RNA–Protein interactions for RNA: ENST00000365490.1

RN7SKP249-201, Transcript of RNA, 7SK small nuclear pseudogene 249, humanhuman

BASIC

Gene RN7SKP249, Length 355 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP249-201ENST00000365490 PPLO60437 1756 aa14.04□□□□□ -0.16
RN7SKP249-201ENST00000365490 MYOM2P54296 1465 aa14.04□□□□□ -0.16
RN7SKP249-201ENST00000365490 THEMISQ8N1K5 641 aaPredicted RBP14.03□□□□□ -0.16
RN7SKP249-201ENST00000365490 STAG3Q9UJ98 1225 aa14.03□□□□□ -0.16
RN7SKP249-201ENST00000365490 SLIT1O75093 1534 aa14.02□□□□□ -0.16
RN7SKP249-201ENST00000365490 ARHGAP23Q9P227 1491 aa14.02□□□□□ -0.16
RN7SKP249-201ENST00000365490 NRXN1Q9ULB1 1477 aa14.02□□□□□ -0.16
RN7SKP249-201ENST00000365490 TMEM2Q9UHN6 1383 aa14.02□□□□□ -0.17
RN7SKP249-201ENST00000365490 ZNF326Q5BKZ1 582 aaKnown RBP14.02□□□□□ -0.17
RN7SKP249-201ENST00000365490 VGFO15240 615 aaPredicted RBP14.01□□□□□ -0.17
RN7SKP249-201ENST00000365490 NBPF8Q3BBV2 869 aa14.01□□□□□ -0.17
RN7SKP249-201ENST00000365490 PRAG1Q86YV5 1406 aa14□□□□□ -0.17
RN7SKP249-201ENST00000365490 KDM2AQ9Y2K7 1162 aa14□□□□□ -0.17
RN7SKP249-201ENST00000365490 RIMS2Q9UQ26 1411 aa13.99□□□□□ -0.17
RN7SKP249-201ENST00000365490 HDGFP51858 240 aaKnown RBP13.99□□□□□ -0.17
RN7SKP249-201ENST00000365490 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.99□□□□□ -0.17
RN7SKP249-201ENST00000365490 ADGRF5Q8IZF2 1346 aa13.98□□□□□ -0.17
RN7SKP249-201ENST00000365490 PIK3C2GO75747 1445 aa13.97□□□□□ -0.17
RN7SKP249-201ENST00000365490 LTKP29376 864 aa13.96□□□□□ -0.17
RN7SKP249-201ENST00000365490 KIAA1210Q9ULL0 1709 aa13.95□□□□□ -0.18
RN7SKP249-201ENST00000365490 TRPM1Q7Z4N2 1603 aa13.95□□□□□ -0.18
RN7SKP249-201ENST00000365490 RALGAPBQ86X10 1494 aa13.94□□□□□ -0.18
RN7SKP249-201ENST00000365490 LMTK3Q96Q04 1460 aa13.94□□□□□ -0.18
RN7SKP249-201ENST00000365490 TXNDC2Q86VQ3 553 aa13.94□□□□□ -0.18
RN7SKP249-201ENST00000365490 C14orf93Q9H972 538 aaKnown RBP13.94□□□□□ -0.18
RN7SKP249-201ENST00000365490 EID1Q9Y6B2 187 aa13.94□□□□□ -0.18
RN7SKP249-201ENST00000365490 SCAF11Q99590 1463 aaKnown RBP13.93□□□□□ -0.18
RN7SKP249-201ENST00000365490 NUTM2DQ5VT03 806 aaPredicted RBP13.93□□□□□ -0.18
RN7SKP249-201ENST00000365490 PLEKHG1Q9ULL1 1385 aa13.93□□□□□ -0.18
RN7SKP249-201ENST00000365490 SETBP1Q9Y6X0 1596 aa13.92□□□□□ -0.18
RN7SKP249-201ENST00000365490 ANKLE2Q86XL3 938 aa13.92□□□□□ -0.18
RN7SKP249-201ENST00000365490 GPRASP1Q5JY77 1395 aa13.92□□□□□ -0.18
RN7SKP249-201ENST00000365490 NRXN3Q9Y4C0 1643 aa13.91□□□□□ -0.18
RN7SKP249-201ENST00000365490 LAMC1P11047 1609 aa13.9□□□□□ -0.18
RN7SKP249-201ENST00000365490 NBPF1Q3BBV0 1214 aa13.9□□□□□ -0.18
RN7SKP249-201ENST00000365490 CFAP70Q5T0N1 1121 aa13.9□□□□□ -0.18
RN7SKP249-201ENST00000365490 MED14O60244 1454 aa13.9□□□□□ -0.18
RN7SKP249-201ENST00000365490 ALKQ9UM73 1620 aa13.9□□□□□ -0.19
RN7SKP249-201ENST00000365490 SETD1AO15047 1707 aaKnown RBP13.89□□□□□ -0.19
RN7SKP249-201ENST00000365490 ADAMTS13Q76LX8 1427 aa13.89□□□□□ -0.19
RN7SKP249-201ENST00000365490 ADGRB1O14514 1584 aa13.88□□□□□ -0.19
RN7SKP249-201ENST00000365490 POLR1AO95602 1720 aaPredicted RBP13.87□□□□□ -0.19
RN7SKP249-201ENST00000365490 ROCK2O75116 1388 aaKnown RBP13.87□□□□□ -0.19
RN7SKP249-201ENST00000365490 TBX22Q9Y458 520 aa13.87□□□□□ -0.19
RN7SKP249-201ENST00000365490 IQGAP1P46940 1657 aa13.87□□□□□ -0.19
RN7SKP249-201ENST00000365490 ASXL1Q8IXJ9 1541 aa13.85□□□□□ -0.19
RN7SKP249-201ENST00000365490 DIP2AQ14689 1571 aa13.85□□□□□ -0.19
RN7SKP249-201ENST00000365490 HSPA2P54652 639 aa13.85□□□□□ -0.19
RN7SKP249-201ENST00000365490 NCKAP5LQ9HCH0 1330 aa13.85□□□□□ -0.19
RN7SKP249-201ENST00000365490 STRCQ7RTU9 1775 aa13.84□□□□□ -0.19
RN7SKP249-201ENST00000365490 CARD11Q9BXL7 1154 aa13.84□□□□□ -0.19
RN7SKP249-201ENST00000365490 NPHP4O75161 1426 aaPredicted RBP13.83□□□□□ -0.2
RN7SKP249-201ENST00000365490 TMEM132EQ6IEE7 984 aa13.83□□□□□ -0.2
RN7SKP249-201ENST00000365490 METP08581 1390 aa13.83□□□□□ -0.2
RN7SKP249-201ENST00000365490 SLC26A8Q96RN1 970 aa13.82□□□□□ -0.2
RN7SKP249-201ENST00000365490 PIK3R4Q99570 1358 aa13.82□□□□□ -0.2
RN7SKP249-201ENST00000365490 EIF4G2P78344 907 aaKnown RBP eCLIP13.81□□□□□ -0.2
RN7SKP249-201ENST00000365490 BCANQ96GW7 911 aa13.81□□□□□ -0.2
RN7SKP249-201ENST00000365490 LRPPRCP42704 1394 aaKnown RBP13.81□□□□□ -0.2
RN7SKP249-201ENST00000365490 ABCC11Q96J66 1382 aa13.81□□□□□ -0.2
RN7SKP249-201ENST00000365490 USP47Q96K76 1375 aa13.81□□□□□ -0.2
RN7SKP249-201ENST00000365490 YTHDC2Q9H6S0 1430 aaKnown RBP13.81□□□□□ -0.2
RN7SKP249-201ENST00000365490 SIRT1Q96EB6 747 aa13.8□□□□□ -0.2
RN7SKP249-201ENST00000365490 SENP3Q9H4L4 574 aaPredicted RBP13.79□□□□□ -0.2
RN7SKP249-201ENST00000365490 TECPR2O15040 1411 aa13.79□□□□□ -0.2
RN7SKP249-201ENST00000365490 HSPA5P11021 654 aaKnown RBP13.78□□□□□ -0.2
RN7SKP249-201ENST00000365490 PTPRUQ92729 1446 aa13.78□□□□□ -0.2
RN7SKP249-201ENST00000365490 DLC1Q96QB1 1528 aa13.78□□□□□ -0.2
RN7SKP249-201ENST00000365490 KNDC1Q76NI1 1749 aa13.77□□□□□ -0.21
RN7SKP249-201ENST00000365490 CHD2O14647 1828 aaKnown RBP13.76□□□□□ -0.21
RN7SKP249-201ENST00000365490 ST20-MTHFSA0A0A6YYL1 179 aa13.76□□□□□ -0.21
RN7SKP249-201ENST00000365490 TRAK1Q9UPV9 953 aa13.76□□□□□ -0.21
RN7SKP249-201ENST00000365490 XRN1Q8IZH2 1706 aaKnown RBP13.76□□□□□ -0.21
RN7SKP249-201ENST00000365490 ARHGEF28Q8N1W1 1705 aaKnown RBP13.76□□□□□ -0.21
RN7SKP249-201ENST00000365490 FAM135BQ49AJ0 1406 aa13.75□□□□□ -0.21
RN7SKP249-201ENST00000365490 EIF3AQ14152 1382 aaKnown RBP13.75□□□□□ -0.21
RN7SKP249-201ENST00000365490 TESK2Q96S53 571 aa13.75□□□□□ -0.21
RN7SKP249-201ENST00000365490 DMRT2Q9Y5R5 561 aa13.75□□□□□ -0.21
RN7SKP249-201ENST00000365490 CPS1P31327 1500 aa13.74□□□□□ -0.21
RN7SKP249-201ENST00000365490 SBNO2Q9Y2G9 1366 aa13.74□□□□□ -0.21
RN7SKP249-201ENST00000365490 STK26Q9P289 416 aa13.74□□□□□ -0.21
RN7SKP249-201ENST00000365490 AMOTL2Q9Y2J4 779 aa13.74□□□□□ -0.21
RN7SKP249-201ENST00000365490 KCNA6P17658 529 aa13.73□□□□□ -0.21
RN7SKP249-201ENST00000365490 NWD1Q149M9 1564 aa13.73□□□□□ -0.21
RN7SKP249-201ENST00000365490 CENPJQ9HC77 1338 aaPredicted RBP13.72□□□□□ -0.21
RN7SKP249-201ENST00000365490 ZNF316A6NFI3 1004 aaPredicted RBP13.72□□□□□ -0.21
RN7SKP249-201ENST00000365490 SLC24A1O60721 1099 aa13.72□□□□□ -0.21
RN7SKP249-201ENST00000365490 HIRIP3Q9BW71 556 aaPredicted RBP13.72□□□□□ -0.21
RN7SKP249-201ENST00000365490 PTCH1Q13635 1447 aa13.72□□□□□ -0.21
RN7SKP249-201ENST00000365490 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.21
RN7SKP249-201ENST00000365490 PRAM1Q96QH2 718 aa13.7□□□□□ -0.22
RN7SKP249-201ENST00000365490 QRICH2Q9H0J4 1663 aa13.69□□□□□ -0.22
RN7SKP249-201ENST00000365490 C11orf95C9JLR9 678 aaPredicted RBP13.69□□□□□ -0.22
RN7SKP249-201ENST00000365490 WAPLQ7Z5K2 1190 aa13.69□□□□□ -0.22
RN7SKP249-201ENST00000365490 PLEKHH1Q9ULM0 1364 aa13.69□□□□□ -0.22
RN7SKP249-201ENST00000365490 POGKQ9P215 609 aa13.68□□□□□ -0.22
RN7SKP249-201ENST00000365490 STRCP1A6NGW2 1772 aa13.68□□□□□ -0.22
RN7SKP249-201ENST00000365490 NKTRP30414 1462 aaKnown RBP13.67□□□□□ -0.22
RN7SKP249-201ENST00000365490 TMF1P82094 1093 aa13.66□□□□□ -0.22
RN7SKP249-201ENST00000365490 PUS7Q96PZ0 661 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms