RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 PDCL2Q8N4E4 241 aa8.15□□□□□ -1.1
TRIM38-201ENST00000357085 NKTRP30414 1462 aaKnown RBP8.15□□□□□ -1.1
TRIM38-201ENST00000357085 MBD3O95983 291 aa8.15□□□□□ -1.1
TRIM38-201ENST00000357085 AMER1Q5JTC6 1135 aaPredicted RBP8.15□□□□□ -1.1
TRIM38-201ENST00000357085 UHRF1BP1Q6BDS2 1440 aa8.15□□□□□ -1.1
TRIM38-201ENST00000357085 CHMP4AQ9BY43 222 aa8.15□□□□□ -1.1
TRIM38-201ENST00000357085 NUCB2P80303 420 aa8.15□□□□□ -1.11
TRIM38-201ENST00000357085 ZNF771Q7L3S4 317 aaPredicted RBP8.15□□□□□ -1.11
TRIM38-201ENST00000357085 DAPK1P53355 1430 aa8.14□□□□□ -1.11
TRIM38-201ENST00000357085 TRAK2O60296 914 aa8.14□□□□□ -1.11
TRIM38-201ENST00000357085 TNNT3P45378 269 aaPredicted RBP8.14□□□□□ -1.11
TRIM38-201ENST00000357085 ST18O60284 1047 aa8.14□□□□□ -1.11
TRIM38-201ENST00000357085 BLMP54132 1417 aaPredicted RBP8.14□□□□□ -1.11
TRIM38-201ENST00000357085 ZSCAN30Q86W11 494 aa8.14□□□□□ -1.11
TRIM38-201ENST00000357085 LETM1O95202 739 aaPredicted RBP8.14□□□□□ -1.11
TRIM38-201ENST00000357085 PLXNC1O60486 1568 aa8.14□□□□□ -1.11
TRIM38-201ENST00000357085 FANCD2Q9BXW9 1451 aa8.14□□□□□ -1.11
TRIM38-201ENST00000357085 EPRSP07814 1512 aaKnown RBP8.14□□□□□ -1.11
TRIM38-201ENST00000357085 PLEKHH1Q9ULM0 1364 aa8.13□□□□□ -1.11
TRIM38-201ENST00000357085 CHMP4CQ96CF2 233 aa8.13□□□□□ -1.11
TRIM38-201ENST00000357085 R3HCC1Q9Y3T6 440 aaKnown RBP8.13□□□□□ -1.11
TRIM38-201ENST00000357085 UQCRHLA0A096LP55 91 aa8.13□□□□□ -1.11
TRIM38-201ENST00000357085 UQCRHP07919 91 aa8.13□□□□□ -1.11
TRIM38-201ENST00000357085 GAPVD1Q14C86 1478 aa8.13□□□□□ -1.11
TRIM38-201ENST00000357085 DYNC1I1O14576 645 aa8.13□□□□□ -1.11
TRIM38-201ENST00000357085 SMAP1Q8IYB5 467 aaPredicted RBP8.12□□□□□ -1.11
TRIM38-201ENST00000357085 DIAPH3Q9NSV4 1193 aa8.12□□□□□ -1.11
TRIM38-201ENST00000357085 ANKRD30BQ9BXX2 1392 aa8.12□□□□□ -1.11
TRIM38-201ENST00000357085 CALRP27797 417 aaKnown RBP8.12□□□□□ -1.11
TRIM38-201ENST00000357085 LAMC3Q9Y6N6 1575 aa8.12□□□□□ -1.11
TRIM38-201ENST00000357085 CROCC2H7BZ55 1655 aa8.12□□□□□ -1.11
TRIM38-201ENST00000357085 FAM193AP78312 1265 aa8.12□□□□□ -1.11
TRIM38-201ENST00000357085 PLIN1O60240 522 aa8.12□□□□□ -1.11
TRIM38-201ENST00000357085 PABPN1Q86U42 306 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRIM38-201ENST00000357085 CREBRFQ8IUR6 639 aa8.12□□□□□ -1.11
TRIM38-201ENST00000357085 PNISRQ8TF01 805 aaKnown RBP8.12□□□□□ -1.11
TRIM38-201ENST00000357085 KDM5AP29375 1690 aaKnown RBP8.11□□□□□ -1.11
TRIM38-201ENST00000357085 RRAGDQ9NQL2 400 aaPredicted RBP8.11□□□□□ -1.11
TRIM38-201ENST00000357085 KDM5CP41229 1560 aa8.11□□□□□ -1.11
TRIM38-201ENST00000357085 ABCC2Q92887 1545 aa8.11□□□□□ -1.11
TRIM38-201ENST00000357085 GOLGA6L1Q8N7Z2 621 aa8.11□□□□□ -1.11
TRIM38-201ENST00000357085 LRPPRCP42704 1394 aaKnown RBP8.11□□□□□ -1.11
TRIM38-201ENST00000357085 NUP155O75694 1391 aa8.11□□□□□ -1.11
TRIM38-201ENST00000357085 REC8O95072 547 aa8.1□□□□□ -1.11
TRIM38-201ENST00000357085 DDX19BQ9UMR2 479 aa8.1□□□□□ -1.11
TRIM38-201ENST00000357085 MFAP1P55081 439 aaKnown RBP8.1□□□□□ -1.11
TRIM38-201ENST00000357085 ZRSR1Q15695 479 aaKnown RBP8.1□□□□□ -1.11
TRIM38-201ENST00000357085 BBXQ8WY36 941 aaPredicted RBP8.1□□□□□ -1.11
TRIM38-201ENST00000357085 KIF3AQ9Y496 699 aa8.1□□□□□ -1.11
TRIM38-201ENST00000357085 XRCC6P12956 609 aaKnown RBP eCLIP8.1□□□□□ -1.11
TRIM38-201ENST00000357085 GPS2Q13227 327 aa8.1□□□□□ -1.11
TRIM38-201ENST00000357085 CLASP1Q7Z460 1538 aa8.1□□□□□ -1.11
TRIM38-201ENST00000357085 GPRASP1Q5JY77 1395 aa8.1□□□□□ -1.11
TRIM38-201ENST00000357085 ANKRD50Q9ULJ7 1429 aa8.1□□□□□ -1.11
TRIM38-201ENST00000357085 ZNF428Q96B54 188 aa8.1□□□□□ -1.11
TRIM38-201ENST00000357085 PARD3Q8TEW0 1356 aa8.1□□□□□ -1.11
TRIM38-201ENST00000357085 IBTKQ9P2D0 1353 aaPredicted RBP8.1□□□□□ -1.11
TRIM38-201ENST00000357085 CWC15Q9P013 229 aaKnown RBP8.1□□□□□ -1.11
TRIM38-201ENST00000357085 MCM4P33991 863 aa8.1□□□□□ -1.11
TRIM38-201ENST00000357085 FGD1P98174 961 aa8.1□□□□□ -1.11
TRIM38-201ENST00000357085 NOM1Q5C9Z4 860 aaKnown RBP8.1□□□□□ -1.11
TRIM38-201ENST00000357085 CLUAP1Q96AJ1 413 aa8.09□□□□□ -1.11
TRIM38-201ENST00000357085 MCM2P49736 904 aa8.09□□□□□ -1.11
TRIM38-201ENST00000357085 TAF7LQ5H9L4 462 aa8.09□□□□□ -1.11
TRIM38-201ENST00000357085 DCAF11Q8TEB1 546 aa8.09□□□□□ -1.11
TRIM38-201ENST00000357085 PLEKHD1A6NEE1 506 aa8.09□□□□□ -1.11
TRIM38-201ENST00000357085 DDX49Q9Y6V7 483 aaKnown RBP8.09□□□□□ -1.11
TRIM38-201ENST00000357085 TEX35Q5T0J7 233 aa8.09□□□□□ -1.11
TRIM38-201ENST00000357085 RNF20Q5VTR2 975 aa8.09□□□□□ -1.12
TRIM38-201ENST00000357085 ZHX1Q9UKY1 873 aaPredicted RBP8.08□□□□□ -1.12
TRIM38-201ENST00000357085 SYNMO15061 1565 aa8.08□□□□□ -1.12
TRIM38-201ENST00000357085 ADGRL2O95490 1459 aa8.08□□□□□ -1.12
TRIM38-201ENST00000357085 KIF2AO00139 706 aaPredicted RBP8.08□□□□□ -1.12
TRIM38-201ENST00000357085 CCP110O43303 1012 aa8.08□□□□□ -1.12
TRIM38-201ENST00000357085 RABEP1Q15276 862 aa8.08□□□□□ -1.12
TRIM38-201ENST00000357085 PRIMPOLQ96LW4 560 aa8.08□□□□□ -1.12
TRIM38-201ENST00000357085 CWC22Q9HCG8 908 aaKnown RBP8.08□□□□□ -1.12
TRIM38-201ENST00000357085 CC2D1BQ5T0F9 858 aaKnown RBP8.08□□□□□ -1.12
TRIM38-201ENST00000357085 NPC1L1Q9UHC9 1359 aa8.07□□□□□ -1.12
TRIM38-201ENST00000357085 RAPGEF6Q8TEU7 1601 aa8.07□□□□□ -1.12
TRIM38-201ENST00000357085 TOPBP1Q92547 1522 aa8.07□□□□□ -1.12
TRIM38-201ENST00000357085 FAM135AQ9P2D6 1515 aa8.07□□□□□ -1.12
TRIM38-201ENST00000357085 CCDC184Q52MB2 194 aa8.07□□□□□ -1.12
TRIM38-201ENST00000357085 SASS6Q6UVJ0 657 aa8.07□□□□□ -1.12
TRIM38-201ENST00000357085 GTPBP4Q9BZE4 634 aaKnown RBP8.07□□□□□ -1.12
TRIM38-201ENST00000357085 ADCY10Q96PN6 1610 aa8.07□□□□□ -1.12
TRIM38-201ENST00000357085 PKD2Q13563 968 aa8.07□□□□□ -1.12
TRIM38-201ENST00000357085 YEATS2Q9ULM3 1422 aa8.07□□□□□ -1.12
TRIM38-201ENST00000357085 HMMRO75330 724 aa8.07□□□□□ -1.12
TRIM38-201ENST00000357085 LMOD3Q0VAK6 560 aa8.07□□□□□ -1.12
TRIM38-201ENST00000357085 CCDC94Q9BW85 323 aaPredicted RBP8.07□□□□□ -1.12
TRIM38-201ENST00000357085 WDR62O43379 1518 aa8.07□□□□□ -1.12
TRIM38-201ENST00000357085 CAVIN2O95810 425 aa8.06□□□□□ -1.12
TRIM38-201ENST00000357085 NSD2O96028 1365 aa8.06□□□□□ -1.12
TRIM38-201ENST00000357085 HDAC5Q9UQL6 1122 aa8.06□□□□□ -1.12
TRIM38-201ENST00000357085 TROQ12816 1431 aaPredicted RBP8.06□□□□□ -1.12
TRIM38-201ENST00000357085 PBRM1Q86U86 1689 aa8.06□□□□□ -1.12
TRIM38-201ENST00000357085 PIK3C2GO75747 1445 aa8.06□□□□□ -1.12
TRIM38-201ENST00000357085 KIF20AO95235 890 aa8.06□□□□□ -1.12
TRIM38-201ENST00000357085 ARHGEF11O15085 1522 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms