RNA–Protein interactions for RNA: ENST00000354323.2

HRCT1-201, Transcript of histidine rich carboxyl terminus 1, humanhuman

APPRIS P1 BASIC

Gene HRCT1, Length 950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HRCT1-201ENST00000354323 TMEM2Q9UHN6 1383 aa23.2■■□□□ 1.3
HRCT1-201ENST00000354323 THEMISQ8N1K5 641 aaPredicted RBP23.2■■□□□ 1.3
HRCT1-201ENST00000354323 DCAF11Q8TEB1 546 aa23.2■■□□□ 1.3
HRCT1-201ENST00000354323 RIMS2Q9UQ26 1411 aa23.19■■□□□ 1.3
HRCT1-201ENST00000354323 ARHGAP23Q9P227 1491 aa23.18■■□□□ 1.3
HRCT1-201ENST00000354323 ZFYVE9O95405 1425 aa23.18■■□□□ 1.3
HRCT1-201ENST00000354323 STAC3Q96MF2 364 aa23.17■■□□□ 1.3
HRCT1-201ENST00000354323 KDM2AQ9Y2K7 1162 aa23.16■■□□□ 1.3
HRCT1-201ENST00000354323 LMTK3Q96Q04 1460 aa23.16■■□□□ 1.3
HRCT1-201ENST00000354323 PPP1R15AO75807 674 aaPredicted RBP23.13■■□□□ 1.29
HRCT1-201ENST00000354323 HDGFP51858 240 aaKnown RBP23.13■■□□□ 1.29
HRCT1-201ENST00000354323 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.13■■□□□ 1.29
HRCT1-201ENST00000354323 NRXN1Q9ULB1 1477 aa23.12■■□□□ 1.29
HRCT1-201ENST00000354323 VGFO15240 615 aaPredicted RBP23.12■■□□□ 1.29
HRCT1-201ENST00000354323 PRAG1Q86YV5 1406 aa23.12■■□□□ 1.29
HRCT1-201ENST00000354323 POLR1AO95602 1720 aaPredicted RBP23.11■■□□□ 1.29
HRCT1-201ENST00000354323 NUTM2DQ5VT03 806 aaPredicted RBP23.11■■□□□ 1.29
HRCT1-201ENST00000354323 ADGRF5Q8IZF2 1346 aa23.1■■□□□ 1.29
HRCT1-201ENST00000354323 EID1Q9Y6B2 187 aa23.1■■□□□ 1.29
HRCT1-201ENST00000354323 SCAF11Q99590 1463 aaKnown RBP23.1■■□□□ 1.29
HRCT1-201ENST00000354323 PIK3C2GO75747 1445 aa23.08■■□□□ 1.29
HRCT1-201ENST00000354323 TXNDC2Q86VQ3 553 aa23.07■■□□□ 1.28
HRCT1-201ENST00000354323 KIAA1210Q9ULL0 1709 aa23.07■■□□□ 1.28
HRCT1-201ENST00000354323 LAMC1P11047 1609 aa23.07■■□□□ 1.28
HRCT1-201ENST00000354323 TRPM1Q7Z4N2 1603 aa23.07■■□□□ 1.28
HRCT1-201ENST00000354323 LTKP29376 864 aa23.06■■□□□ 1.28
HRCT1-201ENST00000354323 NBPF8Q3BBV2 869 aa23.05■■□□□ 1.28
HRCT1-201ENST00000354323 ANKLE2Q86XL3 938 aa23.05■■□□□ 1.28
HRCT1-201ENST00000354323 IQGAP1P46940 1657 aa23.05■■□□□ 1.28
HRCT1-201ENST00000354323 SETBP1Q9Y6X0 1596 aa23.05■■□□□ 1.28
HRCT1-201ENST00000354323 PLEKHG1Q9ULL1 1385 aa23.04■■□□□ 1.28
HRCT1-201ENST00000354323 NRXN3Q9Y4C0 1643 aa23.04■■□□□ 1.28
HRCT1-201ENST00000354323 HSPA2P54652 639 aa23.02■■□□□ 1.28
HRCT1-201ENST00000354323 RALGAPBQ86X10 1494 aa23.02■■□□□ 1.28
HRCT1-201ENST00000354323 ALKQ9UM73 1620 aa23■■□□□ 1.27
HRCT1-201ENST00000354323 SETD1AO15047 1707 aaKnown RBP22.99■■□□□ 1.27
HRCT1-201ENST00000354323 MED14O60244 1454 aa22.99■■□□□ 1.27
HRCT1-201ENST00000354323 DIP2AQ14689 1571 aa22.98■■□□□ 1.27
HRCT1-201ENST00000354323 STRCQ7RTU9 1775 aa22.98■■□□□ 1.27
HRCT1-201ENST00000354323 AEBP2Q6ZN18 517 aaPredicted RBP22.97■■□□□ 1.27
HRCT1-201ENST00000354323 SENP3Q9H4L4 574 aaPredicted RBP22.97■■□□□ 1.27
HRCT1-201ENST00000354323 C14orf93Q9H972 538 aaKnown RBP22.97■■□□□ 1.27
HRCT1-201ENST00000354323 NCKAP5LQ9HCH0 1330 aa22.97■■□□□ 1.27
HRCT1-201ENST00000354323 NPHP4O75161 1426 aaPredicted RBP22.97■■□□□ 1.27
HRCT1-201ENST00000354323 CFAP70Q5T0N1 1121 aa22.96■■□□□ 1.27
HRCT1-201ENST00000354323 BCANQ96GW7 911 aa22.96■■□□□ 1.27
HRCT1-201ENST00000354323 ADAMTS13Q76LX8 1427 aa22.96■■□□□ 1.27
HRCT1-201ENST00000354323 ROCK2O75116 1388 aaKnown RBP22.94■■□□□ 1.26
HRCT1-201ENST00000354323 ADGRB1O14514 1584 aa22.93■■□□□ 1.26
HRCT1-201ENST00000354323 ASXL1Q8IXJ9 1541 aa22.92■■□□□ 1.26
HRCT1-201ENST00000354323 GPRASP1Q5JY77 1395 aa22.92■■□□□ 1.26
HRCT1-201ENST00000354323 NBPF1Q3BBV0 1214 aa22.91■■□□□ 1.26
HRCT1-201ENST00000354323 SLC26A8Q96RN1 970 aa22.88■■□□□ 1.25
HRCT1-201ENST00000354323 TBX22Q9Y458 520 aa22.88■■□□□ 1.25
HRCT1-201ENST00000354323 CARD11Q9BXL7 1154 aa22.87■■□□□ 1.25
HRCT1-201ENST00000354323 METP08581 1390 aa22.86■■□□□ 1.25
HRCT1-201ENST00000354323 TMEM132EQ6IEE7 984 aa22.85■■□□□ 1.25
HRCT1-201ENST00000354323 KNDC1Q76NI1 1749 aa22.84■■□□□ 1.25
HRCT1-201ENST00000354323 PIK3R4Q99570 1358 aa22.84■■□□□ 1.25
HRCT1-201ENST00000354323 YTHDC2Q9H6S0 1430 aaKnown RBP22.83■■□□□ 1.25
HRCT1-201ENST00000354323 CHD2O14647 1828 aaKnown RBP22.82■■□□□ 1.24
HRCT1-201ENST00000354323 LRPPRCP42704 1394 aaKnown RBP22.81■■□□□ 1.24
HRCT1-201ENST00000354323 ARHGEF28Q8N1W1 1705 aaKnown RBP22.81■■□□□ 1.24
HRCT1-201ENST00000354323 XRN1Q8IZH2 1706 aaKnown RBP22.8■■□□□ 1.24
HRCT1-201ENST00000354323 USP47Q96K76 1375 aa22.79■■□□□ 1.24
HRCT1-201ENST00000354323 DMRT2Q9Y5R5 561 aa22.79■■□□□ 1.24
HRCT1-201ENST00000354323 PTPRUQ92729 1446 aa22.79■■□□□ 1.24
HRCT1-201ENST00000354323 CPS1P31327 1500 aa22.78■■□□□ 1.24
HRCT1-201ENST00000354323 NWD1Q149M9 1564 aa22.78■■□□□ 1.24
HRCT1-201ENST00000354323 DLC1Q96QB1 1528 aa22.77■■□□□ 1.24
HRCT1-201ENST00000354323 EIF3AQ14152 1382 aaKnown RBP22.77■■□□□ 1.24
HRCT1-201ENST00000354323 STK26Q9P289 416 aa22.77■■□□□ 1.24
HRCT1-201ENST00000354323 ABCC11Q96J66 1382 aa22.76■■□□□ 1.23
HRCT1-201ENST00000354323 TECPR2O15040 1411 aa22.76■■□□□ 1.23
HRCT1-201ENST00000354323 EIF4G2P78344 907 aaKnown RBP eCLIP22.76■■□□□ 1.23
HRCT1-201ENST00000354323 TRAK1Q9UPV9 953 aa22.75■■□□□ 1.23
HRCT1-201ENST00000354323 AMOTL2Q9Y2J4 779 aa22.73■■□□□ 1.23
HRCT1-201ENST00000354323 PTCH1Q13635 1447 aa22.73■■□□□ 1.23
HRCT1-201ENST00000354323 QRICH2Q9H0J4 1663 aa22.72■■□□□ 1.23
HRCT1-201ENST00000354323 HSPA5P11021 654 aaKnown RBP22.72■■□□□ 1.23
HRCT1-201ENST00000354323 STRCP1A6NGW2 1772 aa22.71■■□□□ 1.23
HRCT1-201ENST00000354323 KCNA6P17658 529 aa22.71■■□□□ 1.23
HRCT1-201ENST00000354323 FAM135BQ49AJ0 1406 aa22.7■■□□□ 1.22
HRCT1-201ENST00000354323 NKTRP30414 1462 aaKnown RBP22.69■■□□□ 1.22
HRCT1-201ENST00000354323 ROBO2Q9HCK4 1378 aa22.69■■□□□ 1.22
HRCT1-201ENST00000354323 SIRT1Q96EB6 747 aa22.69■■□□□ 1.22
HRCT1-201ENST00000354323 CENPJQ9HC77 1338 aaPredicted RBP22.68■■□□□ 1.22
HRCT1-201ENST00000354323 ST20-MTHFSA0A0A6YYL1 179 aa22.67■■□□□ 1.22
HRCT1-201ENST00000354323 PRAM1Q96QH2 718 aa22.67■■□□□ 1.22
HRCT1-201ENST00000354323 POGKQ9P215 609 aa22.66■■□□□ 1.22
HRCT1-201ENST00000354323 PLEKHH1Q9ULM0 1364 aa22.64■■□□□ 1.22
HRCT1-201ENST00000354323 HIRIP3Q9BW71 556 aaPredicted RBP22.64■■□□□ 1.21
HRCT1-201ENST00000354323 ZNF335Q9H4Z2 1342 aaPredicted RBP22.63■■□□□ 1.21
HRCT1-201ENST00000354323 WAPLQ7Z5K2 1190 aa22.63■■□□□ 1.21
HRCT1-201ENST00000354323 SBNO2Q9Y2G9 1366 aa22.63■■□□□ 1.21
HRCT1-201ENST00000354323 SAFB2Q14151 953 aaKnown RBP eCLIP22.61■■□□□ 1.21
HRCT1-201ENST00000354323 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.61■■□□□ 1.21
HRCT1-201ENST00000354323 TESK2Q96S53 571 aa22.6■■□□□ 1.21
HRCT1-201ENST00000354323 ADGRB2O60241 1585 aa22.59■■□□□ 1.21
HRCT1-201ENST00000354323 NALCNQ8IZF0 1738 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms