RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 PIK3C2BO00750 1634 aa19.9■□□□□ 0.78
NIPAL3-203ENST00000358028 UBR1Q8IWV7 1749 aa19.9■□□□□ 0.78
NIPAL3-203ENST00000358028 SPATA31E1Q6ZUB1 1445 aa19.87■□□□□ 0.77
NIPAL3-203ENST00000358028 UGGT1Q9NYU2 1555 aa19.87■□□□□ 0.77
NIPAL3-203ENST00000358028 PLA2R1Q13018 1463 aa19.87■□□□□ 0.77
NIPAL3-203ENST00000358028 MYO5BQ9ULV0 1848 aa19.86■□□□□ 0.77
NIPAL3-203ENST00000358028 CCDC7Q96M83 1385 aa19.86■□□□□ 0.77
NIPAL3-203ENST00000358028 CERKQ8TCT0 537 aa19.84■□□□□ 0.77
NIPAL3-203ENST00000358028 KDM5AP29375 1690 aaKnown RBP19.83■□□□□ 0.77
NIPAL3-203ENST00000358028 C11orf95C9JLR9 678 aaPredicted RBP19.81■□□□□ 0.76
NIPAL3-203ENST00000358028 ADGRB3O60242 1522 aa19.8■□□□□ 0.76
NIPAL3-203ENST00000358028 LTBP4Q8N2S1 1624 aa19.79■□□□□ 0.76
NIPAL3-203ENST00000358028 TRPM2O94759 1503 aa19.79■□□□□ 0.76
NIPAL3-203ENST00000358028 CLTCL1P53675 1640 aa19.78■□□□□ 0.76
NIPAL3-203ENST00000358028 IDI1Q13907 227 aa19.78■□□□□ 0.76
NIPAL3-203ENST00000358028 RALGAPBQ86X10 1494 aa19.78■□□□□ 0.76
NIPAL3-203ENST00000358028 TMEM131LA2VDJ0 1609 aa19.78■□□□□ 0.76
NIPAL3-203ENST00000358028 NCKAP5LQ9HCH0 1330 aa19.78■□□□□ 0.76
NIPAL3-203ENST00000358028 NEURL4Q96JN8 1562 aa19.76■□□□□ 0.75
NIPAL3-203ENST00000358028 KIF7Q2M1P5 1343 aa19.75■□□□□ 0.75
NIPAL3-203ENST00000358028 USP47Q96K76 1375 aa19.75■□□□□ 0.75
NIPAL3-203ENST00000358028 SLC52A1Q9NWF4 448 aa19.75■□□□□ 0.75
NIPAL3-203ENST00000358028 ZNF326Q5BKZ1 582 aaKnown RBP19.74■□□□□ 0.75
NIPAL3-203ENST00000358028 THEMISQ8N1K5 641 aaPredicted RBP19.74■□□□□ 0.75
NIPAL3-203ENST00000358028 KIF1BO60333 1816 aa19.74■□□□□ 0.75
NIPAL3-203ENST00000358028 SLIT1O75093 1534 aa19.73■□□□□ 0.75
NIPAL3-203ENST00000358028 ARHGAP23Q9P227 1491 aa19.72■□□□□ 0.75
NIPAL3-203ENST00000358028 STAG3Q9UJ98 1225 aa19.71■□□□□ 0.75
NIPAL3-203ENST00000358028 IQSEC2Q5JU85 1478 aa19.7■□□□□ 0.74
NIPAL3-203ENST00000358028 IQGAP1P46940 1657 aa19.69■□□□□ 0.74
NIPAL3-203ENST00000358028 CCDC144AA2RUR9 1427 aa19.69■□□□□ 0.74
NIPAL3-203ENST00000358028 TMEM2Q9UHN6 1383 aa19.68■□□□□ 0.74
NIPAL3-203ENST00000358028 SCAF11Q99590 1463 aaKnown RBP19.67■□□□□ 0.74
NIPAL3-203ENST00000358028 PRKRIP1Q9H875 184 aaPredicted RBP19.67■□□□□ 0.74
NIPAL3-203ENST00000358028 ZNF335Q9H4Z2 1342 aaPredicted RBP19.66■□□□□ 0.74
NIPAL3-203ENST00000358028 CHGAP10645 457 aaKnown RBP19.66■□□□□ 0.74
NIPAL3-203ENST00000358028 ANKLE2Q86XL3 938 aa19.66■□□□□ 0.74
NIPAL3-203ENST00000358028 MED14O60244 1454 aa19.66■□□□□ 0.74
NIPAL3-203ENST00000358028 NEFLP07196 543 aa19.65■□□□□ 0.74
NIPAL3-203ENST00000358028 DCAF11Q8TEB1 546 aa19.65■□□□□ 0.74
NIPAL3-203ENST00000358028 TRPM1Q7Z4N2 1603 aa19.64■□□□□ 0.73
NIPAL3-203ENST00000358028 ZFYVE9O95405 1425 aa19.64■□□□□ 0.73
NIPAL3-203ENST00000358028 LTKP29376 864 aa19.64■□□□□ 0.73
NIPAL3-203ENST00000358028 CARD11Q9BXL7 1154 aa19.64■□□□□ 0.73
NIPAL3-203ENST00000358028 KDM2AQ9Y2K7 1162 aa19.64■□□□□ 0.73
NIPAL3-203ENST00000358028 NPHP4O75161 1426 aaPredicted RBP19.63■□□□□ 0.73
NIPAL3-203ENST00000358028 RIMS2Q9UQ26 1411 aa19.62■□□□□ 0.73
NIPAL3-203ENST00000358028 TXNDC2Q86VQ3 553 aa19.61■□□□□ 0.73
NIPAL3-203ENST00000358028 PRAG1Q86YV5 1406 aa19.61■□□□□ 0.73
NIPAL3-203ENST00000358028 FKBP8Q14318 412 aa19.6■□□□□ 0.73
NIPAL3-203ENST00000358028 NEXMIFQ5QGS0 1516 aa19.6■□□□□ 0.73
NIPAL3-203ENST00000358028 MYT1Q01538 1121 aa19.6■□□□□ 0.73
NIPAL3-203ENST00000358028 PPLO60437 1756 aa19.59■□□□□ 0.73
NIPAL3-203ENST00000358028 HNRNPUQ00839 825 aaKnown RBP eCLIP19.59■□□□□ 0.73
NIPAL3-203ENST00000358028 CCDC184Q52MB2 194 aa19.59■□□□□ 0.73
NIPAL3-203ENST00000358028 EID1Q9Y6B2 187 aa19.59■□□□□ 0.73
NIPAL3-203ENST00000358028 ROCK2O75116 1388 aaKnown RBP19.58■□□□□ 0.73
NIPAL3-203ENST00000358028 LAMC1P11047 1609 aa19.58■□□□□ 0.72
NIPAL3-203ENST00000358028 IFT172Q9UG01 1749 aa19.58■□□□□ 0.72
NIPAL3-203ENST00000358028 NUTM2DQ5VT03 806 aaPredicted RBP19.56■□□□□ 0.72
NIPAL3-203ENST00000358028 STRCP1A6NGW2 1772 aa19.56■□□□□ 0.72
NIPAL3-203ENST00000358028 CPS1P31327 1500 aa19.55■□□□□ 0.72
NIPAL3-203ENST00000358028 POLR3GLQ9BT43 218 aa19.55■□□□□ 0.72
NIPAL3-203ENST00000358028 MRS2Q9HD23 443 aa19.55■□□□□ 0.72
NIPAL3-203ENST00000358028 SENP3Q9H4L4 574 aaPredicted RBP19.54■□□□□ 0.72
NIPAL3-203ENST00000358028 NRXN3Q9Y4C0 1643 aa19.53■□□□□ 0.72
NIPAL3-203ENST00000358028 ST20-MTHFSA0A0A6YYL1 179 aa19.52■□□□□ 0.72
NIPAL3-203ENST00000358028 RGL3Q3MIN7 710 aa19.52■□□□□ 0.72
NIPAL3-203ENST00000358028 GPRASP1Q5JY77 1395 aa19.52■□□□□ 0.72
NIPAL3-203ENST00000358028 PLEKHG1Q9ULL1 1385 aa19.52■□□□□ 0.72
NIPAL3-203ENST00000358028 TSHZ2Q9NRE2 1034 aa19.51■□□□□ 0.71
NIPAL3-203ENST00000358028 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.5■□□□□ 0.71
NIPAL3-203ENST00000358028 HDGFP51858 240 aaKnown RBP19.49■□□□□ 0.71
NIPAL3-203ENST00000358028 SETBP1Q9Y6X0 1596 aa19.49■□□□□ 0.71
NIPAL3-203ENST00000358028 FAM9BQ8IZU0 186 aa19.48■□□□□ 0.71
NIPAL3-203ENST00000358028 SLC26A8Q96RN1 970 aa19.47■□□□□ 0.71
NIPAL3-203ENST00000358028 DIP2AQ14689 1571 aa19.47■□□□□ 0.71
NIPAL3-203ENST00000358028 ADAMTS13Q76LX8 1427 aa19.47■□□□□ 0.71
NIPAL3-203ENST00000358028 CHD2O14647 1828 aaKnown RBP19.47■□□□□ 0.71
NIPAL3-203ENST00000358028 SETD1AO15047 1707 aaKnown RBP19.46■□□□□ 0.71
NIPAL3-203ENST00000358028 BCANQ96GW7 911 aa19.46■□□□□ 0.71
NIPAL3-203ENST00000358028 NBPF1Q3BBV0 1214 aa19.45■□□□□ 0.7
NIPAL3-203ENST00000358028 UBAP1LF5GYI3 381 aa19.44■□□□□ 0.7
NIPAL3-203ENST00000358028 ERICH6BQ5W0A0 696 aa19.44■□□□□ 0.7
NIPAL3-203ENST00000358028 RPGRIP1LQ68CZ1 1315 aa19.44■□□□□ 0.7
NIPAL3-203ENST00000358028 NWD1Q149M9 1564 aa19.43■□□□□ 0.7
NIPAL3-203ENST00000358028 ZBED9Q6R2W3 1325 aa19.42■□□□□ 0.7
NIPAL3-203ENST00000358028 XIRP1Q702N8 1843 aaKnown RBP19.42■□□□□ 0.7
NIPAL3-203ENST00000358028 LRRC7Q96NW7 1537 aa19.42■□□□□ 0.7
NIPAL3-203ENST00000358028 ALKQ9UM73 1620 aa19.41■□□□□ 0.7
NIPAL3-203ENST00000358028 KTN1Q86UP2 1357 aaKnown RBP19.4■□□□□ 0.7
NIPAL3-203ENST00000358028 VGFO15240 615 aaPredicted RBP19.39■□□□□ 0.7
NIPAL3-203ENST00000358028 ADGRF5Q8IZF2 1346 aa19.39■□□□□ 0.69
NIPAL3-203ENST00000358028 MYOM2P54296 1465 aa19.38■□□□□ 0.69
NIPAL3-203ENST00000358028 TBX22Q9Y458 520 aa19.38■□□□□ 0.69
NIPAL3-203ENST00000358028 XRN1Q8IZH2 1706 aaKnown RBP19.37■□□□□ 0.69
NIPAL3-203ENST00000358028 CNGB1Q14028 1251 aaPredicted RBP19.37■□□□□ 0.69
NIPAL3-203ENST00000358028 PIK3C2GO75747 1445 aa19.36■□□□□ 0.69
NIPAL3-203ENST00000358028 NRXN1Q9ULB1 1477 aa19.36■□□□□ 0.69
NIPAL3-203ENST00000358028 PTPRUQ92729 1446 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms