RNA–Protein interactions for RNA: ENST00000359492.6

APOA1-202, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOA1, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-202ENST00000359492 NKTRP30414 1462 aaKnown RBP21.38■■□□□ 1.01
APOA1-202ENST00000359492 UNC13BO14795 1591 aa21.36■■□□□ 1.01
APOA1-202ENST00000359492 RBM33Q96EV2 1170 aaKnown RBP21.36■■□□□ 1.01
APOA1-202ENST00000359492 PHF23Q9BUL5 403 aaPredicted RBP21.36■■□□□ 1.01
APOA1-202ENST00000359492 ROBO1Q9Y6N7 1651 aa21.36■■□□□ 1.01
APOA1-202ENST00000359492 GCC2Q8IWJ2 1684 aa21.35■■□□□ 1.01
APOA1-202ENST00000359492 CHD2O14647 1828 aaKnown RBP21.35■■□□□ 1.01
APOA1-202ENST00000359492 FAM50AQ14320 339 aaKnown RBP21.34■■□□□ 1.01
APOA1-202ENST00000359492 PROSER2Q86WR7 435 aaPredicted RBP21.34■■□□□ 1.01
APOA1-202ENST00000359492 PLEKHG1Q9ULL1 1385 aa21.34■■□□□ 1.01
APOA1-202ENST00000359492 E9PCH4 1651 aa21.32■■□□□ 1
APOA1-202ENST00000359492 RIMS2Q9UQ26 1411 aa21.31■■□□□ 1
APOA1-202ENST00000359492 ADAMTS13Q76LX8 1427 aa21.29■■□□□ 1
APOA1-202ENST00000359492 IQGAP3Q86VI3 1631 aa21.28■■□□□ 1
APOA1-202ENST00000359492 ROCK1Q13464 1354 aa21.27■■□□□ 1
APOA1-202ENST00000359492 TBX22Q9Y458 520 aa21.26■□□□□ 0.99
APOA1-202ENST00000359492 MSH6P52701 1360 aa21.24■□□□□ 0.99
APOA1-202ENST00000359492 POTEAQ6S8J7 498 aa21.24■□□□□ 0.99
APOA1-202ENST00000359492 SLAIN2Q9P270 581 aa21.24■□□□□ 0.99
APOA1-202ENST00000359492 NCOA3Q9Y6Q9 1424 aa21.22■□□□□ 0.99
APOA1-202ENST00000359492 COL16A1Q07092 1604 aaPredicted RBP21.21■□□□□ 0.99
APOA1-202ENST00000359492 PHLPP1O60346 1717 aa21.21■□□□□ 0.99
APOA1-202ENST00000359492 DIP2AQ14689 1571 aa21.2■□□□□ 0.98
APOA1-202ENST00000359492 BCANQ96GW7 911 aa21.19■□□□□ 0.98
APOA1-202ENST00000359492 HDGFP51858 240 aaKnown RBP21.18■□□□□ 0.98
APOA1-202ENST00000359492 PIK3R4Q99570 1358 aa21.18■□□□□ 0.98
APOA1-202ENST00000359492 PTPRUQ92729 1446 aa21.18■□□□□ 0.98
APOA1-202ENST00000359492 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.18■□□□□ 0.98
APOA1-202ENST00000359492 PPP1R15AO75807 674 aaPredicted RBP21.17■□□□□ 0.98
APOA1-202ENST00000359492 NUTM2DQ5VT03 806 aaPredicted RBP21.17■□□□□ 0.98
APOA1-202ENST00000359492 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.17■□□□□ 0.98
APOA1-202ENST00000359492 NRXN3Q9Y4C0 1643 aa21.16■□□□□ 0.98
APOA1-202ENST00000359492 NUP155O75694 1391 aa21.15■□□□□ 0.98
APOA1-202ENST00000359492 JCADQ9P266 1359 aa21.14■□□□□ 0.98
APOA1-202ENST00000359492 CHGAP10645 457 aaKnown RBP21.14■□□□□ 0.97
APOA1-202ENST00000359492 AHDC1Q5TGY3 1603 aaPredicted RBP21.13■□□□□ 0.97
APOA1-202ENST00000359492 LRP6O75581 1613 aa21.12■□□□□ 0.97
APOA1-202ENST00000359492 TRPM2O94759 1503 aa21.11■□□□□ 0.97
APOA1-202ENST00000359492 XRN1Q8IZH2 1706 aaKnown RBP21.11■□□□□ 0.97
APOA1-202ENST00000359492 SETBP1Q9Y6X0 1596 aa21.1■□□□□ 0.97
APOA1-202ENST00000359492 C19orf44Q9H6X5 657 aa21.1■□□□□ 0.97
APOA1-202ENST00000359492 SPHKAPQ2M3C7 1700 aa21.09■□□□□ 0.97
APOA1-202ENST00000359492 AMOTL2Q9Y2J4 779 aa21.08■□□□□ 0.97
APOA1-202ENST00000359492 CADPS2Q86UW7 1296 aa21.07■□□□□ 0.96
APOA1-202ENST00000359492 SHPRHQ149N8 1683 aa21.07■□□□□ 0.96
APOA1-202ENST00000359492 SETD1AO15047 1707 aaKnown RBP21.07■□□□□ 0.96
APOA1-202ENST00000359492 DCCP43146 1447 aa21.04■□□□□ 0.96
APOA1-202ENST00000359492 ITGAEP38570 1179 aa21.04■□□□□ 0.96
APOA1-202ENST00000359492 BRINP3Q76B58 766 aa21.04■□□□□ 0.96
APOA1-202ENST00000359492 METP08581 1390 aa21.04■□□□□ 0.96
APOA1-202ENST00000359492 SPATA31A6Q5VVP1 1343 aa21.04■□□□□ 0.96
APOA1-202ENST00000359492 CLTCL1P53675 1640 aa21.03■□□□□ 0.96
APOA1-202ENST00000359492 PPARGC1BQ86YN6 1023 aaKnown RBP21.02■□□□□ 0.96
APOA1-202ENST00000359492 NEXMIFQ5QGS0 1516 aa21.02■□□□□ 0.96
APOA1-202ENST00000359492 ATF3P18847 181 aa21.01■□□□□ 0.95
APOA1-202ENST00000359492 C14orf37Q86TY3 774 aa21.01■□□□□ 0.95
APOA1-202ENST00000359492 MST1RQ04912 1400 aa21.01■□□□□ 0.95
APOA1-202ENST00000359492 ASXL1Q8IXJ9 1541 aa20.99■□□□□ 0.95
APOA1-202ENST00000359492 NHSL1Q5SYE7 1610 aa20.99■□□□□ 0.95
APOA1-202ENST00000359492 RRBP1Q9P2E9 1410 aaKnown RBP20.98■□□□□ 0.95
APOA1-202ENST00000359492 NAIPQ13075 1403 aa20.97■□□□□ 0.95
APOA1-202ENST00000359492 SETD5Q9C0A6 1442 aa20.96■□□□□ 0.95
APOA1-202ENST00000359492 NALCNQ8IZF0 1738 aa20.95■□□□□ 0.94
APOA1-202ENST00000359492 ADGRL3Q9HAR2 1447 aa20.95■□□□□ 0.94
APOA1-202ENST00000359492 ZNF326Q5BKZ1 582 aaKnown RBP20.92■□□□□ 0.94
APOA1-202ENST00000359492 KIF1BO60333 1816 aa20.91■□□□□ 0.94
APOA1-202ENST00000359492 PRAG1Q86YV5 1406 aa20.9■□□□□ 0.94
APOA1-202ENST00000359492 ZNF772Q68DY9 489 aaPredicted RBP20.9■□□□□ 0.94
APOA1-202ENST00000359492 LAMC1P11047 1609 aa20.89■□□□□ 0.94
APOA1-202ENST00000359492 DDX17Q92841 729 aaKnown RBP20.89■□□□□ 0.93
APOA1-202ENST00000359492 PTCH1Q13635 1447 aa20.87■□□□□ 0.93
APOA1-202ENST00000359492 MEX3CQ5U5Q3 659 aaKnown RBP20.87■□□□□ 0.93
APOA1-202ENST00000359492 UPF1Q92900 1129 aaKnown RBP eCLIP20.87■□□□□ 0.93
APOA1-202ENST00000359492 C1orf167Q5SNV9 1468 aa20.86■□□□□ 0.93
APOA1-202ENST00000359492 CDK12Q9NYV4 1490 aaPredicted RBP20.86■□□□□ 0.93
APOA1-202ENST00000359492 PNPLA6Q8IY17 1366 aa20.85■□□□□ 0.93
APOA1-202ENST00000359492 ROBO2Q9HCK4 1378 aa20.85■□□□□ 0.93
APOA1-202ENST00000359492 HFM1A2PYH4 1435 aa20.85■□□□□ 0.93
APOA1-202ENST00000359492 NUTM2BA6NNL0 878 aaPredicted RBP20.84■□□□□ 0.93
APOA1-202ENST00000359492 NUTM2EB1AL46 878 aaPredicted RBP20.84■□□□□ 0.93
APOA1-202ENST00000359492 NUTM2AQ8IVF1 878 aaPredicted RBP20.84■□□□□ 0.93
APOA1-202ENST00000359492 LRRC59Q96AG4 307 aaKnown RBP20.84■□□□□ 0.93
APOA1-202ENST00000359492 AFF2P51816 1311 aa20.83■□□□□ 0.93
APOA1-202ENST00000359492 TRIM52Q96A61 297 aa20.83■□□□□ 0.93
APOA1-202ENST00000359492 PPLO60437 1756 aa20.82■□□□□ 0.92
APOA1-202ENST00000359492 RXRBP28702 533 aa20.81■□□□□ 0.92
APOA1-202ENST00000359492 SOS2Q07890 1332 aaPredicted RBP20.79■□□□□ 0.92
APOA1-202ENST00000359492 VGFO15240 615 aaPredicted RBP20.79■□□□□ 0.92
APOA1-202ENST00000359492 RPGRIP1LQ68CZ1 1315 aa20.78■□□□□ 0.92
APOA1-202ENST00000359492 ORAI2Q96SN7 254 aa20.78■□□□□ 0.92
APOA1-202ENST00000359492 RGS12O14924 1447 aa20.76■□□□□ 0.91
APOA1-202ENST00000359492 SRCAPQ6ZRS2 3230 aa20.76■□□□□ 0.91
APOA1-202ENST00000359492 SLC4A1APQ9BWU0 796 aaKnown RBP20.74■□□□□ 0.91
APOA1-202ENST00000359492 C8orf37Q96NL8 207 aa20.73■□□□□ 0.91
APOA1-202ENST00000359492 COL22A1Q8NFW1 1626 aaPredicted RBP20.73■□□□□ 0.91
APOA1-202ENST00000359492 SPATA31E1Q6ZUB1 1445 aa20.72■□□□□ 0.91
APOA1-202ENST00000359492 QTRT2Q9H974 415 aaKnown RBP20.72■□□□□ 0.91
APOA1-202ENST00000359492 CDC42BPGQ6DT37 1551 aa20.72■□□□□ 0.91
APOA1-202ENST00000359492 EP400Q96L91 3159 aa20.71■□□□□ 0.91
APOA1-202ENST00000359492 IFT172Q9UG01 1749 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms