RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 DIP2BQ9P265 1576 aa7.1□□□□□ -1.27
ATXN3-202ENST00000359366 ATP10AO60312 1499 aa7.1□□□□□ -1.27
ATXN3-202ENST00000359366 CHGAP10645 457 aaKnown RBP7.1□□□□□ -1.27
ATXN3-202ENST00000359366 CEP152O94986 1710 aa7.1□□□□□ -1.27
ATXN3-202ENST00000359366 KDM5CP41229 1560 aa7.1□□□□□ -1.27
ATXN3-202ENST00000359366 HECW2Q9P2P5 1572 aa7.1□□□□□ -1.27
ATXN3-202ENST00000359366 KANK1Q14678 1352 aa7.1□□□□□ -1.27
ATXN3-202ENST00000359366 CFAP74Q9C0B2 1584 aa7.09□□□□□ -1.27
ATXN3-202ENST00000359366 KIF7Q2M1P5 1343 aa7.09□□□□□ -1.27
ATXN3-202ENST00000359366 DEPDC5O75140 1603 aa7.09□□□□□ -1.27
ATXN3-202ENST00000359366 ST20-MTHFSA0A0A6YYL1 179 aa7.09□□□□□ -1.27
ATXN3-202ENST00000359366 ROCK2O75116 1388 aaKnown RBP7.09□□□□□ -1.27
ATXN3-202ENST00000359366 SPATA31E1Q6ZUB1 1445 aa7.09□□□□□ -1.27
ATXN3-202ENST00000359366 NEO1Q92859 1461 aa7.09□□□□□ -1.27
ATXN3-202ENST00000359366 BCORL1Q5H9F3 1711 aa7.09□□□□□ -1.28
ATXN3-202ENST00000359366 WASHC2CQ9Y4E1 1318 aa7.08□□□□□ -1.28
ATXN3-202ENST00000359366 CCDC7Q96M83 1385 aa7.08□□□□□ -1.28
ATXN3-202ENST00000359366 CLTCL1P53675 1640 aa7.08□□□□□ -1.28
ATXN3-202ENST00000359366 RICTORQ6R327 1708 aa7.08□□□□□ -1.28
ATXN3-202ENST00000359366 MLECQ14165 292 aa7.08□□□□□ -1.28
ATXN3-202ENST00000359366 NUTM2DQ5VT03 806 aaPredicted RBP7.08□□□□□ -1.28
ATXN3-202ENST00000359366 MLH3Q9UHC1 1453 aa7.08□□□□□ -1.28
ATXN3-202ENST00000359366 PPRC1Q5VV67 1664 aaKnown RBP7.08□□□□□ -1.28
ATXN3-202ENST00000359366 SPHKAPQ2M3C7 1700 aa7.08□□□□□ -1.28
ATXN3-202ENST00000359366 ANP32CO43423 234 aa7.08□□□□□ -1.28
ATXN3-202ENST00000359366 PRAG1Q86YV5 1406 aa7.08□□□□□ -1.28
ATXN3-202ENST00000359366 TET3O43151 1660 aa7.07□□□□□ -1.28
ATXN3-202ENST00000359366 MYCNP04198 464 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-202ENST00000359366 PRDM15P57071 1507 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-202ENST00000359366 UHRF1BP1Q6BDS2 1440 aa7.07□□□□□ -1.28
ATXN3-202ENST00000359366 DIP2CQ9Y2E4 1556 aa7.07□□□□□ -1.28
ATXN3-202ENST00000359366 VWDEQ8N2E2 1590 aa7.07□□□□□ -1.28
ATXN3-202ENST00000359366 RALGAPBQ86X10 1494 aa7.07□□□□□ -1.28
ATXN3-202ENST00000359366 CD44P16070 742 aaKnown RBP7.07□□□□□ -1.28
ATXN3-202ENST00000359366 COL17A1Q9UMD9 1497 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-202ENST00000359366 EIF2AK4Q9P2K8 1649 aaKnown RBP7.06□□□□□ -1.28
ATXN3-202ENST00000359366 GLI2P10070 1586 aa7.06□□□□□ -1.28
ATXN3-202ENST00000359366 KIF13AQ9H1H9 1805 aa7.06□□□□□ -1.28
ATXN3-202ENST00000359366 CCDC184Q52MB2 194 aa7.06□□□□□ -1.28
ATXN3-202ENST00000359366 TRPM2O94759 1503 aa7.05□□□□□ -1.28
ATXN3-202ENST00000359366 EFCAB6Q5THR3 1501 aa7.05□□□□□ -1.28
ATXN3-202ENST00000359366 PTPRTO14522 1441 aa7.05□□□□□ -1.28
ATXN3-202ENST00000359366 NPATQ14207 1427 aa7.05□□□□□ -1.28
ATXN3-202ENST00000359366 TRPM1Q7Z4N2 1603 aa7.05□□□□□ -1.28
ATXN3-202ENST00000359366 ADGRF5Q8IZF2 1346 aa7.04□□□□□ -1.28
ATXN3-202ENST00000359366 FBXO31Q5XUX0 539 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-202ENST00000359366 SENP3-EIF4A1A0A087X0R7 540 aa7.04□□□□□ -1.28
ATXN3-202ENST00000359366 GTF3C3Q9Y5Q9 886 aa7.04□□□□□ -1.28
ATXN3-202ENST00000359366 RNF17Q9BXT8 1623 aaKnown RBP7.04□□□□□ -1.28
ATXN3-202ENST00000359366 CNTLNQ9NXG0 1405 aa7.04□□□□□ -1.28
ATXN3-202ENST00000359366 ABCC3O15438 1527 aa7.03□□□□□ -1.28
ATXN3-202ENST00000359366 MROH2AA6NES4 1674 aa7.03□□□□□ -1.28
ATXN3-202ENST00000359366 POTEB2H3BUK9 544 aa7.03□□□□□ -1.28
ATXN3-202ENST00000359366 CFAP70Q5T0N1 1121 aa7.03□□□□□ -1.28
ATXN3-202ENST00000359366 CHADLQ6NUI6 762 aa7.03□□□□□ -1.28
ATXN3-202ENST00000359366 SIGLEC1Q9BZZ2 1709 aa7.03□□□□□ -1.28
ATXN3-202ENST00000359366 SPDYE2BA6NHP3 402 aa7.03□□□□□ -1.28
ATXN3-202ENST00000359366 SPDYE6P0CI01 402 aa7.03□□□□□ -1.28
ATXN3-202ENST00000359366 SPDYE2Q495Y8 402 aa7.03□□□□□ -1.28
ATXN3-202ENST00000359366 ANP32EQ9BTT0 268 aa7.02□□□□□ -1.29
ATXN3-202ENST00000359366 CAMSAP1Q5T5Y3 1602 aa7.01□□□□□ -1.29
ATXN3-202ENST00000359366 MADDQ8WXG6 1647 aa7.01□□□□□ -1.29
ATXN3-202ENST00000359366 KIF1BO60333 1816 aa7.01□□□□□ -1.29
ATXN3-202ENST00000359366 DISP3Q9P2K9 1392 aa7.01□□□□□ -1.29
ATXN3-202ENST00000359366 NOS1P29475 1434 aa7.01□□□□□ -1.29
ATXN3-202ENST00000359366 IDI1Q13907 227 aa7.01□□□□□ -1.29
ATXN3-202ENST00000359366 TMEM132EQ6IEE7 984 aa7.01□□□□□ -1.29
ATXN3-202ENST00000359366 TESK2Q96S53 571 aa7□□□□□ -1.29
ATXN3-202ENST00000359366 PRKRIP1Q9H875 184 aaPredicted RBP7□□□□□ -1.29
ATXN3-202ENST00000359366 POLR1AO95602 1720 aaPredicted RBP7□□□□□ -1.29
ATXN3-202ENST00000359366 LMTK2Q8IWU2 1503 aa7□□□□□ -1.29
ATXN3-202ENST00000359366 ARID4BQ4LE39 1312 aaPredicted RBP7□□□□□ -1.29
ATXN3-202ENST00000359366 SYNMO15061 1565 aa6.99□□□□□ -1.29
ATXN3-202ENST00000359366 FAM9BQ8IZU0 186 aa6.99□□□□□ -1.29
ATXN3-202ENST00000359366 GPRASP1Q5JY77 1395 aa6.99□□□□□ -1.29
ATXN3-202ENST00000359366 FAM163AQ96GL9 167 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-202ENST00000359366 MYO5BQ9ULV0 1848 aa6.98□□□□□ -1.29
ATXN3-202ENST00000359366 ZMYM4Q5VZL5 1548 aa6.98□□□□□ -1.29
ATXN3-202ENST00000359366 CCER2I3L3R5 266 aa6.98□□□□□ -1.29
ATXN3-202ENST00000359366 MRS2Q9HD23 443 aa6.98□□□□□ -1.29
ATXN3-202ENST00000359366 TRAK1Q9UPV9 953 aa6.98□□□□□ -1.29
ATXN3-202ENST00000359366 SAFB2Q14151 953 aaKnown RBP eCLIP6.97□□□□□ -1.29
ATXN3-202ENST00000359366 CLTCQ00610 1675 aaKnown RBP6.97□□□□□ -1.29
ATXN3-202ENST00000359366 ADGRB3O60242 1522 aa6.97□□□□□ -1.29
ATXN3-202ENST00000359366 HNRNPUQ00839 825 aaKnown RBP eCLIP6.96□□□□□ -1.29
ATXN3-202ENST00000359366 CC2D1BQ5T0F9 858 aaKnown RBP6.96□□□□□ -1.29
ATXN3-202ENST00000359366 UBE2Q2Q8WVN8 375 aa6.96□□□□□ -1.29
ATXN3-202ENST00000359366 STK26Q9P289 416 aa6.96□□□□□ -1.29
ATXN3-202ENST00000359366 IFT172Q9UG01 1749 aa6.96□□□□□ -1.3
ATXN3-202ENST00000359366 CEBPAP49715 358 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-202ENST00000359366 PANK3Q9H999 370 aa6.96□□□□□ -1.3
ATXN3-202ENST00000359366 STAG3Q9UJ98 1225 aa6.96□□□□□ -1.3
ATXN3-202ENST00000359366 PREX1Q8TCU6 1659 aa6.95□□□□□ -1.3
ATXN3-202ENST00000359366 TMF1P82094 1093 aa6.95□□□□□ -1.3
ATXN3-202ENST00000359366 LCE2DQ5TA82 110 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-202ENST00000359366 MAMSTRQ6ZN01 415 aa6.95□□□□□ -1.3
ATXN3-202ENST00000359366 IQGAP1P46940 1657 aa6.95□□□□□ -1.3
ATXN3-202ENST00000359366 PPLO60437 1756 aa6.95□□□□□ -1.3
ATXN3-202ENST00000359366 SCAF11Q99590 1463 aaKnown RBP6.95□□□□□ -1.3
ATXN3-202ENST00000359366 ARHGEF40Q8TER5 1519 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 1212.3 ms