RNA–Protein interactions for RNA: ENST00000363468.1

RNU1-49P-201, Transcript of RNA, U1 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU1-49P, Length 159 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-49P-201ENST00000363468 ARHGAP23Q9P227 1491 aa8.99□□□□□ -0.97
RNU1-49P-201ENST00000363468 SLIT1O75093 1534 aa8.99□□□□□ -0.97
RNU1-49P-201ENST00000363468 TMEM2Q9UHN6 1383 aa8.99□□□□□ -0.97
RNU1-49P-201ENST00000363468 ZFYVE9O95405 1425 aa8.98□□□□□ -0.97
RNU1-49P-201ENST00000363468 RIMS2Q9UQ26 1411 aa8.98□□□□□ -0.97
RNU1-49P-201ENST00000363468 LMTK3Q96Q04 1460 aa8.98□□□□□ -0.97
RNU1-49P-201ENST00000363468 PPP1R15AO75807 674 aaPredicted RBP8.98□□□□□ -0.97
RNU1-49P-201ENST00000363468 ZEB1P37275 1124 aaPredicted RBP8.98□□□□□ -0.97
RNU1-49P-201ENST00000363468 HDGFP51858 240 aaKnown RBP8.98□□□□□ -0.97
RNU1-49P-201ENST00000363468 KDM2AQ9Y2K7 1162 aa8.98□□□□□ -0.97
RNU1-49P-201ENST00000363468 MYOM2P54296 1465 aa8.97□□□□□ -0.97
RNU1-49P-201ENST00000363468 VGFO15240 615 aaPredicted RBP8.97□□□□□ -0.97
RNU1-49P-201ENST00000363468 NUTM2DQ5VT03 806 aaPredicted RBP8.97□□□□□ -0.97
RNU1-49P-201ENST00000363468 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.97□□□□□ -0.97
RNU1-49P-201ENST00000363468 NRXN1Q9ULB1 1477 aa8.96□□□□□ -0.97
RNU1-49P-201ENST00000363468 TXNDC2Q86VQ3 553 aa8.96□□□□□ -0.98
RNU1-49P-201ENST00000363468 ADGRF5Q8IZF2 1346 aa8.96□□□□□ -0.98
RNU1-49P-201ENST00000363468 POLR1AO95602 1720 aaPredicted RBP8.95□□□□□ -0.98
RNU1-49P-201ENST00000363468 LTKP29376 864 aa8.95□□□□□ -0.98
RNU1-49P-201ENST00000363468 HSPA2P54652 639 aa8.95□□□□□ -0.98
RNU1-49P-201ENST00000363468 ANKLE2Q86XL3 938 aa8.95□□□□□ -0.98
RNU1-49P-201ENST00000363468 EID1Q9Y6B2 187 aa8.95□□□□□ -0.98
RNU1-49P-201ENST00000363468 PRAG1Q86YV5 1406 aa8.95□□□□□ -0.98
RNU1-49P-201ENST00000363468 SCAF11Q99590 1463 aaKnown RBP8.95□□□□□ -0.98
RNU1-49P-201ENST00000363468 NBPF8Q3BBV2 869 aa8.94□□□□□ -0.98
RNU1-49P-201ENST00000363468 PIK3C2GO75747 1445 aa8.94□□□□□ -0.98
RNU1-49P-201ENST00000363468 KIAA1210Q9ULL0 1709 aa8.94□□□□□ -0.98
RNU1-49P-201ENST00000363468 AEBP2Q6ZN18 517 aaPredicted RBP8.93□□□□□ -0.98
RNU1-49P-201ENST00000363468 PLEKHG1Q9ULL1 1385 aa8.93□□□□□ -0.98
RNU1-49P-201ENST00000363468 TRPM1Q7Z4N2 1603 aa8.93□□□□□ -0.98
RNU1-49P-201ENST00000363468 NRXN3Q9Y4C0 1643 aa8.93□□□□□ -0.98
RNU1-49P-201ENST00000363468 IQGAP1P46940 1657 aa8.93□□□□□ -0.98
RNU1-49P-201ENST00000363468 STRCQ7RTU9 1775 aa8.93□□□□□ -0.98
RNU1-49P-201ENST00000363468 LAMC1P11047 1609 aa8.92□□□□□ -0.98
RNU1-49P-201ENST00000363468 SETBP1Q9Y6X0 1596 aa8.92□□□□□ -0.98
RNU1-49P-201ENST00000363468 MED14O60244 1454 aa8.92□□□□□ -0.98
RNU1-49P-201ENST00000363468 NCKAP5LQ9HCH0 1330 aa8.92□□□□□ -0.98
RNU1-49P-201ENST00000363468 C14orf93Q9H972 538 aaKnown RBP8.92□□□□□ -0.98
RNU1-49P-201ENST00000363468 SETD1AO15047 1707 aaKnown RBP8.91□□□□□ -0.98
RNU1-49P-201ENST00000363468 NPHP4O75161 1426 aaPredicted RBP8.91□□□□□ -0.98
RNU1-49P-201ENST00000363468 SENP3Q9H4L4 574 aaPredicted RBP8.91□□□□□ -0.98
RNU1-49P-201ENST00000363468 ALKQ9UM73 1620 aa8.91□□□□□ -0.98
RNU1-49P-201ENST00000363468 RALGAPBQ86X10 1494 aa8.9□□□□□ -0.98
RNU1-49P-201ENST00000363468 ADAMTS13Q76LX8 1427 aa8.9□□□□□ -0.98
RNU1-49P-201ENST00000363468 CFAP70Q5T0N1 1121 aa8.9□□□□□ -0.98
RNU1-49P-201ENST00000363468 BCANQ96GW7 911 aa8.9□□□□□ -0.98
RNU1-49P-201ENST00000363468 NBPF1Q3BBV0 1214 aa8.89□□□□□ -0.99
RNU1-49P-201ENST00000363468 TBX22Q9Y458 520 aa8.89□□□□□ -0.99
RNU1-49P-201ENST00000363468 DIP2AQ14689 1571 aa8.89□□□□□ -0.99
RNU1-49P-201ENST00000363468 GPRASP1Q5JY77 1395 aa8.88□□□□□ -0.99
RNU1-49P-201ENST00000363468 ADGRB1O14514 1584 aa8.88□□□□□ -0.99
RNU1-49P-201ENST00000363468 SLC26A8Q96RN1 970 aa8.88□□□□□ -0.99
RNU1-49P-201ENST00000363468 ROCK2O75116 1388 aaKnown RBP8.87□□□□□ -0.99
RNU1-49P-201ENST00000363468 ASXL1Q8IXJ9 1541 aa8.87□□□□□ -0.99
RNU1-49P-201ENST00000363468 TMEM132EQ6IEE7 984 aa8.87□□□□□ -0.99
RNU1-49P-201ENST00000363468 CHD2O14647 1828 aaKnown RBP8.87□□□□□ -0.99
RNU1-49P-201ENST00000363468 METP08581 1390 aa8.86□□□□□ -0.99
RNU1-49P-201ENST00000363468 CARD11Q9BXL7 1154 aa8.86□□□□□ -0.99
RNU1-49P-201ENST00000363468 DMRT2Q9Y5R5 561 aa8.86□□□□□ -0.99
RNU1-49P-201ENST00000363468 YTHDC2Q9H6S0 1430 aaKnown RBP8.85□□□□□ -0.99
RNU1-49P-201ENST00000363468 LRPPRCP42704 1394 aaKnown RBP8.85□□□□□ -0.99
RNU1-49P-201ENST00000363468 PIK3R4Q99570 1358 aa8.85□□□□□ -0.99
RNU1-49P-201ENST00000363468 KNDC1Q76NI1 1749 aa8.84□□□□□ -0.99
RNU1-49P-201ENST00000363468 PTPRUQ92729 1446 aa8.84□□□□□ -0.99
RNU1-49P-201ENST00000363468 XRN1Q8IZH2 1706 aaKnown RBP8.83□□□□□ -1
RNU1-49P-201ENST00000363468 ARHGEF28Q8N1W1 1705 aaKnown RBP8.83□□□□□ -1
RNU1-49P-201ENST00000363468 STK26Q9P289 416 aa8.83□□□□□ -1
RNU1-49P-201ENST00000363468 AMOTL2Q9Y2J4 779 aa8.83□□□□□ -1
RNU1-49P-201ENST00000363468 ABCC11Q96J66 1382 aa8.83□□□□□ -1
RNU1-49P-201ENST00000363468 TECPR2O15040 1411 aa8.82□□□□□ -1
RNU1-49P-201ENST00000363468 STRCP1A6NGW2 1772 aa8.82□□□□□ -1
RNU1-49P-201ENST00000363468 DLC1Q96QB1 1528 aa8.82□□□□□ -1
RNU1-49P-201ENST00000363468 KCNA6P17658 529 aa8.82□□□□□ -1
RNU1-49P-201ENST00000363468 EIF4G2P78344 907 aaKnown RBP eCLIP8.82□□□□□ -1
RNU1-49P-201ENST00000363468 TRAK1Q9UPV9 953 aa8.82□□□□□ -1
RNU1-49P-201ENST00000363468 USP47Q96K76 1375 aa8.82□□□□□ -1
RNU1-49P-201ENST00000363468 NWD1Q149M9 1564 aa8.82□□□□□ -1
RNU1-49P-201ENST00000363468 CPS1P31327 1500 aa8.81□□□□□ -1
RNU1-49P-201ENST00000363468 SIRT1Q96EB6 747 aa8.81□□□□□ -1
RNU1-49P-201ENST00000363468 FAM135BQ49AJ0 1406 aa8.8□□□□□ -1
RNU1-49P-201ENST00000363468 HSPA5P11021 654 aaKnown RBP8.8□□□□□ -1
RNU1-49P-201ENST00000363468 EIF3AQ14152 1382 aaKnown RBP8.8□□□□□ -1
RNU1-49P-201ENST00000363468 ROBO2Q9HCK4 1378 aa8.8□□□□□ -1
RNU1-49P-201ENST00000363468 PTCH1Q13635 1447 aa8.8□□□□□ -1
RNU1-49P-201ENST00000363468 ST20-MTHFSA0A0A6YYL1 179 aa8.79□□□□□ -1
RNU1-49P-201ENST00000363468 PRAM1Q96QH2 718 aa8.79□□□□□ -1
RNU1-49P-201ENST00000363468 CENPJQ9HC77 1338 aaPredicted RBP8.79□□□□□ -1
RNU1-49P-201ENST00000363468 QRICH2Q9H0J4 1663 aa8.78□□□□□ -1
RNU1-49P-201ENST00000363468 NKTRP30414 1462 aaKnown RBP8.78□□□□□ -1
RNU1-49P-201ENST00000363468 PLEKHH1Q9ULM0 1364 aa8.78□□□□□ -1
RNU1-49P-201ENST00000363468 WAPLQ7Z5K2 1190 aa8.78□□□□□ -1
RNU1-49P-201ENST00000363468 POGKQ9P215 609 aa8.78□□□□□ -1
RNU1-49P-201ENST00000363468 ZNF335Q9H4Z2 1342 aaPredicted RBP8.78□□□□□ -1
RNU1-49P-201ENST00000363468 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.77□□□□□ -1
RNU1-49P-201ENST00000363468 TESK2Q96S53 571 aa8.77□□□□□ -1.01
RNU1-49P-201ENST00000363468 HIRIP3Q9BW71 556 aaPredicted RBP8.77□□□□□ -1.01
RNU1-49P-201ENST00000363468 SBNO2Q9Y2G9 1366 aa8.76□□□□□ -1.01
RNU1-49P-201ENST00000363468 XIRP1Q702N8 1843 aaKnown RBP8.76□□□□□ -1.01
RNU1-49P-201ENST00000363468 SAFB2Q14151 953 aaKnown RBP eCLIP8.76□□□□□ -1.01
RNU1-49P-201ENST00000363468 PROSER2Q86WR7 435 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms