RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 ARHGAP23Q9P227 1491 aa26.02■■□□□ 1.76
CLK2-202ENST00000361168 SLIT1O75093 1534 aa26.01■■□□□ 1.75
CLK2-202ENST00000361168 NEXMIFQ5QGS0 1516 aa25.99■■□□□ 1.75
CLK2-202ENST00000361168 ANKLE2Q86XL3 938 aa25.98■■□□□ 1.75
CLK2-202ENST00000361168 L3MBTL2Q969R5 705 aa25.97■■□□□ 1.75
CLK2-202ENST00000361168 KDM2AQ9Y2K7 1162 aa25.97■■□□□ 1.75
CLK2-202ENST00000361168 DCAF11Q8TEB1 546 aa25.96■■□□□ 1.75
CLK2-202ENST00000361168 STRCQ7RTU9 1775 aa25.96■■□□□ 1.75
CLK2-202ENST00000361168 ADGRF5Q8IZF2 1346 aa25.95■■□□□ 1.74
CLK2-202ENST00000361168 CLSPNQ9HAW4 1339 aa25.95■■□□□ 1.74
CLK2-202ENST00000361168 EID1Q9Y6B2 187 aa25.94■■□□□ 1.74
CLK2-202ENST00000361168 SCAF11Q99590 1463 aaKnown RBP25.94■■□□□ 1.74
CLK2-202ENST00000361168 PPP1R15AO75807 674 aaPredicted RBP25.93■■□□□ 1.74
CLK2-202ENST00000361168 NEURL4Q96JN8 1562 aa25.93■■□□□ 1.74
CLK2-202ENST00000361168 RPGRIP1LQ68CZ1 1315 aa25.91■■□□□ 1.74
CLK2-202ENST00000361168 PPLO60437 1756 aa25.9■■□□□ 1.74
CLK2-202ENST00000361168 SLC26A8Q96RN1 970 aa25.89■■□□□ 1.74
CLK2-202ENST00000361168 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.88■■□□□ 1.73
CLK2-202ENST00000361168 IFT172Q9UG01 1749 aa25.88■■□□□ 1.73
CLK2-202ENST00000361168 BCANQ96GW7 911 aa25.87■■□□□ 1.73
CLK2-202ENST00000361168 TONSLQ96HA7 1378 aa25.87■■□□□ 1.73
CLK2-202ENST00000361168 POLR1AO95602 1720 aaPredicted RBP25.87■■□□□ 1.73
CLK2-202ENST00000361168 VGFO15240 615 aaPredicted RBP25.86■■□□□ 1.73
CLK2-202ENST00000361168 HDGFP51858 240 aaKnown RBP25.86■■□□□ 1.73
CLK2-202ENST00000361168 NPHP4O75161 1426 aaPredicted RBP25.86■■□□□ 1.73
CLK2-202ENST00000361168 MED14O60244 1454 aa25.85■■□□□ 1.73
CLK2-202ENST00000361168 PLEKHG1Q9ULL1 1385 aa25.84■■□□□ 1.73
CLK2-202ENST00000361168 ADAMTS13Q76LX8 1427 aa25.81■■□□□ 1.72
CLK2-202ENST00000361168 NRXN3Q9Y4C0 1643 aa25.81■■□□□ 1.72
CLK2-202ENST00000361168 IQGAP1P46940 1657 aa25.8■■□□□ 1.72
CLK2-202ENST00000361168 MYOM2P54296 1465 aa25.8■■□□□ 1.72
CLK2-202ENST00000361168 PIK3C2GO75747 1445 aa25.8■■□□□ 1.72
CLK2-202ENST00000361168 NRXN1Q9ULB1 1477 aa25.79■■□□□ 1.72
CLK2-202ENST00000361168 NBPF8Q3BBV2 869 aa25.78■■□□□ 1.72
CLK2-202ENST00000361168 CFAP70Q5T0N1 1121 aa25.78■■□□□ 1.72
CLK2-202ENST00000361168 SETBP1Q9Y6X0 1596 aa25.75■■□□□ 1.71
CLK2-202ENST00000361168 PRAG1Q86YV5 1406 aa25.75■■□□□ 1.71
CLK2-202ENST00000361168 METP08581 1390 aa25.75■■□□□ 1.71
CLK2-202ENST00000361168 TMEM132EQ6IEE7 984 aa25.75■■□□□ 1.71
CLK2-202ENST00000361168 ALKQ9UM73 1620 aa25.72■■□□□ 1.71
CLK2-202ENST00000361168 DMRT2Q9Y5R5 561 aa25.72■■□□□ 1.71
CLK2-202ENST00000361168 NBPF1Q3BBV0 1214 aa25.71■■□□□ 1.71
CLK2-202ENST00000361168 C14orf93Q9H972 538 aaKnown RBP25.71■■□□□ 1.71
CLK2-202ENST00000361168 TBX22Q9Y458 520 aa25.71■■□□□ 1.71
CLK2-202ENST00000361168 ZNF335Q9H4Z2 1342 aaPredicted RBP25.71■■□□□ 1.71
CLK2-202ENST00000361168 STAC3Q96MF2 364 aa25.69■■□□□ 1.7
CLK2-202ENST00000361168 TIMELESSQ9UNS1 1208 aa25.69■■□□□ 1.7
CLK2-202ENST00000361168 SETD1AO15047 1707 aaKnown RBP25.68■■□□□ 1.7
CLK2-202ENST00000361168 ASXL1Q8IXJ9 1541 aa25.67■■□□□ 1.7
CLK2-202ENST00000361168 PTPRUQ92729 1446 aa25.67■■□□□ 1.7
CLK2-202ENST00000361168 RBM33Q96EV2 1170 aaKnown RBP25.63■■□□□ 1.69
CLK2-202ENST00000361168 STK26Q9P289 416 aa25.63■■□□□ 1.69
CLK2-202ENST00000361168 ADGRB1O14514 1584 aa25.61■■□□□ 1.69
CLK2-202ENST00000361168 KCNA6P17658 529 aa25.61■■□□□ 1.69
CLK2-202ENST00000361168 AMOTL2Q9Y2J4 779 aa25.61■■□□□ 1.69
CLK2-202ENST00000361168 DIP2AQ14689 1571 aa25.61■■□□□ 1.69
CLK2-202ENST00000361168 STRCP1A6NGW2 1772 aa25.61■■□□□ 1.69
CLK2-202ENST00000361168 TRPM1Q7Z4N2 1603 aa25.58■■□□□ 1.69
CLK2-202ENST00000361168 TRAK1Q9UPV9 953 aa25.56■■□□□ 1.68
CLK2-202ENST00000361168 ROCK2O75116 1388 aaKnown RBP25.56■■□□□ 1.68
CLK2-202ENST00000361168 YTHDC2Q9H6S0 1430 aaKnown RBP25.55■■□□□ 1.68
CLK2-202ENST00000361168 CHD2O14647 1828 aaKnown RBP25.55■■□□□ 1.68
CLK2-202ENST00000361168 LAMC1P11047 1609 aa25.55■■□□□ 1.68
CLK2-202ENST00000361168 PIK3R4Q99570 1358 aa25.54■■□□□ 1.68
CLK2-202ENST00000361168 ROBO2Q9HCK4 1378 aa25.53■■□□□ 1.68
CLK2-202ENST00000361168 KIAA1210Q9ULL0 1709 aa25.52■■□□□ 1.68
CLK2-202ENST00000361168 WAPLQ7Z5K2 1190 aa25.52■■□□□ 1.68
CLK2-202ENST00000361168 RALGAPBQ86X10 1494 aa25.52■■□□□ 1.68
CLK2-202ENST00000361168 LTBP4Q8N2S1 1624 aa25.52■■□□□ 1.68
CLK2-202ENST00000361168 LRPPRCP42704 1394 aaKnown RBP25.51■■□□□ 1.67
CLK2-202ENST00000361168 XRN1Q8IZH2 1706 aaKnown RBP25.5■■□□□ 1.67
CLK2-202ENST00000361168 NWD1Q149M9 1564 aa25.5■■□□□ 1.67
CLK2-202ENST00000361168 PLEKHH1Q9ULM0 1364 aa25.49■■□□□ 1.67
CLK2-202ENST00000361168 CARD11Q9BXL7 1154 aa25.49■■□□□ 1.67
CLK2-202ENST00000361168 ABCC11Q96J66 1382 aa25.49■■□□□ 1.67
CLK2-202ENST00000361168 SAFB2Q14151 953 aaKnown RBP eCLIP25.48■■□□□ 1.67
CLK2-202ENST00000361168 GPRASP1Q5JY77 1395 aa25.48■■□□□ 1.67
CLK2-202ENST00000361168 PROSER2Q86WR7 435 aaPredicted RBP25.47■■□□□ 1.67
CLK2-202ENST00000361168 PRAM1Q96QH2 718 aa25.45■■□□□ 1.67
CLK2-202ENST00000361168 LRRC7Q96NW7 1537 aa25.45■■□□□ 1.66
CLK2-202ENST00000361168 TECPR2O15040 1411 aa25.45■■□□□ 1.66
CLK2-202ENST00000361168 TMEM94Q12767 1356 aa25.45■■□□□ 1.66
CLK2-202ENST00000361168 NKTRP30414 1462 aaKnown RBP25.42■■□□□ 1.66
CLK2-202ENST00000361168 PTCH1Q13635 1447 aa25.42■■□□□ 1.66
CLK2-202ENST00000361168 CPS1P31327 1500 aa25.41■■□□□ 1.66
CLK2-202ENST00000361168 KNDC1Q76NI1 1749 aa25.38■■□□□ 1.65
CLK2-202ENST00000361168 POGKQ9P215 609 aa25.38■■□□□ 1.65
CLK2-202ENST00000361168 ARHGEF28Q8N1W1 1705 aaKnown RBP25.38■■□□□ 1.65
CLK2-202ENST00000361168 XIRP1Q702N8 1843 aaKnown RBP25.38■■□□□ 1.65
CLK2-202ENST00000361168 HIRIP3Q9BW71 556 aaPredicted RBP25.37■■□□□ 1.65
CLK2-202ENST00000361168 FAM135BQ49AJ0 1406 aa25.36■■□□□ 1.65
CLK2-202ENST00000361168 DLC1Q96QB1 1528 aa25.36■■□□□ 1.65
CLK2-202ENST00000361168 C14orf37Q86TY3 774 aa25.35■■□□□ 1.65
CLK2-202ENST00000361168 USP47Q96K76 1375 aa25.35■■□□□ 1.65
CLK2-202ENST00000361168 ST20-MTHFSA0A0A6YYL1 179 aa25.34■■□□□ 1.65
CLK2-202ENST00000361168 SIRT1Q96EB6 747 aa25.34■■□□□ 1.65
CLK2-202ENST00000361168 MINK1Q8N4C8 1332 aaPredicted RBP25.34■■□□□ 1.65
CLK2-202ENST00000361168 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.34■■□□□ 1.65
CLK2-202ENST00000361168 CENPJQ9HC77 1338 aaPredicted RBP25.32■■□□□ 1.64
CLK2-202ENST00000361168 CERKQ8TCT0 537 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms