RNA–Protein interactions for RNA: ENST00000357089.8

UBXN11-202, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBXN11, Length 1,555 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-202ENST00000357089 RPGRIP1LQ68CZ1 1315 aa21.12■□□□□ 0.97
UBXN11-202ENST00000357089 NUTM2DQ5VT03 806 aaPredicted RBP21.11■□□□□ 0.97
UBXN11-202ENST00000357089 NEXMIFQ5QGS0 1516 aa21.11■□□□□ 0.97
UBXN11-202ENST00000357089 TMEM2Q9UHN6 1383 aa21.11■□□□□ 0.97
UBXN11-202ENST00000357089 RIMS2Q9UQ26 1411 aa21.1■□□□□ 0.97
UBXN11-202ENST00000357089 ZEB1P37275 1124 aaPredicted RBP21.08■□□□□ 0.97
UBXN11-202ENST00000357089 HSPA2P54652 639 aa21.08■□□□□ 0.97
UBXN11-202ENST00000357089 IFT172Q9UG01 1749 aa21.08■□□□□ 0.97
UBXN11-202ENST00000357089 PPLO60437 1756 aa21.08■□□□□ 0.96
UBXN11-202ENST00000357089 ZFYVE9O95405 1425 aa21.08■□□□□ 0.96
UBXN11-202ENST00000357089 SLIT1O75093 1534 aa21.07■□□□□ 0.96
UBXN11-202ENST00000357089 VGFO15240 615 aaPredicted RBP21.06■□□□□ 0.96
UBXN11-202ENST00000357089 HDGFP51858 240 aaKnown RBP21.06■□□□□ 0.96
UBXN11-202ENST00000357089 ARHGAP23Q9P227 1491 aa21.06■□□□□ 0.96
UBXN11-202ENST00000357089 PPP1R15AO75807 674 aaPredicted RBP21.06■□□□□ 0.96
UBXN11-202ENST00000357089 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.06■□□□□ 0.96
UBXN11-202ENST00000357089 ADGRF5Q8IZF2 1346 aa21.05■□□□□ 0.96
UBXN11-202ENST00000357089 TXNDC2Q86VQ3 553 aa21.05■□□□□ 0.96
UBXN11-202ENST00000357089 STAC3Q96MF2 364 aa21.05■□□□□ 0.96
UBXN11-202ENST00000357089 EID1Q9Y6B2 187 aa21.05■□□□□ 0.96
UBXN11-202ENST00000357089 MYOM2P54296 1465 aa21.04■□□□□ 0.96
UBXN11-202ENST00000357089 LTKP29376 864 aa21.04■□□□□ 0.96
UBXN11-202ENST00000357089 SENP3Q9H4L4 574 aaPredicted RBP21.03■□□□□ 0.96
UBXN11-202ENST00000357089 ANKLE2Q86XL3 938 aa21.02■□□□□ 0.95
UBXN11-202ENST00000357089 CERKQ8TCT0 537 aa21.01■□□□□ 0.95
UBXN11-202ENST00000357089 PRAG1Q86YV5 1406 aa21.01■□□□□ 0.95
UBXN11-202ENST00000357089 SCAF11Q99590 1463 aaKnown RBP21■□□□□ 0.95
UBXN11-202ENST00000357089 NBPF8Q3BBV2 869 aa21■□□□□ 0.95
UBXN11-202ENST00000357089 NRXN1Q9ULB1 1477 aa20.99■□□□□ 0.95
UBXN11-202ENST00000357089 PIK3C2GO75747 1445 aa20.98■□□□□ 0.95
UBXN11-202ENST00000357089 BCANQ96GW7 911 aa20.97■□□□□ 0.95
UBXN11-202ENST00000357089 NCKAP5LQ9HCH0 1330 aa20.97■□□□□ 0.95
UBXN11-202ENST00000357089 PLEKHG1Q9ULL1 1385 aa20.96■□□□□ 0.95
UBXN11-202ENST00000357089 POLR1AO95602 1720 aaPredicted RBP20.94■□□□□ 0.94
UBXN11-202ENST00000357089 CFAP70Q5T0N1 1121 aa20.93■□□□□ 0.94
UBXN11-202ENST00000357089 SETBP1Q9Y6X0 1596 aa20.91■□□□□ 0.94
UBXN11-202ENST00000357089 C14orf93Q9H972 538 aaKnown RBP20.91■□□□□ 0.94
UBXN11-202ENST00000357089 IQGAP1P46940 1657 aa20.91■□□□□ 0.94
UBXN11-202ENST00000357089 NPHP4O75161 1426 aaPredicted RBP20.9■□□□□ 0.94
UBXN11-202ENST00000357089 TRPM1Q7Z4N2 1603 aa20.9■□□□□ 0.94
UBXN11-202ENST00000357089 NRXN3Q9Y4C0 1643 aa20.9■□□□□ 0.94
UBXN11-202ENST00000357089 MED14O60244 1454 aa20.89■□□□□ 0.94
UBXN11-202ENST00000357089 NBPF1Q3BBV0 1214 aa20.89■□□□□ 0.94
UBXN11-202ENST00000357089 SLC26A8Q96RN1 970 aa20.89■□□□□ 0.94
UBXN11-202ENST00000357089 ALKQ9UM73 1620 aa20.89■□□□□ 0.93
UBXN11-202ENST00000357089 ILDR2Q71H61 639 aa20.89■□□□□ 0.93
UBXN11-202ENST00000357089 ROCK2O75116 1388 aaKnown RBP20.88■□□□□ 0.93
UBXN11-202ENST00000357089 ADAMTS13Q76LX8 1427 aa20.88■□□□□ 0.93
UBXN11-202ENST00000357089 RALGAPBQ86X10 1494 aa20.88■□□□□ 0.93
UBXN11-202ENST00000357089 DISP3Q9P2K9 1392 aa20.88■□□□□ 0.93
UBXN11-202ENST00000357089 LAMC1P11047 1609 aa20.87■□□□□ 0.93
UBXN11-202ENST00000357089 STRCQ7RTU9 1775 aa20.87■□□□□ 0.93
UBXN11-202ENST00000357089 KIAA1210Q9ULL0 1709 aa20.86■□□□□ 0.93
UBXN11-202ENST00000357089 TMEM132EQ6IEE7 984 aa20.86■□□□□ 0.93
UBXN11-202ENST00000357089 CARD11Q9BXL7 1154 aa20.84■□□□□ 0.93
UBXN11-202ENST00000357089 TBX22Q9Y458 520 aa20.84■□□□□ 0.93
UBXN11-202ENST00000357089 SETD1AO15047 1707 aaKnown RBP20.83■□□□□ 0.93
UBXN11-202ENST00000357089 DIP2AQ14689 1571 aa20.83■□□□□ 0.93
UBXN11-202ENST00000357089 METP08581 1390 aa20.83■□□□□ 0.93
UBXN11-202ENST00000357089 SOCS7O14512 581 aa20.83■□□□□ 0.92
UBXN11-202ENST00000357089 ADGRB1O14514 1584 aa20.81■□□□□ 0.92
UBXN11-202ENST00000357089 ASXL1Q8IXJ9 1541 aa20.81■□□□□ 0.92
UBXN11-202ENST00000357089 GPRASP1Q5JY77 1395 aa20.81■□□□□ 0.92
UBXN11-202ENST00000357089 STK26Q9P289 416 aa20.78■□□□□ 0.92
UBXN11-202ENST00000357089 YTHDC2Q9H6S0 1430 aaKnown RBP20.77■□□□□ 0.91
UBXN11-202ENST00000357089 TRAK1Q9UPV9 953 aa20.76■□□□□ 0.91
UBXN11-202ENST00000357089 DMRT2Q9Y5R5 561 aa20.76■□□□□ 0.91
UBXN11-202ENST00000357089 PIK3R4Q99570 1358 aa20.75■□□□□ 0.91
UBXN11-202ENST00000357089 PTPRUQ92729 1446 aa20.74■□□□□ 0.91
UBXN11-202ENST00000357089 LRPPRCP42704 1394 aaKnown RBP20.74■□□□□ 0.91
UBXN11-202ENST00000357089 AMOTL2Q9Y2J4 779 aa20.73■□□□□ 0.91
UBXN11-202ENST00000357089 USP47Q96K76 1375 aa20.73■□□□□ 0.91
UBXN11-202ENST00000357089 EIF4G2P78344 907 aaKnown RBP eCLIP20.72■□□□□ 0.91
UBXN11-202ENST00000357089 ABCC11Q96J66 1382 aa20.71■□□□□ 0.91
UBXN11-202ENST00000357089 KCNA6P17658 529 aa20.69■□□□□ 0.9
UBXN11-202ENST00000357089 CHD2O14647 1828 aaKnown RBP20.69■□□□□ 0.9
UBXN11-202ENST00000357089 EIF3AQ14152 1382 aaKnown RBP20.69■□□□□ 0.9
UBXN11-202ENST00000357089 HSPA5P11021 654 aaKnown RBP20.68■□□□□ 0.9
UBXN11-202ENST00000357089 HIRIP3Q9BW71 556 aaPredicted RBP20.68■□□□□ 0.9
UBXN11-202ENST00000357089 XRN1Q8IZH2 1706 aaKnown RBP20.67■□□□□ 0.9
UBXN11-202ENST00000357089 TECPR2O15040 1411 aa20.67■□□□□ 0.9
UBXN11-202ENST00000357089 ST20-MTHFSA0A0A6YYL1 179 aa20.67■□□□□ 0.9
UBXN11-202ENST00000357089 PRAM1Q96QH2 718 aa20.67■□□□□ 0.9
UBXN11-202ENST00000357089 KNDC1Q76NI1 1749 aa20.67■□□□□ 0.9
UBXN11-202ENST00000357089 ARHGEF28Q8N1W1 1705 aaKnown RBP20.67■□□□□ 0.9
UBXN11-202ENST00000357089 POGKQ9P215 609 aa20.66■□□□□ 0.9
UBXN11-202ENST00000357089 ROBO2Q9HCK4 1378 aa20.66■□□□□ 0.9
UBXN11-202ENST00000357089 CPS1P31327 1500 aa20.66■□□□□ 0.9
UBXN11-202ENST00000357089 DLC1Q96QB1 1528 aa20.66■□□□□ 0.9
UBXN11-202ENST00000357089 WAPLQ7Z5K2 1190 aa20.65■□□□□ 0.9
UBXN11-202ENST00000357089 ZNF335Q9H4Z2 1342 aaPredicted RBP20.65■□□□□ 0.9
UBXN11-202ENST00000357089 NWD1Q149M9 1564 aa20.65■□□□□ 0.9
UBXN11-202ENST00000357089 SAFB2Q14151 953 aaKnown RBP eCLIP20.64■□□□□ 0.9
UBXN11-202ENST00000357089 CENPJQ9HC77 1338 aaPredicted RBP20.64■□□□□ 0.9
UBXN11-202ENST00000357089 LTBP4Q8N2S1 1624 aa20.64■□□□□ 0.89
UBXN11-202ENST00000357089 PTCH1Q13635 1447 aa20.64■□□□□ 0.89
UBXN11-202ENST00000357089 FAM135BQ49AJ0 1406 aa20.63■□□□□ 0.89
UBXN11-202ENST00000357089 PLEKHH1Q9ULM0 1364 aa20.63■□□□□ 0.89
UBXN11-202ENST00000357089 SIRT1Q96EB6 747 aa20.63■□□□□ 0.89
UBXN11-202ENST00000357089 STRCP1A6NGW2 1772 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms