RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 GOLGA6L3A6NEY3 463 aa22.75■■□□□ 1.23
APP-202ENST00000348990 MAGI1Q96QZ7 1491 aaPredicted RBP22.75■■□□□ 1.23
APP-202ENST00000348990 RRAGDQ9NQL2 400 aaPredicted RBP22.75■■□□□ 1.23
APP-202ENST00000348990 USP19O94966 1318 aa22.75■■□□□ 1.23
APP-202ENST00000348990 CEP170Q5SW79 1584 aa22.74■■□□□ 1.23
APP-202ENST00000348990 KDM5DQ9BY66 1539 aa22.73■■□□□ 1.23
APP-202ENST00000348990 NKTRP30414 1462 aaKnown RBP22.73■■□□□ 1.23
APP-202ENST00000348990 INSRP06213 1382 aa22.73■■□□□ 1.23
APP-202ENST00000348990 E9PCH4 1651 aa22.73■■□□□ 1.23
APP-202ENST00000348990 GPRASP1Q5JY77 1395 aa22.73■■□□□ 1.23
APP-202ENST00000348990 EIF3AQ14152 1382 aaKnown RBP22.72■■□□□ 1.23
APP-202ENST00000348990 PDE3AQ14432 1141 aa22.72■■□□□ 1.23
APP-202ENST00000348990 MFAP1P55081 439 aaKnown RBP22.72■■□□□ 1.23
APP-202ENST00000348990 MAGI2Q86UL8 1455 aa22.72■■□□□ 1.23
APP-202ENST00000348990 RSPH4AQ5TD94 716 aa22.71■■□□□ 1.23
APP-202ENST00000348990 TBC1D2Q9BYX2 928 aa22.71■■□□□ 1.23
APP-202ENST00000348990 PDZRN3Q9UPQ7 1066 aa22.71■■□□□ 1.23
APP-202ENST00000348990 PMFBP1Q8TBY8 1022 aa22.7■■□□□ 1.23
APP-202ENST00000348990 PNNQ9H307 717 aaKnown RBP22.7■■□□□ 1.23
APP-202ENST00000348990 TNNQ9UQP3 1299 aa22.7■■□□□ 1.23
APP-202ENST00000348990 PTPRGP23470 1445 aa22.68■■□□□ 1.22
APP-202ENST00000348990 MRC2Q9UBG0 1479 aa22.68■■□□□ 1.22
APP-202ENST00000348990 SHANK2Q9UPX8 1470 aa22.68■■□□□ 1.22
APP-202ENST00000348990 WWC1Q8IX03 1113 aa22.67■■□□□ 1.22
APP-202ENST00000348990 PANK2Q9BZ23 570 aa22.67■■□□□ 1.22
APP-202ENST00000348990 ATP10BO94823 1461 aa22.67■■□□□ 1.22
APP-202ENST00000348990 PCDHB15Q9Y5E8 787 aa22.67■■□□□ 1.22
APP-202ENST00000348990 TRPM1Q7Z4N2 1603 aa22.66■■□□□ 1.22
APP-202ENST00000348990 PLA2R1Q13018 1463 aa22.66■■□□□ 1.22
APP-202ENST00000348990 CCDC141Q6ZP82 1450 aa22.66■■□□□ 1.22
APP-202ENST00000348990 FTSJ3Q8IY81 847 aaKnown RBP22.66■■□□□ 1.22
APP-202ENST00000348990 TRMT2AQ8IZ69 625 aaKnown RBP22.66■■□□□ 1.22
APP-202ENST00000348990 RWDD1Q9H446 243 aaPredicted RBP22.66■■□□□ 1.22
APP-202ENST00000348990 CROCC2H7BZ55 1655 aa22.65■■□□□ 1.22
APP-202ENST00000348990 XRCC6P12956 609 aaKnown RBP eCLIP22.64■■□□□ 1.22
APP-202ENST00000348990 IFT140Q96RY7 1462 aa22.64■■□□□ 1.22
APP-202ENST00000348990 MORC1Q86VD1 984 aa22.64■■□□□ 1.21
APP-202ENST00000348990 RLBP1P12271 317 aa22.63■■□□□ 1.21
APP-202ENST00000348990 MCM4P33991 863 aa22.63■■□□□ 1.21
APP-202ENST00000348990 TBC1D32Q96NH3 1257 aa22.62■■□□□ 1.21
APP-202ENST00000348990 CHGAP10645 457 aaKnown RBP22.62■■□□□ 1.21
APP-202ENST00000348990 WDR7Q9Y4E6 1490 aa22.61■■□□□ 1.21
APP-202ENST00000348990 GLIPR1L2Q4G1C9 344 aa22.6■■□□□ 1.21
APP-202ENST00000348990 TCP11L2Q8N4U5 519 aa22.6■■□□□ 1.21
APP-202ENST00000348990 TRAK2O60296 914 aa22.6■■□□□ 1.21
APP-202ENST00000348990 RARSP54136 660 aaKnown RBP22.6■■□□□ 1.21
APP-202ENST00000348990 ABCC10Q5T3U5 1492 aa22.6■■□□□ 1.21
APP-202ENST00000348990 C22orf23Q9BZE7 217 aa22.59■■□□□ 1.21
APP-202ENST00000348990 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
APP-202ENST00000348990 HSP90AA1P07900 732 aaKnown RBP22.59■■□□□ 1.21
APP-202ENST00000348990 CFAP70Q5T0N1 1121 aa22.59■■□□□ 1.21
APP-202ENST00000348990 ANTXR1Q9H6X2 564 aa22.58■■□□□ 1.21
APP-202ENST00000348990 PRDM15P57071 1507 aaPredicted RBP22.58■■□□□ 1.21
APP-202ENST00000348990 CDC42BPAQ5VT25 1732 aa22.58■■□□□ 1.2
APP-202ENST00000348990 HSCBQ8IWL3 235 aa22.58■■□□□ 1.2
APP-202ENST00000348990 CHMP5Q9NZZ3 219 aa22.56■■□□□ 1.2
APP-202ENST00000348990 ASXL1Q8IXJ9 1541 aa22.56■■□□□ 1.2
APP-202ENST00000348990 TRIM44Q96DX7 344 aaPredicted RBP22.56■■□□□ 1.2
APP-202ENST00000348990 MYH16Q9H6N6 1097 aa22.56■■□□□ 1.2
APP-202ENST00000348990 CARD14Q9BXL6 1004 aa22.55■■□□□ 1.2
APP-202ENST00000348990 PIK3C2GO75747 1445 aa22.55■■□□□ 1.2
APP-202ENST00000348990 FOXD4L1Q9NU39 408 aa22.54■■□□□ 1.2
APP-202ENST00000348990 SENP3Q9H4L4 574 aaPredicted RBP22.53■■□□□ 1.2
APP-202ENST00000348990 ARHGAP5Q13017 1502 aa22.53■■□□□ 1.2
APP-202ENST00000348990 ITPRIPQ8IWB1 547 aa22.53■■□□□ 1.2
APP-202ENST00000348990 RUNDC1Q96C34 613 aa22.53■■□□□ 1.2
APP-202ENST00000348990 U2AF1L5P0DN76 240 aaPredicted RBP22.53■■□□□ 1.2
APP-202ENST00000348990 U2AF1Q01081 240 aaKnown RBP eCLIP22.53■■□□□ 1.2
APP-202ENST00000348990 VSIG10Q8N0Z9 540 aa22.52■■□□□ 1.2
APP-202ENST00000348990 SYNJ2O15056 1496 aa22.52■■□□□ 1.19
APP-202ENST00000348990 NGEFQ8N5V2 710 aa22.52■■□□□ 1.19
APP-202ENST00000348990 HSP90AA2PQ14568 343 aaPredicted RBP22.51■■□□□ 1.19
APP-202ENST00000348990 SMC4Q9NTJ3 1288 aa22.5■■□□□ 1.19
APP-202ENST00000348990 NUP160Q12769 1436 aa22.5■■□□□ 1.19
APP-202ENST00000348990 ADCY10Q96PN6 1610 aa22.5■■□□□ 1.19
APP-202ENST00000348990 SYCP2Q9BX26 1530 aa22.5■■□□□ 1.19
APP-202ENST00000348990 HSP90AB1P08238 724 aaKnown RBP22.49■■□□□ 1.19
APP-202ENST00000348990 CFAP53Q96M91 514 aa22.49■■□□□ 1.19
APP-202ENST00000348990 ZKSCAN2Q63HK3 967 aa22.49■■□□□ 1.19
APP-202ENST00000348990 DZIP1LQ8IYY4 767 aaKnown RBP22.49■■□□□ 1.19
APP-202ENST00000348990 TSR2Q969E8 191 aaKnown RBP22.48■■□□□ 1.19
APP-202ENST00000348990 TRAK1Q9UPV9 953 aa22.48■■□□□ 1.19
APP-202ENST00000348990 MTHFSP49914 203 aa22.48■■□□□ 1.19
APP-202ENST00000348990 MRE11P49959 708 aa22.48■■□□□ 1.19
APP-202ENST00000348990 SLC12A5Q9H2X9 1139 aa22.48■■□□□ 1.19
APP-202ENST00000348990 NINLQ9Y2I6 1382 aa22.48■■□□□ 1.19
APP-202ENST00000348990 SCAF11Q99590 1463 aaKnown RBP22.47■■□□□ 1.19
APP-202ENST00000348990 U2SURPO15042 1029 aaKnown RBP22.47■■□□□ 1.19
APP-202ENST00000348990 EIF2AK4Q9P2K8 1649 aaKnown RBP22.46■■□□□ 1.19
APP-202ENST00000348990 MVPQ14764 893 aaKnown RBP22.46■■□□□ 1.19
APP-202ENST00000348990 GRPEL1Q9HAV7 217 aa22.46■■□□□ 1.19
APP-202ENST00000348990 AFAP1Q8N556 730 aa22.44■■□□□ 1.18
APP-202ENST00000348990 ERCC6Q03468 1493 aa22.44■■□□□ 1.18
APP-202ENST00000348990 EFCAB2Q5VUJ9 269 aa22.44■■□□□ 1.18
APP-202ENST00000348990 DDX11L8A8MPP1 907 aa22.43■■□□□ 1.18
APP-202ENST00000348990 CLCN1P35523 988 aa22.42■■□□□ 1.18
APP-202ENST00000348990 SAMD9LQ8IVG5 1584 aa22.42■■□□□ 1.18
APP-202ENST00000348990 SPAG9O60271 1321 aaKnown RBP22.42■■□□□ 1.18
APP-202ENST00000348990 KIF3BO15066 747 aa22.42■■□□□ 1.18
APP-202ENST00000348990 ARHGEF5Q12774 1597 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms