RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 LTKP29376 864 aa21.51■■□□□ 1.03
CCNE1-202ENST00000357943 L3MBTL2Q969R5 705 aa21.51■■□□□ 1.03
CCNE1-202ENST00000357943 NEXMIFQ5QGS0 1516 aa21.5■■□□□ 1.03
CCNE1-202ENST00000357943 RPGRIP1LQ68CZ1 1315 aa21.5■■□□□ 1.03
CCNE1-202ENST00000357943 TONSLQ96HA7 1378 aa21.49■■□□□ 1.03
CCNE1-202ENST00000357943 TXNDC2Q86VQ3 553 aa21.49■■□□□ 1.03
CCNE1-202ENST00000357943 DCAF11Q8TEB1 546 aa21.49■■□□□ 1.03
CCNE1-202ENST00000357943 EID1Q9Y6B2 187 aa21.47■■□□□ 1.03
CCNE1-202ENST00000357943 ANKLE2Q86XL3 938 aa21.47■■□□□ 1.03
CCNE1-202ENST00000357943 KDM2AQ9Y2K7 1162 aa21.47■■□□□ 1.03
CCNE1-202ENST00000357943 HDGFP51858 240 aaKnown RBP21.46■■□□□ 1.03
CCNE1-202ENST00000357943 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.46■■□□□ 1.03
CCNE1-202ENST00000357943 NCKAP5LQ9HCH0 1330 aa21.46■■□□□ 1.03
CCNE1-202ENST00000357943 SCAF11Q99590 1463 aaKnown RBP21.45■■□□□ 1.02
CCNE1-202ENST00000357943 PPP1R15AO75807 674 aaPredicted RBP21.45■■□□□ 1.02
CCNE1-202ENST00000357943 SENP3Q9H4L4 574 aaPredicted RBP21.45■■□□□ 1.02
CCNE1-202ENST00000357943 ADGRF5Q8IZF2 1346 aa21.44■■□□□ 1.02
CCNE1-202ENST00000357943 PPLO60437 1756 aa21.44■■□□□ 1.02
CCNE1-202ENST00000357943 VGFO15240 615 aaPredicted RBP21.44■■□□□ 1.02
CCNE1-202ENST00000357943 IFT172Q9UG01 1749 aa21.43■■□□□ 1.02
CCNE1-202ENST00000357943 TIMELESSQ9UNS1 1208 aa21.41■■□□□ 1.02
CCNE1-202ENST00000357943 MYOM2P54296 1465 aa21.4■■□□□ 1.02
CCNE1-202ENST00000357943 PLEKHG1Q9ULL1 1385 aa21.39■■□□□ 1.01
CCNE1-202ENST00000357943 STAC3Q96MF2 364 aa21.39■■□□□ 1.01
CCNE1-202ENST00000357943 STRCQ7RTU9 1775 aa21.38■■□□□ 1.01
CCNE1-202ENST00000357943 POLR1AO95602 1720 aaPredicted RBP21.38■■□□□ 1.01
CCNE1-202ENST00000357943 MED14O60244 1454 aa21.37■■□□□ 1.01
CCNE1-202ENST00000357943 NRXN1Q9ULB1 1477 aa21.37■■□□□ 1.01
CCNE1-202ENST00000357943 BCANQ96GW7 911 aa21.37■■□□□ 1.01
CCNE1-202ENST00000357943 NPHP4O75161 1426 aaPredicted RBP21.36■■□□□ 1.01
CCNE1-202ENST00000357943 PIK3C2GO75747 1445 aa21.36■■□□□ 1.01
CCNE1-202ENST00000357943 PRAG1Q86YV5 1406 aa21.35■■□□□ 1.01
CCNE1-202ENST00000357943 NBPF8Q3BBV2 869 aa21.33■■□□□ 1.01
CCNE1-202ENST00000357943 SLC26A8Q96RN1 970 aa21.33■■□□□ 1.01
CCNE1-202ENST00000357943 ADAMTS13Q76LX8 1427 aa21.33■■□□□ 1
CCNE1-202ENST00000357943 NRXN3Q9Y4C0 1643 aa21.33■■□□□ 1
CCNE1-202ENST00000357943 SETBP1Q9Y6X0 1596 aa21.32■■□□□ 1
CCNE1-202ENST00000357943 CFAP70Q5T0N1 1121 aa21.31■■□□□ 1
CCNE1-202ENST00000357943 IQGAP1P46940 1657 aa21.31■■□□□ 1
CCNE1-202ENST00000357943 C14orf93Q9H972 538 aaKnown RBP21.29■■□□□ 1
CCNE1-202ENST00000357943 ALKQ9UM73 1620 aa21.28■■□□□ 1
CCNE1-202ENST00000357943 TBX22Q9Y458 520 aa21.27■■□□□ 1
CCNE1-202ENST00000357943 DMRT2Q9Y5R5 561 aa21.26■□□□□ 0.99
CCNE1-202ENST00000357943 METP08581 1390 aa21.25■□□□□ 0.99
CCNE1-202ENST00000357943 NBPF1Q3BBV0 1214 aa21.25■□□□□ 0.99
CCNE1-202ENST00000357943 TMEM132EQ6IEE7 984 aa21.25■□□□□ 0.99
CCNE1-202ENST00000357943 SETD1AO15047 1707 aaKnown RBP21.24■□□□□ 0.99
CCNE1-202ENST00000357943 DIP2AQ14689 1571 aa21.23■□□□□ 0.99
CCNE1-202ENST00000357943 ASXL1Q8IXJ9 1541 aa21.21■□□□□ 0.99
CCNE1-202ENST00000357943 TRPM1Q7Z4N2 1603 aa21.21■□□□□ 0.99
CCNE1-202ENST00000357943 LAMC1P11047 1609 aa21.21■□□□□ 0.99
CCNE1-202ENST00000357943 ADGRB1O14514 1584 aa21.2■□□□□ 0.98
CCNE1-202ENST00000357943 RALGAPBQ86X10 1494 aa21.19■□□□□ 0.98
CCNE1-202ENST00000357943 PTPRUQ92729 1446 aa21.19■□□□□ 0.98
CCNE1-202ENST00000357943 ROCK2O75116 1388 aaKnown RBP21.19■□□□□ 0.98
CCNE1-202ENST00000357943 KIAA1210Q9ULL0 1709 aa21.19■□□□□ 0.98
CCNE1-202ENST00000357943 ZEB1P37275 1124 aaPredicted RBP21.18■□□□□ 0.98
CCNE1-202ENST00000357943 PIK3R4Q99570 1358 aa21.18■□□□□ 0.98
CCNE1-202ENST00000357943 STK26Q9P289 416 aa21.16■□□□□ 0.98
CCNE1-202ENST00000357943 AMOTL2Q9Y2J4 779 aa21.16■□□□□ 0.98
CCNE1-202ENST00000357943 ZNF335Q9H4Z2 1342 aaPredicted RBP21.16■□□□□ 0.98
CCNE1-202ENST00000357943 YTHDC2Q9H6S0 1430 aaKnown RBP21.15■□□□□ 0.98
CCNE1-202ENST00000357943 GPRASP1Q5JY77 1395 aa21.15■□□□□ 0.98
CCNE1-202ENST00000357943 CARD11Q9BXL7 1154 aa21.15■□□□□ 0.98
CCNE1-202ENST00000357943 KCNA6P17658 529 aa21.14■□□□□ 0.97
CCNE1-202ENST00000357943 LRPPRCP42704 1394 aaKnown RBP21.14■□□□□ 0.97
CCNE1-202ENST00000357943 TRAK1Q9UPV9 953 aa21.13■□□□□ 0.97
CCNE1-202ENST00000357943 CHD2O14647 1828 aaKnown RBP21.12■□□□□ 0.97
CCNE1-202ENST00000357943 ABCC11Q96J66 1382 aa21.11■□□□□ 0.97
CCNE1-202ENST00000357943 NWD1Q149M9 1564 aa21.09■□□□□ 0.97
CCNE1-202ENST00000357943 XRN1Q8IZH2 1706 aaKnown RBP21.09■□□□□ 0.97
CCNE1-202ENST00000357943 STRCP1A6NGW2 1772 aa21.09■□□□□ 0.97
CCNE1-202ENST00000357943 ROBO2Q9HCK4 1378 aa21.08■□□□□ 0.97
CCNE1-202ENST00000357943 TECPR2O15040 1411 aa21.08■□□□□ 0.97
CCNE1-202ENST00000357943 WAPLQ7Z5K2 1190 aa21.06■□□□□ 0.96
CCNE1-202ENST00000357943 RBM33Q96EV2 1170 aaKnown RBP21.06■□□□□ 0.96
CCNE1-202ENST00000357943 PTCH1Q13635 1447 aa21.05■□□□□ 0.96
CCNE1-202ENST00000357943 NKTRP30414 1462 aaKnown RBP21.05■□□□□ 0.96
CCNE1-202ENST00000357943 CPS1P31327 1500 aa21.04■□□□□ 0.96
CCNE1-202ENST00000357943 PRAM1Q96QH2 718 aa21.04■□□□□ 0.96
CCNE1-202ENST00000357943 PLEKHH1Q9ULM0 1364 aa21.04■□□□□ 0.96
CCNE1-202ENST00000357943 KNDC1Q76NI1 1749 aa21.04■□□□□ 0.96
CCNE1-202ENST00000357943 DLC1Q96QB1 1528 aa21.03■□□□□ 0.96
CCNE1-202ENST00000357943 PROSER2Q86WR7 435 aaPredicted RBP21.03■□□□□ 0.96
CCNE1-202ENST00000357943 SIRT1Q96EB6 747 aa21.03■□□□□ 0.96
CCNE1-202ENST00000357943 USP47Q96K76 1375 aa21.03■□□□□ 0.96
CCNE1-202ENST00000357943 LTBP4Q8N2S1 1624 aa21.02■□□□□ 0.96
CCNE1-202ENST00000357943 SAFB2Q14151 953 aaKnown RBP eCLIP21.02■□□□□ 0.96
CCNE1-202ENST00000357943 FAM135BQ49AJ0 1406 aa21.02■□□□□ 0.96
CCNE1-202ENST00000357943 POGKQ9P215 609 aa21.01■□□□□ 0.95
CCNE1-202ENST00000357943 ARHGEF28Q8N1W1 1705 aaKnown RBP21.01■□□□□ 0.95
CCNE1-202ENST00000357943 LRRC7Q96NW7 1537 aa21■□□□□ 0.95
CCNE1-202ENST00000357943 TMEM94Q12767 1356 aa21■□□□□ 0.95
CCNE1-202ENST00000357943 EIF3AQ14152 1382 aaKnown RBP21■□□□□ 0.95
CCNE1-202ENST00000357943 CENPJQ9HC77 1338 aaPredicted RBP20.98■□□□□ 0.95
CCNE1-202ENST00000357943 ST20-MTHFSA0A0A6YYL1 179 aa20.98■□□□□ 0.95
CCNE1-202ENST00000357943 EIF4G2P78344 907 aaKnown RBP eCLIP20.97■□□□□ 0.95
CCNE1-202ENST00000357943 HSPA5P11021 654 aaKnown RBP20.96■□□□□ 0.95
CCNE1-202ENST00000357943 HIRIP3Q9BW71 556 aaPredicted RBP20.95■□□□□ 0.94
CCNE1-202ENST00000357943 MINK1Q8N4C8 1332 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms