18.29■□□□□ 0.52
MRPL55-213ENST00000366740 KCNA6P17658 529 aa18.28■□□□□ 0.52
MRPL55-213ENST00000366740 ZFYVE9O95405 1425 aa18.27■□□□□ 0.52
MRPL55-213ENST00000366740 STAG3Q9UJ98 1225 aa18.27■□□□□ 0.52
MRPL55-213ENST00000366740 COL16A1Q07092 1604 aaPredicted RBP18.27■□□□□ 0.51
MRPL55-213ENST00000366740 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.25■□□□□ 0.51
MRPL55-213ENST00000366740 IQGAP3Q86VI3 1631 aa18.23■□□□□ 0.51
MRPL55-213ENST00000366740 SHPRHQ149N8 1683 aa18.23■□□□□ 0.51
MRPL55-213ENST00000366740 DIP2AQ14689 1571 aa18.23■□□□□ 0.51
MRPL55-213ENST00000366740 SLC26A8Q96RN1 970 aa18.23■□□□□ 0.51
MRPL55-213ENST00000366740 CHIC2Q9UKJ5 165 aa18.23■□□□□ 0.51
MRPL55-213ENST00000366740 APLP2Q06481 763 aa18.22■□□□□ 0.51
MRPL55-213ENST00000366740 SLC52A1Q9NWF4 448 aa18.22■□□□□ 0.51
MRPL55-213ENST00000366740 PLEKHG1Q9ULL1 1385 aa18.21■□□□□ 0.51
MRPL55-213ENST00000366740 PROSER2Q86WR7 435 aaPredicted RBP18.21■□□□□ 0.51
MRPL55-213ENST00000366740 ANKRD50Q9ULJ7 1429 aa18.21■□□□□ 0.51
MRPL55-213ENST00000366740 MSH6P52701 1360 aa18.2■□□□□ 0.5
MRPL55-213ENST00000366740 RIMS2Q9UQ26 1411 aa18.18■□□□□ 0.5
MRPL55-213ENST00000366740 AHDC1Q5TGY3 1603 aaPredicted RBP18.17■□□□□ 0.5
MRPL55-213ENST00000366740 RBM33Q96EV2 1170 aaKnown RBP18.17■□□□□ 0.5
MRPL55-213ENST00000366740 SPHKAPQ2M3C7 1700 aa18.17■□□□□ 0.5
MRPL55-213ENST00000366740 NCOA3Q9Y6Q9 1424 aa18.16■□□□□ 0.5
MRPL55-213ENST00000366740 POTEAQ6S8J7 498 aa18.16■□□□□ 0.5
MRPL55-213ENST00000366740 NRXN3Q9Y4C0 1643 aa18.15■□□□□ 0.5
MRPL55-213ENST00000366740 XRN1Q8IZH2 1706 aaKnown RBP18.15■□□□□ 0.5
MRPL55-213ENST00000366740 JCADQ9P266 1359 aa18.14■□□□□ 0.49
MRPL55-213ENST00000366740 ADAMTS13Q76LX8 1427 aa18.14■□□□□ 0.49
MRPL55-213ENST00000366740 TRPM2O94759 1503 aa18.13■□□□□ 0.49
MRPL55-213ENST00000366740 NHSL1Q5SYE7 1610 aa18.12■□□□□ 0.49
MRPL55-213ENST00000366740 SLAIN2Q9P270 581 aa18.12■□□□□ 0.49
MRPL55-213ENST00000366740 LRP6O75581 1613 aa18.11■□□□□ 0.49
MRPL55-213ENST00000366740 PIK3R4Q99570 1358 aa18.1■□□□□ 0.49
MRPL55-213ENST00000366740 BCANQ96GW7 911 aa18.09■□□□□ 0.49
MRPL55-213ENST00000366740 TBX22Q9Y458 520 aa18.09■□□□□ 0.49
MRPL55-213ENST00000366740 KIF1BO60333 1816 aa18.08■□□□□ 0.48
MRPL55-213ENST00000366740 PPP1R15AO75807 674 aaPredicted RBP18.08■□□□□ 0.48
MRPL55-213ENST00000366740 HDGFP51858 240 aaKnown RBP18.08■□□□□ 0.48
MRPL55-213ENST00000366740 SETBP1Q9Y6X0 1596 aa18.08■□□□□ 0.48
MRPL55-213ENST00000366740 FAM50AQ14320 339 aaKnown RBP18.07■□□□□ 0.48
MRPL55-213ENST00000366740 ROCK1Q13464 1354 aa18.06■□□□□ 0.48
MRPL55-213ENST00000366740 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.06■□□□□ 0.48
MRPL55-213ENST00000366740 NALCNQ8IZF0 1738 aa18.06■□□□□ 0.48
MRPL55-213ENST00000366740 SPATA31A6Q5VVP1 1343 aa18.04■□□□□ 0.48
MRPL55-213ENST00000366740 DCCP43146 1447 aa18.03■□□□□ 0.48
MRPL55-213ENST00000366740 PTPRUQ92729 1446 aa18.03■□□□□ 0.48
MRPL55-213ENST00000366740 CADPS2Q86UW7 1296 aa18.01■□□□□ 0.47
MRPL55-213ENST00000366740 ASXL1Q8IXJ9 1541 aa18.01■□□□□ 0.47
MRPL55-213ENST00000366740 C19orf44Q9H6X5 657 aa18■□□□□ 0.47
MRPL55-213ENST00000366740 LAMC1P11047 1609 aa18■□□□□ 0.47
MRPL55-213ENST00000366740 CLTCL1P53675 1640 aa18■□□□□ 0.47
MRPL55-213ENST00000366740 CHGAP10645 457 aaKnown RBP17.99■□□□□ 0.47
MRPL55-213ENST00000366740 NUTM2DQ5VT03 806 aaPredicted RBP17.98■□□□□ 0.47
MRPL55-213ENST00000366740 NEXMIFQ5QGS0 1516 aa17.98■□□□□ 0.47
MRPL55-213ENST00000366740 C14orf37Q86TY3 774 aa17.97■□□□□ 0.47
MRPL55-213ENST00000366740 ATF3P18847 181 aa17.96■□□□□ 0.47
MRPL55-213ENST00000366740 MST1RQ04912 1400 aa17.96■□□□□ 0.47
MRPL55-213ENST00000366740 CDK12Q9NYV4 1490 aaPredicted RBP17.95■□□□□ 0.46
MRPL55-213ENST00000366740 NUP155O75694 1391 aa17.95■□□□□ 0.46
MRPL55-213ENST00000366740 ZNF772Q68DY9 489 aaPredicted RBP17.95■□□□□ 0.46
MRPL55-213ENST00000366740 AMOTL2Q9Y2J4 779 aa17.95■□□□□ 0.46
MRPL55-213ENST00000366740 SETD5Q9C0A6 1442 aa17.95■□□□□ 0.46
MRPL55-213ENST00000366740 BRINP3Q76B58 766 aa17.94■□□□□ 0.46
MRPL55-213ENST00000366740 PPLO60437 1756 aa17.94■□□□□ 0.46
MRPL55-213ENST00000366740 MARF1Q9Y4F3 1742 aaKnown RBP17.92■□□□□ 0.46
MRPL55-213ENST00000366740 MEX3CQ5U5Q3 659 aaKnown RBP17.92■□□□□ 0.46
MRPL55-213ENST00000366740 ADGRL3Q9HAR2 1447 aa17.91■□□□□ 0.46
MRPL55-213ENST00000366740 UPF1Q92900 1129 aaKnown RBP eCLIP17.89■□□□□ 0.45
MRPL55-213ENST00000366740 METP08581 1390 aa17.89■□□□□ 0.45
MRPL55-213ENST00000366740 COL22A1Q8NFW1 1626 aaPredicted RBP17.87■□□□□ 0.45
MRPL55-213ENST00000366740 PPARGC1BQ86YN6 1023 aaKnown RBP17.86■□□□□ 0.45
MRPL55-213ENST00000366740 TRIM52Q96A61 297 aa17.86■□□□□ 0.45
MRPL55-213ENST00000366740 PRAG1Q86YV5 1406 aa17.84■□□□□ 0.45
MRPL55-213ENST00000366740 PNPLA6Q8IY17 1366 aa17.84■□□□□ 0.45
MRPL55-213ENST00000366740 RXRBP28702 533 aa17.84■□□□□ 0.45
MRPL55-213ENST00000366740 IFT172Q9UG01 1749 aa17.84■□□□□ 0.45
MRPL55-213ENST00000366740 PTCH1Q13635 1447 aa17.83■□□□□ 0.45
MRPL55-213ENST00000366740 AFF2P51816 1311 aa17.83■□□□□ 0.44
MRPL55-213ENST00000366740 RGS12O14924 1447 aa17.82■□□□□ 0.44
MRPL55-213ENST00000366740 NUTM2BA6NNL0 878 aaPredicted RBP17.82■□□□□ 0.44
MRPL55-213ENST00000366740 NUTM2EB1AL46 878 aaPredicted RBP17.82■□□□□ 0.44
MRPL55-213ENST00000366740 NUTM2AQ8IVF1 878 aaPredicted RBP17.82■□□□□ 0.44
MRPL55-213ENST00000366740 ZNF326Q5BKZ1 582 aaKnown RBP17.81■□□□□ 0.44
MRPL55-213ENST00000366740 LRRC59Q96AG4 307 aaKnown RBP17.81■□□□□ 0.44
MRPL55-213ENST00000366740 C1orf167Q5SNV9 1468 aa17.81■□□□□ 0.44
MRPL55-213ENST00000366740 ITGAEP38570 1179 aa17.8■□□□□ 0.44
MRPL55-213ENST00000366740 KNDC1Q76NI1 1749 aa17.79■□□□□ 0.44
MRPL55-213ENST00000366740 CDC42BPGQ6DT37 1551 aa17.79■□□□□ 0.44
MRPL55-213ENST00000366740 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.78■□□□□ 0.44
MRPL55-213ENST00000366740 NAIPQ13075 1403 aa17.77■□□□□ 0.44
MRPL55-213ENST00000366740 RRBP1Q9P2E9 1410 aaKnown RBP17.76■□□□□ 0.43
MRPL55-213ENST00000366740 DDX17Q92841 729 aaKnown RBP17.76■□□□□ 0.43
MRPL55-213ENST00000366740 RGPD8O14715 1765 aaPredicted RBP17.74■□□□□ 0.43
MRPL55-213ENST00000366740 RBM6P78332 1123 aaKnown RBP17.74■□□□□ 0.43
MRPL55-213ENST00000366740 C8orf37Q96NL8 207 aa17.74■□□□□ 0.43
MRPL55-213ENST00000366740 ROBO2Q9HCK4 1378 aa17.74■□□□□ 0.43
MRPL55-213ENST00000366740 SOS2Q07890 1332 aaPredicted RBP17.73■□□□□ 0.43
MRPL55-213ENST00000366740 FMN2Q9NZ56 1722 aa17.72■□□□□ 0.43
MRPL55-213ENST00000366740 QTRT2Q9H974 415 aaKnown RBP17.72■□□□□ 0.43
MRPL55-213ENST00000366740 HFM1A2PYH4 1435 aa17.72■□□□□ 0.43
MRPL55-213ENST00000366740 BRWD3Q6RI45 1802 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms