RNA–Protein interactions for RNA: ENST00000357246.3

MAP1LC3C-201, Transcript of microtubule associated protein 1 light chain 3 gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3C, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3C-201ENST00000357246 SLC4A1APQ9BWU0 796 aaKnown RBP12.67□□□□□ -0.38
MAP1LC3C-201ENST00000357246 SPHKAPQ2M3C7 1700 aa12.67□□□□□ -0.38
MAP1LC3C-201ENST00000357246 CPS1P31327 1500 aa12.67□□□□□ -0.38
MAP1LC3C-201ENST00000357246 ZFYVE9O95405 1425 aa12.66□□□□□ -0.38
MAP1LC3C-201ENST00000357246 SETD5Q9C0A6 1442 aa12.65□□□□□ -0.38
MAP1LC3C-201ENST00000357246 RIMS2Q9UQ26 1411 aa12.65□□□□□ -0.38
MAP1LC3C-201ENST00000357246 STRCP1A6NGW2 1772 aa12.64□□□□□ -0.39
MAP1LC3C-201ENST00000357246 MPHOSPH9Q99550 1183 aa12.64□□□□□ -0.39
MAP1LC3C-201ENST00000357246 KCNA6P17658 529 aa12.63□□□□□ -0.39
MAP1LC3C-201ENST00000357246 HRCP23327 699 aa12.63□□□□□ -0.39
MAP1LC3C-201ENST00000357246 SLC26A8Q96RN1 970 aa12.63□□□□□ -0.39
MAP1LC3C-201ENST00000357246 TBX22Q9Y458 520 aa12.63□□□□□ -0.39
MAP1LC3C-201ENST00000357246 PLEKHG1Q9ULL1 1385 aa12.63□□□□□ -0.39
MAP1LC3C-201ENST00000357246 PPP1R15AO75807 674 aaPredicted RBP12.62□□□□□ -0.39
MAP1LC3C-201ENST00000357246 TRPM2O94759 1503 aa12.62□□□□□ -0.39
MAP1LC3C-201ENST00000357246 KIF1BO60333 1816 aa12.61□□□□□ -0.39
MAP1LC3C-201ENST00000357246 UBAP1LF5GYI3 381 aa12.61□□□□□ -0.39
MAP1LC3C-201ENST00000357246 BCANQ96GW7 911 aa12.61□□□□□ -0.39
MAP1LC3C-201ENST00000357246 TOM1O60784 492 aa12.6□□□□□ -0.39
MAP1LC3C-201ENST00000357246 NUTM2DQ5VT03 806 aaPredicted RBP12.6□□□□□ -0.39
MAP1LC3C-201ENST00000357246 LRRC7Q96NW7 1537 aa12.6□□□□□ -0.39
MAP1LC3C-201ENST00000357246 CLTCL1P53675 1640 aa12.59□□□□□ -0.39
MAP1LC3C-201ENST00000357246 ZNF326Q5BKZ1 582 aaKnown RBP12.59□□□□□ -0.39
MAP1LC3C-201ENST00000357246 CHD2O14647 1828 aaKnown RBP12.58□□□□□ -0.4
MAP1LC3C-201ENST00000357246 FOXD1Q16676 465 aa12.58□□□□□ -0.4
MAP1LC3C-201ENST00000357246 RPGRIP1LQ68CZ1 1315 aa12.58□□□□□ -0.4
MAP1LC3C-201ENST00000357246 RAB3GAP2Q9H2M9 1393 aa12.57□□□□□ -0.4
MAP1LC3C-201ENST00000357246 AMER1Q5JTC6 1135 aaPredicted RBP12.57□□□□□ -0.4
MAP1LC3C-201ENST00000357246 PIK3R4Q99570 1358 aa12.56□□□□□ -0.4
MAP1LC3C-201ENST00000357246 ADAMTS13Q76LX8 1427 aa12.56□□□□□ -0.4
MAP1LC3C-201ENST00000357246 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
MAP1LC3C-201ENST00000357246 PROSER2Q86WR7 435 aaPredicted RBP12.56□□□□□ -0.4
MAP1LC3C-201ENST00000357246 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
MAP1LC3C-201ENST00000357246 XIRP1Q702N8 1843 aaKnown RBP12.55□□□□□ -0.4
MAP1LC3C-201ENST00000357246 SENP3Q9H4L4 574 aaPredicted RBP12.55□□□□□ -0.4
MAP1LC3C-201ENST00000357246 DIP2AQ14689 1571 aa12.54□□□□□ -0.4
MAP1LC3C-201ENST00000357246 NEXMIFQ5QGS0 1516 aa12.53□□□□□ -0.4
MAP1LC3C-201ENST00000357246 TMEM94Q12767 1356 aa12.53□□□□□ -0.4
MAP1LC3C-201ENST00000357246 CCDC144AA2RUR9 1427 aa12.53□□□□□ -0.4
MAP1LC3C-201ENST00000357246 NWD1Q149M9 1564 aa12.52□□□□□ -0.4
MAP1LC3C-201ENST00000357246 AMOTL2Q9Y2J4 779 aa12.52□□□□□ -0.41
MAP1LC3C-201ENST00000357246 NKTRP30414 1462 aaKnown RBP12.52□□□□□ -0.41
MAP1LC3C-201ENST00000357246 SETBP1Q9Y6X0 1596 aa12.52□□□□□ -0.41
MAP1LC3C-201ENST00000357246 NCOA3Q9Y6Q9 1424 aa12.51□□□□□ -0.41
MAP1LC3C-201ENST00000357246 ALKQ9UM73 1620 aa12.51□□□□□ -0.41
MAP1LC3C-201ENST00000357246 NRXN3Q9Y4C0 1643 aa12.51□□□□□ -0.41
MAP1LC3C-201ENST00000357246 PIP4K2BP78356 416 aa12.5□□□□□ -0.41
MAP1LC3C-201ENST00000357246 SPATA31E1Q6ZUB1 1445 aa12.5□□□□□ -0.41
MAP1LC3C-201ENST00000357246 PPLO60437 1756 aa12.49□□□□□ -0.41
MAP1LC3C-201ENST00000357246 RGL3Q3MIN7 710 aa12.49□□□□□ -0.41
MAP1LC3C-201ENST00000357246 RBM33Q96EV2 1170 aaKnown RBP12.49□□□□□ -0.41
MAP1LC3C-201ENST00000357246 PTPRUQ92729 1446 aa12.48□□□□□ -0.41
MAP1LC3C-201ENST00000357246 METP08581 1390 aa12.48□□□□□ -0.41
MAP1LC3C-201ENST00000357246 ANKRD30BQ9BXX2 1392 aa12.48□□□□□ -0.41
MAP1LC3C-201ENST00000357246 SCAF1Q9H7N4 1312 aaKnown RBP12.48□□□□□ -0.41
MAP1LC3C-201ENST00000357246 C19orf44Q9H6X5 657 aa12.47□□□□□ -0.41
MAP1LC3C-201ENST00000357246 MSH6P52701 1360 aa12.46□□□□□ -0.41
MAP1LC3C-201ENST00000357246 HSPA1LP34931 641 aa12.46□□□□□ -0.41
MAP1LC3C-201ENST00000357246 FAM135BQ49AJ0 1406 aa12.45□□□□□ -0.42
MAP1LC3C-201ENST00000357246 ADGRF5Q8IZF2 1346 aa12.45□□□□□ -0.42
MAP1LC3C-201ENST00000357246 SLAIN2Q9P270 581 aa12.45□□□□□ -0.42
MAP1LC3C-201ENST00000357246 IFT172Q9UG01 1749 aa12.44□□□□□ -0.42
MAP1LC3C-201ENST00000357246 SETD1AO15047 1707 aaKnown RBP12.43□□□□□ -0.42
MAP1LC3C-201ENST00000357246 XRN1Q8IZH2 1706 aaKnown RBP12.43□□□□□ -0.42
MAP1LC3C-201ENST00000357246 CADPS2Q86UW7 1296 aa12.43□□□□□ -0.42
MAP1LC3C-201ENST00000357246 STAC3Q96MF2 364 aa12.43□□□□□ -0.42
MAP1LC3C-201ENST00000357246 KCNA4P22459 653 aa12.42□□□□□ -0.42
MAP1LC3C-201ENST00000357246 C14orf37Q86TY3 774 aa12.42□□□□□ -0.42
MAP1LC3C-201ENST00000357246 ATF3P18847 181 aa12.41□□□□□ -0.42
MAP1LC3C-201ENST00000357246 C14orf93Q9H972 538 aaKnown RBP12.41□□□□□ -0.42
MAP1LC3C-201ENST00000357246 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.41□□□□□ -0.42
MAP1LC3C-201ENST00000357246 PRAG1Q86YV5 1406 aa12.39□□□□□ -0.43
MAP1LC3C-201ENST00000357246 PIK3C2GO75747 1445 aa12.38□□□□□ -0.43
MAP1LC3C-201ENST00000357246 SIRT1Q96EB6 747 aa12.38□□□□□ -0.43
MAP1LC3C-201ENST00000357246 NRXN1Q9ULB1 1477 aa12.38□□□□□ -0.43
MAP1LC3C-201ENST00000357246 DCCP43146 1447 aa12.37□□□□□ -0.43
MAP1LC3C-201ENST00000357246 PTCH1Q13635 1447 aa12.37□□□□□ -0.43
MAP1LC3C-201ENST00000357246 TRIM26Q12899 539 aaPredicted RBP12.37□□□□□ -0.43
MAP1LC3C-201ENST00000357246 DCAF11Q8TEB1 546 aa12.37□□□□□ -0.43
MAP1LC3C-201ENST00000357246 ABCC11Q96J66 1382 aa12.37□□□□□ -0.43
MAP1LC3C-201ENST00000357246 ROBO2Q9HCK4 1378 aa12.37□□□□□ -0.43
MAP1LC3C-201ENST00000357246 MYOM2P54296 1465 aa12.37□□□□□ -0.43
MAP1LC3C-201ENST00000357246 ROBO1Q9Y6N7 1651 aa12.37□□□□□ -0.43
MAP1LC3C-201ENST00000357246 LRPPRCP42704 1394 aaKnown RBP12.36□□□□□ -0.43
MAP1LC3C-201ENST00000357246 CFAP70Q5T0N1 1121 aa12.36□□□□□ -0.43
MAP1LC3C-201ENST00000357246 TMEM132EQ6IEE7 984 aa12.36□□□□□ -0.43
MAP1LC3C-201ENST00000357246 ADGRL3Q9HAR2 1447 aa12.36□□□□□ -0.43
MAP1LC3C-201ENST00000357246 KDM2AQ9Y2K7 1162 aa12.35□□□□□ -0.43
MAP1LC3C-201ENST00000357246 DHX57Q6P158 1386 aaKnown RBP12.34□□□□□ -0.43
MAP1LC3C-201ENST00000357246 STK26Q9P289 416 aa12.34□□□□□ -0.43
MAP1LC3C-201ENST00000357246 TECPR2O15040 1411 aa12.34□□□□□ -0.43
MAP1LC3C-201ENST00000357246 YTHDC2Q9H6S0 1430 aaKnown RBP12.33□□□□□ -0.44
MAP1LC3C-201ENST00000357246 MST1RQ04912 1400 aa12.32□□□□□ -0.44
MAP1LC3C-201ENST00000357246 BRINP3Q76B58 766 aa12.32□□□□□ -0.44
MAP1LC3C-201ENST00000357246 WAPLQ7Z5K2 1190 aa12.32□□□□□ -0.44
MAP1LC3C-201ENST00000357246 LAMC1P11047 1609 aa12.32□□□□□ -0.44
MAP1LC3C-201ENST00000357246 NALCNQ8IZF0 1738 aa12.31□□□□□ -0.44
MAP1LC3C-201ENST00000357246 NCBP3Q53F19 620 aaKnown RBP12.31□□□□□ -0.44
MAP1LC3C-201ENST00000357246 ASXL1Q8IXJ9 1541 aa12.31□□□□□ -0.44
MAP1LC3C-201ENST00000357246 KNDC1Q76NI1 1749 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms