RNA–Protein interactions for RNA: ENST00000356708.11

ATP5C1-202, Transcript of ATP synthase subunit gamma, mitochondrial, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP5C1, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5C1-202ENST00000356708 RBM33Q96EV2 1170 aaKnown RBP33.41■■■□□ 2.94
ATP5C1-202ENST00000356708 ZFYVE9O95405 1425 aa33.37■■■□□ 2.93
ATP5C1-202ENST00000356708 PPP1R15AO75807 674 aaPredicted RBP33.37■■■□□ 2.93
ATP5C1-202ENST00000356708 MYO5BQ9ULV0 1848 aa33.37■■■□□ 2.93
ATP5C1-202ENST00000356708 RIMS2Q9UQ26 1411 aa33.36■■■□□ 2.93
ATP5C1-202ENST00000356708 GCC2Q8IWJ2 1684 aa33.36■■■□□ 2.93
ATP5C1-202ENST00000356708 ROCK1Q13464 1354 aa33.35■■■□□ 2.93
ATP5C1-202ENST00000356708 PLEKHG1Q9ULL1 1385 aa33.35■■■□□ 2.93
ATP5C1-202ENST00000356708 UNC13BO14795 1591 aa33.34■■■□□ 2.93
ATP5C1-202ENST00000356708 NKTRP30414 1462 aaKnown RBP33.34■■■□□ 2.93
ATP5C1-202ENST00000356708 CHGAP10645 457 aaKnown RBP33.34■■■□□ 2.93
ATP5C1-202ENST00000356708 NWD1Q149M9 1564 aa33.33■■■□□ 2.93
ATP5C1-202ENST00000356708 TMEM131LA2VDJ0 1609 aa33.32■■■□□ 2.92
ATP5C1-202ENST00000356708 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.3■■■□□ 2.92
ATP5C1-202ENST00000356708 MSH6P52701 1360 aa33.29■■■□□ 2.92
ATP5C1-202ENST00000356708 TBX22Q9Y458 520 aa33.28■■■□□ 2.92
ATP5C1-202ENST00000356708 E9PCH4 1651 aa33.27■■■□□ 2.92
ATP5C1-202ENST00000356708 ITGAEP38570 1179 aa33.27■■■□□ 2.92
ATP5C1-202ENST00000356708 ROBO1Q9Y6N7 1651 aa33.26■■■□□ 2.91
ATP5C1-202ENST00000356708 CHD2O14647 1828 aaKnown RBP33.25■■■□□ 2.91
ATP5C1-202ENST00000356708 NUP155O75694 1391 aa33.25■■■□□ 2.91
ATP5C1-202ENST00000356708 RGS17Q9UGC6 210 aaPredicted RBP33.25■■■□□ 2.91
ATP5C1-202ENST00000356708 SLAIN2Q9P270 581 aa33.24■■■□□ 2.91
ATP5C1-202ENST00000356708 IQGAP3Q86VI3 1631 aa33.24■■■□□ 2.91
ATP5C1-202ENST00000356708 NUTM2DQ5VT03 806 aaPredicted RBP33.23■■■□□ 2.91
ATP5C1-202ENST00000356708 PPARGC1BQ86YN6 1023 aaKnown RBP33.21■■■□□ 2.91
ATP5C1-202ENST00000356708 ADAMTS13Q76LX8 1427 aa33.17■■■□□ 2.9
ATP5C1-202ENST00000356708 NCOA3Q9Y6Q9 1424 aa33.15■■■□□ 2.9
ATP5C1-202ENST00000356708 C14orf37Q86TY3 774 aa33.13■■■□□ 2.89
ATP5C1-202ENST00000356708 PIK3R4Q99570 1358 aa33.12■■■□□ 2.89
ATP5C1-202ENST00000356708 DIP2AQ14689 1571 aa33.1■■■□□ 2.89
ATP5C1-202ENST00000356708 C19orf44Q9H6X5 657 aa33.07■■■□□ 2.88
ATP5C1-202ENST00000356708 PHLPP1O60346 1717 aa33.07■■■□□ 2.88
ATP5C1-202ENST00000356708 POTEAQ6S8J7 498 aa33.05■■■□□ 2.88
ATP5C1-202ENST00000356708 CADPS2Q86UW7 1296 aa33.05■■■□□ 2.88
ATP5C1-202ENST00000356708 AMOTL2Q9Y2J4 779 aa33.05■■■□□ 2.88
ATP5C1-202ENST00000356708 JCADQ9P266 1359 aa33.04■■■□□ 2.88
ATP5C1-202ENST00000356708 ATF3P18847 181 aa33.03■■■□□ 2.88
ATP5C1-202ENST00000356708 TRPM2O94759 1503 aa33.02■■■□□ 2.88
ATP5C1-202ENST00000356708 ZNF326Q5BKZ1 582 aaKnown RBP33■■■□□ 2.87
ATP5C1-202ENST00000356708 PTPRUQ92729 1446 aa33■■■□□ 2.87
ATP5C1-202ENST00000356708 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.99■■■□□ 2.87
ATP5C1-202ENST00000356708 SPHKAPQ2M3C7 1700 aa32.98■■■□□ 2.87
ATP5C1-202ENST00000356708 COL16A1Q07092 1604 aaPredicted RBP32.94■■■□□ 2.86
ATP5C1-202ENST00000356708 SETBP1Q9Y6X0 1596 aa32.91■■■□□ 2.86
ATP5C1-202ENST00000356708 NRXN3Q9Y4C0 1643 aa32.91■■■□□ 2.86
ATP5C1-202ENST00000356708 RRBP1Q9P2E9 1410 aaKnown RBP32.9■■■□□ 2.86
ATP5C1-202ENST00000356708 SPATA31A6Q5VVP1 1343 aa32.88■■■□□ 2.85
ATP5C1-202ENST00000356708 BRINP3Q76B58 766 aa32.87■■■□□ 2.85
ATP5C1-202ENST00000356708 AHDC1Q5TGY3 1603 aaPredicted RBP32.87■■■□□ 2.85
ATP5C1-202ENST00000356708 NAIPQ13075 1403 aa32.86■■■□□ 2.85
ATP5C1-202ENST00000356708 METP08581 1390 aa32.86■■■□□ 2.85
ATP5C1-202ENST00000356708 XRN1Q8IZH2 1706 aaKnown RBP32.85■■■□□ 2.85
ATP5C1-202ENST00000356708 DCCP43146 1447 aa32.85■■■□□ 2.85
ATP5C1-202ENST00000356708 CLTCL1P53675 1640 aa32.84■■■□□ 2.85
ATP5C1-202ENST00000356708 MEX3CQ5U5Q3 659 aaKnown RBP32.82■■■□□ 2.84
ATP5C1-202ENST00000356708 TRIM52Q96A61 297 aa32.8■■■□□ 2.84
ATP5C1-202ENST00000356708 NEXMIFQ5QGS0 1516 aa32.8■■■□□ 2.84
ATP5C1-202ENST00000356708 LRP6O75581 1613 aa32.8■■■□□ 2.84
ATP5C1-202ENST00000356708 KIF1BO60333 1816 aa32.78■■■□□ 2.84
ATP5C1-202ENST00000356708 SHPRHQ149N8 1683 aa32.76■■■□□ 2.84
ATP5C1-202ENST00000356708 MST1RQ04912 1400 aa32.76■■■□□ 2.83
ATP5C1-202ENST00000356708 ZNF772Q68DY9 489 aaPredicted RBP32.75■■■□□ 2.83
ATP5C1-202ENST00000356708 ASXL1Q8IXJ9 1541 aa32.73■■■□□ 2.83
ATP5C1-202ENST00000356708 VGFO15240 615 aaPredicted RBP32.73■■■□□ 2.83
ATP5C1-202ENST00000356708 HFM1A2PYH4 1435 aa32.71■■■□□ 2.83
ATP5C1-202ENST00000356708 ADGRL3Q9HAR2 1447 aa32.71■■■□□ 2.83
ATP5C1-202ENST00000356708 NUTM2BA6NNL0 878 aaPredicted RBP32.7■■■□□ 2.83
ATP5C1-202ENST00000356708 NUTM2EB1AL46 878 aaPredicted RBP32.7■■■□□ 2.83
ATP5C1-202ENST00000356708 NUTM2AQ8IVF1 878 aaPredicted RBP32.7■■■□□ 2.83
ATP5C1-202ENST00000356708 SLC4A1APQ9BWU0 796 aaKnown RBP32.7■■■□□ 2.83
ATP5C1-202ENST00000356708 LRRC59Q96AG4 307 aaKnown RBP32.68■■■□□ 2.82
ATP5C1-202ENST00000356708 SETD5Q9C0A6 1442 aa32.68■■■□□ 2.82
ATP5C1-202ENST00000356708 RPGRIP1LQ68CZ1 1315 aa32.67■■■□□ 2.82
ATP5C1-202ENST00000356708 SETD1AO15047 1707 aaKnown RBP32.65■■■□□ 2.82
ATP5C1-202ENST00000356708 NHSL1Q5SYE7 1610 aa32.63■■■□□ 2.81
ATP5C1-202ENST00000356708 DDX17Q92841 729 aaKnown RBP32.63■■■□□ 2.81
ATP5C1-202ENST00000356708 NALCNQ8IZF0 1738 aa32.63■■■□□ 2.81
ATP5C1-202ENST00000356708 PTCH1Q13635 1447 aa32.6■■■□□ 2.81
ATP5C1-202ENST00000356708 RXRBP28702 533 aa32.59■■■□□ 2.81
ATP5C1-202ENST00000356708 ROBO2Q9HCK4 1378 aa32.58■■■□□ 2.81
ATP5C1-202ENST00000356708 C1orf167Q5SNV9 1468 aa32.58■■■□□ 2.81
ATP5C1-202ENST00000356708 AFF2P51816 1311 aa32.55■■■□□ 2.8
ATP5C1-202ENST00000356708 FOXD1Q16676 465 aa32.55■■■□□ 2.8
ATP5C1-202ENST00000356708 PNPLA6Q8IY17 1366 aa32.54■■■□□ 2.8
ATP5C1-202ENST00000356708 PPLO60437 1756 aa32.53■■■□□ 2.8
ATP5C1-202ENST00000356708 ORAI2Q96SN7 254 aa32.52■■■□□ 2.8
ATP5C1-202ENST00000356708 PRAG1Q86YV5 1406 aa32.51■■■□□ 2.79
ATP5C1-202ENST00000356708 C8orf37Q96NL8 207 aa32.5■■■□□ 2.79
ATP5C1-202ENST00000356708 UPF1Q92900 1129 aaKnown RBP eCLIP32.49■■■□□ 2.79
ATP5C1-202ENST00000356708 SOS2Q07890 1332 aaPredicted RBP32.46■■■□□ 2.79
ATP5C1-202ENST00000356708 CCDC144AA2RUR9 1427 aa32.44■■■□□ 2.78
ATP5C1-202ENST00000356708 RGL3Q3MIN7 710 aa32.44■■■□□ 2.78
ATP5C1-202ENST00000356708 QTRT2Q9H974 415 aaKnown RBP32.44■■■□□ 2.78
ATP5C1-202ENST00000356708 ADGRF5Q8IZF2 1346 aa32.44■■■□□ 2.78
ATP5C1-202ENST00000356708 CDK12Q9NYV4 1490 aaPredicted RBP32.43■■■□□ 2.78
ATP5C1-202ENST00000356708 MPHOSPH9Q99550 1183 aa32.43■■■□□ 2.78
ATP5C1-202ENST00000356708 LAMC1P11047 1609 aa32.43■■■□□ 2.78
ATP5C1-202ENST00000356708 ADAMTS2O95450 1211 aa32.42■■■□□ 2.78
ATP5C1-202ENST00000356708 NGLY1Q96IV0 654 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms