RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 ARHGAP23Q9P227 1491 aa9.38□□□□□ -0.91
SUDS3-201ENST00000360286 RIMS2Q9UQ26 1411 aa9.38□□□□□ -0.91
SUDS3-201ENST00000360286 SLIT1O75093 1534 aa9.37□□□□□ -0.91
SUDS3-201ENST00000360286 KDM5AP29375 1690 aaKnown RBP9.37□□□□□ -0.91
SUDS3-201ENST00000360286 HDGFP51858 240 aaKnown RBP9.37□□□□□ -0.91
SUDS3-201ENST00000360286 PPP1R15AO75807 674 aaPredicted RBP9.36□□□□□ -0.91
SUDS3-201ENST00000360286 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.36□□□□□ -0.91
SUDS3-201ENST00000360286 BCANQ96GW7 911 aa9.36□□□□□ -0.91
SUDS3-201ENST00000360286 DMRT2Q9Y5R5 561 aa9.36□□□□□ -0.91
SUDS3-201ENST00000360286 ZFYVE9O95405 1425 aa9.36□□□□□ -0.91
SUDS3-201ENST00000360286 NPHP4O75161 1426 aaPredicted RBP9.35□□□□□ -0.91
SUDS3-201ENST00000360286 SPATA31E1Q6ZUB1 1445 aa9.35□□□□□ -0.91
SUDS3-201ENST00000360286 SCAF11Q99590 1463 aaKnown RBP9.34□□□□□ -0.91
SUDS3-201ENST00000360286 RPGRIP1LQ68CZ1 1315 aa9.34□□□□□ -0.91
SUDS3-201ENST00000360286 POLR1AO95602 1720 aaPredicted RBP9.34□□□□□ -0.91
SUDS3-201ENST00000360286 NEURL4Q96JN8 1562 aa9.34□□□□□ -0.91
SUDS3-201ENST00000360286 SLC26A8Q96RN1 970 aa9.34□□□□□ -0.91
SUDS3-201ENST00000360286 KDM2AQ9Y2K7 1162 aa9.34□□□□□ -0.91
SUDS3-201ENST00000360286 NEXMIFQ5QGS0 1516 aa9.33□□□□□ -0.92
SUDS3-201ENST00000360286 DCAF11Q8TEB1 546 aa9.33□□□□□ -0.92
SUDS3-201ENST00000360286 MED14O60244 1454 aa9.33□□□□□ -0.92
SUDS3-201ENST00000360286 ADGRF5Q8IZF2 1346 aa9.32□□□□□ -0.92
SUDS3-201ENST00000360286 VGFO15240 615 aaPredicted RBP9.32□□□□□ -0.92
SUDS3-201ENST00000360286 CCER1Q8TC90 406 aaPredicted RBP9.32□□□□□ -0.92
SUDS3-201ENST00000360286 PLEKHG1Q9ULL1 1385 aa9.32□□□□□ -0.92
SUDS3-201ENST00000360286 IQGAP1P46940 1657 aa9.31□□□□□ -0.92
SUDS3-201ENST00000360286 PPLO60437 1756 aa9.31□□□□□ -0.92
SUDS3-201ENST00000360286 ZNF335Q9H4Z2 1342 aaPredicted RBP9.31□□□□□ -0.92
SUDS3-201ENST00000360286 L3MBTL2Q969R5 705 aa9.3□□□□□ -0.92
SUDS3-201ENST00000360286 TBX22Q9Y458 520 aa9.29□□□□□ -0.92
SUDS3-201ENST00000360286 ADAMTS13Q76LX8 1427 aa9.29□□□□□ -0.92
SUDS3-201ENST00000360286 IFT172Q9UG01 1749 aa9.28□□□□□ -0.92
SUDS3-201ENST00000360286 CFAP70Q5T0N1 1121 aa9.28□□□□□ -0.92
SUDS3-201ENST00000360286 NRXN3Q9Y4C0 1643 aa9.27□□□□□ -0.93
SUDS3-201ENST00000360286 METP08581 1390 aa9.26□□□□□ -0.93
SUDS3-201ENST00000360286 KCNA6P17658 529 aa9.26□□□□□ -0.93
SUDS3-201ENST00000360286 MYT1Q01538 1121 aa9.26□□□□□ -0.93
SUDS3-201ENST00000360286 TMEM132EQ6IEE7 984 aa9.26□□□□□ -0.93
SUDS3-201ENST00000360286 RBM33Q96EV2 1170 aaKnown RBP9.26□□□□□ -0.93
SUDS3-201ENST00000360286 C14orf93Q9H972 538 aaKnown RBP9.26□□□□□ -0.93
SUDS3-201ENST00000360286 SETBP1Q9Y6X0 1596 aa9.25□□□□□ -0.93
SUDS3-201ENST00000360286 STRCP1A6NGW2 1772 aa9.25□□□□□ -0.93
SUDS3-201ENST00000360286 PTPRUQ92729 1446 aa9.25□□□□□ -0.93
SUDS3-201ENST00000360286 ALKQ9UM73 1620 aa9.25□□□□□ -0.93
SUDS3-201ENST00000360286 STAC3Q96MF2 364 aa9.25□□□□□ -0.93
SUDS3-201ENST00000360286 AMOTL2Q9Y2J4 779 aa9.25□□□□□ -0.93
SUDS3-201ENST00000360286 CLSPNQ9HAW4 1339 aa9.25□□□□□ -0.93
SUDS3-201ENST00000360286 TONSLQ96HA7 1378 aa9.24□□□□□ -0.93
SUDS3-201ENST00000360286 PIK3C2GO75747 1445 aa9.24□□□□□ -0.93
SUDS3-201ENST00000360286 MYOM2P54296 1465 aa9.24□□□□□ -0.93
SUDS3-201ENST00000360286 NRXN1Q9ULB1 1477 aa9.24□□□□□ -0.93
SUDS3-201ENST00000360286 NBPF8Q3BBV2 869 aa9.24□□□□□ -0.93
SUDS3-201ENST00000360286 STK26Q9P289 416 aa9.24□□□□□ -0.93
SUDS3-201ENST00000360286 CHD2O14647 1828 aaKnown RBP9.24□□□□□ -0.93
SUDS3-201ENST00000360286 LTBP4Q8N2S1 1624 aa9.23□□□□□ -0.93
SUDS3-201ENST00000360286 NBPF1Q3BBV0 1214 aa9.23□□□□□ -0.93
SUDS3-201ENST00000360286 PROSER2Q86WR7 435 aaPredicted RBP9.23□□□□□ -0.93
SUDS3-201ENST00000360286 CERKQ8TCT0 537 aa9.23□□□□□ -0.93
SUDS3-201ENST00000360286 SETD1AO15047 1707 aaKnown RBP9.22□□□□□ -0.93
SUDS3-201ENST00000360286 DIP2AQ14689 1571 aa9.22□□□□□ -0.93
SUDS3-201ENST00000360286 PIK3R4Q99570 1358 aa9.22□□□□□ -0.93
SUDS3-201ENST00000360286 PRAG1Q86YV5 1406 aa9.21□□□□□ -0.94
SUDS3-201ENST00000360286 WAPLQ7Z5K2 1190 aa9.2□□□□□ -0.94
SUDS3-201ENST00000360286 TIMELESSQ9UNS1 1208 aa9.2□□□□□ -0.94
SUDS3-201ENST00000360286 TRAK1Q9UPV9 953 aa9.2□□□□□ -0.94
SUDS3-201ENST00000360286 ASXL1Q8IXJ9 1541 aa9.2□□□□□ -0.94
SUDS3-201ENST00000360286 LRRC7Q96NW7 1537 aa9.2□□□□□ -0.94
SUDS3-201ENST00000360286 LRPPRCP42704 1394 aaKnown RBP9.19□□□□□ -0.94
SUDS3-201ENST00000360286 CPS1P31327 1500 aa9.19□□□□□ -0.94
SUDS3-201ENST00000360286 TMEM94Q12767 1356 aa9.18□□□□□ -0.94
SUDS3-201ENST00000360286 NWD1Q149M9 1564 aa9.18□□□□□ -0.94
SUDS3-201ENST00000360286 XIRP1Q702N8 1843 aaKnown RBP9.18□□□□□ -0.94
SUDS3-201ENST00000360286 YTHDC2Q9H6S0 1430 aaKnown RBP9.18□□□□□ -0.94
SUDS3-201ENST00000360286 ROBO2Q9HCK4 1378 aa9.18□□□□□ -0.94
SUDS3-201ENST00000360286 ADGRB1O14514 1584 aa9.17□□□□□ -0.94
SUDS3-201ENST00000360286 ABCC11Q96J66 1382 aa9.17□□□□□ -0.94
SUDS3-201ENST00000360286 XRN1Q8IZH2 1706 aaKnown RBP9.17□□□□□ -0.94
SUDS3-201ENST00000360286 LAMC1P11047 1609 aa9.16□□□□□ -0.94
SUDS3-201ENST00000360286 PLEKHH1Q9ULM0 1364 aa9.16□□□□□ -0.94
SUDS3-201ENST00000360286 SAFB2Q14151 953 aaKnown RBP eCLIP9.16□□□□□ -0.94
SUDS3-201ENST00000360286 C14orf37Q86TY3 774 aa9.16□□□□□ -0.94
SUDS3-201ENST00000360286 SIRT1Q96EB6 747 aa9.16□□□□□ -0.94
SUDS3-201ENST00000360286 PRAM1Q96QH2 718 aa9.16□□□□□ -0.94
SUDS3-201ENST00000360286 KIAA1210Q9ULL0 1709 aa9.16□□□□□ -0.94
SUDS3-201ENST00000360286 TRPM1Q7Z4N2 1603 aa9.16□□□□□ -0.94
SUDS3-201ENST00000360286 NKTRP30414 1462 aaKnown RBP9.15□□□□□ -0.94
SUDS3-201ENST00000360286 ROCK2O75116 1388 aaKnown RBP9.15□□□□□ -0.94
SUDS3-201ENST00000360286 POGKQ9P215 609 aa9.15□□□□□ -0.94
SUDS3-201ENST00000360286 UBAP1LF5GYI3 381 aa9.14□□□□□ -0.95
SUDS3-201ENST00000360286 CARD11Q9BXL7 1154 aa9.14□□□□□ -0.95
SUDS3-201ENST00000360286 C19orf44Q9H6X5 657 aa9.14□□□□□ -0.95
SUDS3-201ENST00000360286 TECPR2O15040 1411 aa9.14□□□□□ -0.95
SUDS3-201ENST00000360286 PTCH1Q13635 1447 aa9.14□□□□□ -0.95
SUDS3-201ENST00000360286 KNDC1Q76NI1 1749 aa9.13□□□□□ -0.95
SUDS3-201ENST00000360286 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.13□□□□□ -0.95
SUDS3-201ENST00000360286 NCOA3Q9Y6Q9 1424 aa9.13□□□□□ -0.95
SUDS3-201ENST00000360286 MSH6P52701 1360 aa9.12□□□□□ -0.95
SUDS3-201ENST00000360286 MINK1Q8N4C8 1332 aaPredicted RBP9.12□□□□□ -0.95
SUDS3-201ENST00000360286 TOM1O60784 492 aa9.12□□□□□ -0.95
SUDS3-201ENST00000360286 PIP4K2BP78356 416 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms