RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 WDR43Q15061 677 aaKnown RBP eCLIP14.22□□□□□ -0.13
RPE-202ENST00000359429 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
RPE-202ENST00000359429 KNSTRNQ9Y448 316 aa14.21□□□□□ -0.13
RPE-202ENST00000359429 RSPH4AQ5TD94 716 aa14.21□□□□□ -0.14
RPE-202ENST00000359429 CDC42BPBQ9Y5S2 1711 aa14.2□□□□□ -0.14
RPE-202ENST00000359429 SLFN5Q08AF3 891 aa14.2□□□□□ -0.14
RPE-202ENST00000359429 CCDC146Q8IYE0 955 aa14.2□□□□□ -0.14
RPE-202ENST00000359429 SYCP2Q9BX26 1530 aa14.2□□□□□ -0.14
RPE-202ENST00000359429 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.19□□□□□ -0.14
RPE-202ENST00000359429 UNC13BO14795 1591 aa14.19□□□□□ -0.14
RPE-202ENST00000359429 DAXXQ9UER7 740 aaPredicted RBP14.19□□□□□ -0.14
RPE-202ENST00000359429 FRAT2O75474 233 aaPredicted RBP14.18□□□□□ -0.14
RPE-202ENST00000359429 BCAR3O75815 825 aa14.18□□□□□ -0.14
RPE-202ENST00000359429 MYO5CQ9NQX4 1742 aa14.17□□□□□ -0.14
RPE-202ENST00000359429 TRMT2AQ8IZ69 625 aaKnown RBP14.17□□□□□ -0.14
RPE-202ENST00000359429 PREX2Q70Z35 1606 aa14.16□□□□□ -0.14
RPE-202ENST00000359429 EIF2AK4Q9P2K8 1649 aaKnown RBP14.16□□□□□ -0.14
RPE-202ENST00000359429 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.16□□□□□ -0.14
RPE-202ENST00000359429 APAF1O14727 1248 aa14.15□□□□□ -0.14
RPE-202ENST00000359429 IGHDP01880 384 aa14.15□□□□□ -0.14
RPE-202ENST00000359429 ATP10AO60312 1499 aa14.15□□□□□ -0.14
RPE-202ENST00000359429 IQGAP3Q86VI3 1631 aa14.15□□□□□ -0.15
RPE-202ENST00000359429 USP19O94966 1318 aa14.14□□□□□ -0.15
RPE-202ENST00000359429 RNF17Q9BXT8 1623 aaKnown RBP14.13□□□□□ -0.15
RPE-202ENST00000359429 ARHGAP5Q13017 1502 aa14.13□□□□□ -0.15
RPE-202ENST00000359429 CHD1O14646 1710 aa14.13□□□□□ -0.15
RPE-202ENST00000359429 MAST1Q9Y2H9 1570 aa14.13□□□□□ -0.15
RPE-202ENST00000359429 TTC37Q6PGP7 1564 aa14.12□□□□□ -0.15
RPE-202ENST00000359429 SEC24BO95487 1268 aa14.12□□□□□ -0.15
RPE-202ENST00000359429 PIK3C2GO75747 1445 aa14.11□□□□□ -0.15
RPE-202ENST00000359429 EIF3AQ14152 1382 aaKnown RBP14.11□□□□□ -0.15
RPE-202ENST00000359429 CLASP1Q7Z460 1538 aa14.11□□□□□ -0.15
RPE-202ENST00000359429 ASXL1Q8IXJ9 1541 aa14.11□□□□□ -0.15
RPE-202ENST00000359429 NKTRP30414 1462 aaKnown RBP14.1□□□□□ -0.15
RPE-202ENST00000359429 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.1□□□□□ -0.15
RPE-202ENST00000359429 MADDQ8WXG6 1647 aa14.09□□□□□ -0.15
RPE-202ENST00000359429 PLXNC1O60486 1568 aa14.08□□□□□ -0.16
RPE-202ENST00000359429 SYNMO15061 1565 aa14.08□□□□□ -0.16
RPE-202ENST00000359429 DUOX2Q9NRD8 1548 aa14.08□□□□□ -0.16
RPE-202ENST00000359429 IQGAP1P46940 1657 aa14.07□□□□□ -0.16
RPE-202ENST00000359429 SCAF11Q99590 1463 aaKnown RBP14.07□□□□□ -0.16
RPE-202ENST00000359429 E9PSI1 815 aa14.07□□□□□ -0.16
RPE-202ENST00000359429 CDCA8Q53HL2 280 aa14.07□□□□□ -0.16
RPE-202ENST00000359429 PANK1Q8TE04 598 aa14.07□□□□□ -0.16
RPE-202ENST00000359429 COG6Q9Y2V7 657 aa14.06□□□□□ -0.16
RPE-202ENST00000359429 NPC1L1Q9UHC9 1359 aa14.06□□□□□ -0.16
RPE-202ENST00000359429 CARD14Q9BXL6 1004 aa14.06□□□□□ -0.16
RPE-202ENST00000359429 ABCC2Q92887 1545 aa14.05□□□□□ -0.16
RPE-202ENST00000359429 MYOM1P52179 1685 aa14.04□□□□□ -0.16
RPE-202ENST00000359429 CLUAP1Q96AJ1 413 aa14.04□□□□□ -0.16
RPE-202ENST00000359429 POGKQ9P215 609 aa14.04□□□□□ -0.16
RPE-202ENST00000359429 SCAPERQ9BY12 1400 aa14.03□□□□□ -0.16
RPE-202ENST00000359429 PDE3AQ14432 1141 aa14.03□□□□□ -0.16
RPE-202ENST00000359429 WWC1Q8IX03 1113 aa14.03□□□□□ -0.16
RPE-202ENST00000359429 CGNL1Q0VF96 1302 aa14.03□□□□□ -0.16
RPE-202ENST00000359429 SLKQ9H2G2 1235 aaPredicted RBP14.02□□□□□ -0.16
RPE-202ENST00000359429 TNNQ9UQP3 1299 aa14.02□□□□□ -0.16
RPE-202ENST00000359429 CENPJQ9HC77 1338 aaPredicted RBP14.02□□□□□ -0.16
RPE-202ENST00000359429 TRAPPC8Q9Y2L5 1435 aa14.02□□□□□ -0.16
RPE-202ENST00000359429 NLRP1Q9C000 1473 aa14.01□□□□□ -0.17
RPE-202ENST00000359429 CFAP70Q5T0N1 1121 aa14.01□□□□□ -0.17
RPE-202ENST00000359429 NEUROD2Q15784 382 aa14□□□□□ -0.17
RPE-202ENST00000359429 SHROOM2Q13796 1616 aa14□□□□□ -0.17
RPE-202ENST00000359429 CANXP27824 592 aaKnown RBP14□□□□□ -0.17
RPE-202ENST00000359429 RRP7AQ9Y3A4 280 aaKnown RBP14□□□□□ -0.17
RPE-202ENST00000359429 PCDHB15Q9Y5E8 787 aa14□□□□□ -0.17
RPE-202ENST00000359429 RLBP1P12271 317 aa13.99□□□□□ -0.17
RPE-202ENST00000359429 MAPK8IP3Q9UPT6 1336 aa13.99□□□□□ -0.17
RPE-202ENST00000359429 TRPM2O94759 1503 aa13.99□□□□□ -0.17
RPE-202ENST00000359429 AFAP1Q8N556 730 aa13.99□□□□□ -0.17
RPE-202ENST00000359429 ERVK-7P63135 1459 aa13.99□□□□□ -0.17
RPE-202ENST00000359429 PTPRTO14522 1441 aa13.99□□□□□ -0.17
RPE-202ENST00000359429 ANTXR1Q9H6X2 564 aa13.98□□□□□ -0.17
RPE-202ENST00000359429 CLTCL1P53675 1640 aa13.98□□□□□ -0.17
RPE-202ENST00000359429 SPHKAPQ2M3C7 1700 aa13.98□□□□□ -0.17
RPE-202ENST00000359429 PLCH2O75038 1416 aa13.98□□□□□ -0.17
RPE-202ENST00000359429 RARSP54136 660 aaKnown RBP13.97□□□□□ -0.17
RPE-202ENST00000359429 EFCAB2Q5VUJ9 269 aa13.97□□□□□ -0.17
RPE-202ENST00000359429 BCL2L13Q9BXK5 485 aa13.97□□□□□ -0.17
RPE-202ENST00000359429 ADGRF5Q8IZF2 1346 aa13.97□□□□□ -0.17
RPE-202ENST00000359429 TNNT2P45379 298 aaPredicted RBP13.96□□□□□ -0.17
RPE-202ENST00000359429 FAM43AQ8N2R8 423 aa13.96□□□□□ -0.17
RPE-202ENST00000359429 STAC3Q96MF2 364 aa13.96□□□□□ -0.17
RPE-202ENST00000359429 EIF5BO60841 1220 aaKnown RBP13.95□□□□□ -0.18
RPE-202ENST00000359429 BECN1Q14457 450 aa13.95□□□□□ -0.18
RPE-202ENST00000359429 POLR3AO14802 1390 aaPredicted RBP13.95□□□□□ -0.18
RPE-202ENST00000359429 NGEFQ8N5V2 710 aa13.95□□□□□ -0.18
RPE-202ENST00000359429 PDZRN3Q9UPQ7 1066 aa13.95□□□□□ -0.18
RPE-202ENST00000359429 SPAG9O60271 1321 aaKnown RBP13.95□□□□□ -0.18
RPE-202ENST00000359429 KDM5AP29375 1690 aaKnown RBP13.95□□□□□ -0.18
RPE-202ENST00000359429 ERCC6L2Q5T890 1561 aa13.95□□□□□ -0.18
RPE-202ENST00000359429 VIRMAQ69YN4 1812 aaKnown RBP13.94□□□□□ -0.18
RPE-202ENST00000359429 TBC1D2Q9BYX2 928 aa13.94□□□□□ -0.18
RPE-202ENST00000359429 NINLQ9Y2I6 1382 aa13.94□□□□□ -0.18
RPE-202ENST00000359429 TBC1D32Q96NH3 1257 aa13.94□□□□□ -0.18
RPE-202ENST00000359429 CEP152O94986 1710 aa13.94□□□□□ -0.18
RPE-202ENST00000359429 ABCC1P33527 1531 aa13.93□□□□□ -0.18
RPE-202ENST00000359429 TCP11L2Q8N4U5 519 aa13.93□□□□□ -0.18
RPE-202ENST00000359429 UGGT1Q9NYU2 1555 aa13.92□□□□□ -0.18
RPE-202ENST00000359429 PMFBP1Q8TBY8 1022 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms