RNA–Protein interactions for RNA: ENST00000354530.2

CTSL3P-201, Transcript of cathepsin L family member 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CTSL3P, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3P-201ENST00000354530 LTKP29376 864 aa11.32□□□□□ -0.6
CTSL3P-201ENST00000354530 HSPA1LP34931 641 aa11.32□□□□□ -0.6
CTSL3P-201ENST00000354530 TXNDC2Q86VQ3 553 aa11.32□□□□□ -0.6
CTSL3P-201ENST00000354530 ROBO1Q9Y6N7 1651 aa11.32□□□□□ -0.6
CTSL3P-201ENST00000354530 TMEM131LA2VDJ0 1609 aa11.31□□□□□ -0.6
CTSL3P-201ENST00000354530 PHF23Q9BUL5 403 aaPredicted RBP11.31□□□□□ -0.6
CTSL3P-201ENST00000354530 SPHKAPQ2M3C7 1700 aa11.31□□□□□ -0.6
CTSL3P-201ENST00000354530 IDI1Q13907 227 aa11.3□□□□□ -0.6
CTSL3P-201ENST00000354530 SLC52A1Q9NWF4 448 aa11.3□□□□□ -0.6
CTSL3P-201ENST00000354530 SETD1AO15047 1707 aaKnown RBP11.29□□□□□ -0.6
CTSL3P-201ENST00000354530 PHLPP1O60346 1717 aa11.29□□□□□ -0.6
CTSL3P-201ENST00000354530 KIF1BO60333 1816 aa11.28□□□□□ -0.6
CTSL3P-201ENST00000354530 HDGFP51858 240 aaKnown RBP11.28□□□□□ -0.6
CTSL3P-201ENST00000354530 CLTCL1P53675 1640 aa11.27□□□□□ -0.6
CTSL3P-201ENST00000354530 ZFYVE9O95405 1425 aa11.27□□□□□ -0.6
CTSL3P-201ENST00000354530 HFM1A2PYH4 1435 aa11.26□□□□□ -0.61
CTSL3P-201ENST00000354530 FAM135BQ49AJ0 1406 aa11.26□□□□□ -0.61
CTSL3P-201ENST00000354530 NUP155O75694 1391 aa11.25□□□□□ -0.61
CTSL3P-201ENST00000354530 MSH6P52701 1360 aa11.25□□□□□ -0.61
CTSL3P-201ENST00000354530 TRPM2O94759 1503 aa11.25□□□□□ -0.61
CTSL3P-201ENST00000354530 KCNA6P17658 529 aa11.24□□□□□ -0.61
CTSL3P-201ENST00000354530 SENP3Q9H4L4 574 aaPredicted RBP11.24□□□□□ -0.61
CTSL3P-201ENST00000354530 PLEKHG1Q9ULL1 1385 aa11.24□□□□□ -0.61
CTSL3P-201ENST00000354530 NRXN3Q9Y4C0 1643 aa11.24□□□□□ -0.61
CTSL3P-201ENST00000354530 TMEM94Q12767 1356 aa11.23□□□□□ -0.61
CTSL3P-201ENST00000354530 NCOA3Q9Y6Q9 1424 aa11.23□□□□□ -0.61
CTSL3P-201ENST00000354530 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.23□□□□□ -0.61
CTSL3P-201ENST00000354530 PPP1R15AO75807 674 aaPredicted RBP11.22□□□□□ -0.61
CTSL3P-201ENST00000354530 SHPRHQ149N8 1683 aa11.22□□□□□ -0.61
CTSL3P-201ENST00000354530 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.22□□□□□ -0.61
CTSL3P-201ENST00000354530 PIK3R4Q99570 1358 aa11.22□□□□□ -0.61
CTSL3P-201ENST00000354530 RIMS2Q9UQ26 1411 aa11.22□□□□□ -0.61
CTSL3P-201ENST00000354530 BCANQ96GW7 911 aa11.21□□□□□ -0.61
CTSL3P-201ENST00000354530 PROSER2Q86WR7 435 aaPredicted RBP11.2□□□□□ -0.62
CTSL3P-201ENST00000354530 XRN1Q8IZH2 1706 aaKnown RBP11.19□□□□□ -0.62
CTSL3P-201ENST00000354530 NUTM2DQ5VT03 806 aaPredicted RBP11.19□□□□□ -0.62
CTSL3P-201ENST00000354530 COL16A1Q07092 1604 aaPredicted RBP11.19□□□□□ -0.62
CTSL3P-201ENST00000354530 ADAMTS13Q76LX8 1427 aa11.18□□□□□ -0.62
CTSL3P-201ENST00000354530 AHDC1Q5TGY3 1603 aaPredicted RBP11.18□□□□□ -0.62
CTSL3P-201ENST00000354530 FOXD1Q16676 465 aa11.18□□□□□ -0.62
CTSL3P-201ENST00000354530 SLC26A8Q96RN1 970 aa11.18□□□□□ -0.62
CTSL3P-201ENST00000354530 SETBP1Q9Y6X0 1596 aa11.18□□□□□ -0.62
CTSL3P-201ENST00000354530 NEXMIFQ5QGS0 1516 aa11.18□□□□□ -0.62
CTSL3P-201ENST00000354530 RBM33Q96EV2 1170 aaKnown RBP11.16□□□□□ -0.62
CTSL3P-201ENST00000354530 TBX22Q9Y458 520 aa11.16□□□□□ -0.62
CTSL3P-201ENST00000354530 DCCP43146 1447 aa11.16□□□□□ -0.62
CTSL3P-201ENST00000354530 PTPRUQ92729 1446 aa11.16□□□□□ -0.62
CTSL3P-201ENST00000354530 NHSL1Q5SYE7 1610 aa11.16□□□□□ -0.62
CTSL3P-201ENST00000354530 JCADQ9P266 1359 aa11.15□□□□□ -0.63
CTSL3P-201ENST00000354530 PPLO60437 1756 aa11.13□□□□□ -0.63
CTSL3P-201ENST00000354530 NALCNQ8IZF0 1738 aa11.13□□□□□ -0.63
CTSL3P-201ENST00000354530 IFT172Q9UG01 1749 aa11.13□□□□□ -0.63
CTSL3P-201ENST00000354530 CHGAP10645 457 aaKnown RBP11.13□□□□□ -0.63
CTSL3P-201ENST00000354530 C14orf37Q86TY3 774 aa11.13□□□□□ -0.63
CTSL3P-201ENST00000354530 CADPS2Q86UW7 1296 aa11.13□□□□□ -0.63
CTSL3P-201ENST00000354530 SLAIN2Q9P270 581 aa11.12□□□□□ -0.63
CTSL3P-201ENST00000354530 ATF3P18847 181 aa11.11□□□□□ -0.63
CTSL3P-201ENST00000354530 RAB3GAP2Q9H2M9 1393 aa11.11□□□□□ -0.63
CTSL3P-201ENST00000354530 SPATA31A6Q5VVP1 1343 aa11.1□□□□□ -0.63
CTSL3P-201ENST00000354530 TRIM52Q96A61 297 aa11.1□□□□□ -0.63
CTSL3P-201ENST00000354530 SETD5Q9C0A6 1442 aa11.09□□□□□ -0.63
CTSL3P-201ENST00000354530 METP08581 1390 aa11.09□□□□□ -0.63
CTSL3P-201ENST00000354530 C19orf44Q9H6X5 657 aa11.09□□□□□ -0.63
CTSL3P-201ENST00000354530 LAMC1P11047 1609 aa11.09□□□□□ -0.63
CTSL3P-201ENST00000354530 ASXL1Q8IXJ9 1541 aa11.09□□□□□ -0.63
CTSL3P-201ENST00000354530 SPATA31E1Q6ZUB1 1445 aa11.09□□□□□ -0.63
CTSL3P-201ENST00000354530 SLC4A1APQ9BWU0 796 aaKnown RBP11.08□□□□□ -0.64
CTSL3P-201ENST00000354530 MARF1Q9Y4F3 1742 aaKnown RBP11.07□□□□□ -0.64
CTSL3P-201ENST00000354530 ZNF326Q5BKZ1 582 aaKnown RBP11.06□□□□□ -0.64
CTSL3P-201ENST00000354530 MPHOSPH9Q99550 1183 aa11.06□□□□□ -0.64
CTSL3P-201ENST00000354530 ADGRL3Q9HAR2 1447 aa11.06□□□□□ -0.64
CTSL3P-201ENST00000354530 KNDC1Q76NI1 1749 aa11.06□□□□□ -0.64
CTSL3P-201ENST00000354530 MEX3CQ5U5Q3 659 aaKnown RBP11.05□□□□□ -0.64
CTSL3P-201ENST00000354530 PTCH1Q13635 1447 aa11.04□□□□□ -0.64
CTSL3P-201ENST00000354530 ZNF772Q68DY9 489 aaPredicted RBP11.04□□□□□ -0.64
CTSL3P-201ENST00000354530 RGS17Q9UGC6 210 aaPredicted RBP11.04□□□□□ -0.64
CTSL3P-201ENST00000354530 AMOTL2Q9Y2J4 779 aa11.04□□□□□ -0.64
CTSL3P-201ENST00000354530 PRAG1Q86YV5 1406 aa11.03□□□□□ -0.64
CTSL3P-201ENST00000354530 LRP6O75581 1613 aa11.02□□□□□ -0.64
CTSL3P-201ENST00000354530 MST1RQ04912 1400 aa11.02□□□□□ -0.64
CTSL3P-201ENST00000354530 CDK12Q9NYV4 1490 aaPredicted RBP11.02□□□□□ -0.65
CTSL3P-201ENST00000354530 ADGRF5Q8IZF2 1346 aa11.02□□□□□ -0.65
CTSL3P-201ENST00000354530 CDC42BPGQ6DT37 1551 aa11.01□□□□□ -0.65
CTSL3P-201ENST00000354530 COL22A1Q8NFW1 1626 aaPredicted RBP11.01□□□□□ -0.65
CTSL3P-201ENST00000354530 POTEAQ6S8J7 498 aa11□□□□□ -0.65
CTSL3P-201ENST00000354530 KIF1AQ12756 1690 aa11□□□□□ -0.65
CTSL3P-201ENST00000354530 RPGRIP1LQ68CZ1 1315 aa11□□□□□ -0.65
CTSL3P-201ENST00000354530 ACIN1Q9UKV3 1341 aaKnown RBP11□□□□□ -0.65
CTSL3P-201ENST00000354530 ANKRD30BQ9BXX2 1392 aa11□□□□□ -0.65
CTSL3P-201ENST00000354530 CCDC144AA2RUR9 1427 aa11□□□□□ -0.65
CTSL3P-201ENST00000354530 VGFO15240 615 aaPredicted RBP10.99□□□□□ -0.65
CTSL3P-201ENST00000354530 BRINP3Q76B58 766 aa10.99□□□□□ -0.65
CTSL3P-201ENST00000354530 ROBO2Q9HCK4 1378 aa10.99□□□□□ -0.65
CTSL3P-201ENST00000354530 NRXN1Q9ULB1 1477 aa10.99□□□□□ -0.65
CTSL3P-201ENST00000354530 LRRC59Q96AG4 307 aaKnown RBP10.98□□□□□ -0.65
CTSL3P-201ENST00000354530 PIK3C2GO75747 1445 aa10.98□□□□□ -0.65
CTSL3P-201ENST00000354530 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.98□□□□□ -0.65
CTSL3P-201ENST00000354530 RGL3Q3MIN7 710 aa10.97□□□□□ -0.65
CTSL3P-201ENST00000354530 FMN2Q9NZ56 1722 aa10.96□□□□□ -0.65
CTSL3P-201ENST00000354530 C1orf167Q5SNV9 1468 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms