RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 KANK1Q14678 1352 aa15.12■□□□□ 0.01
MRPL55-204ENST00000348259 SLC26A8Q96RN1 970 aa15.12■□□□□ 0.01
MRPL55-204ENST00000348259 LRP6O75581 1613 aa15.1■□□□□ 0.01
MRPL55-204ENST00000348259 ANKRD30AQ9BXX3 1397 aa15.1■□□□□ 0.01
MRPL55-204ENST00000348259 PLEKHG1Q9ULL1 1385 aa15.1■□□□□ 0.01
MRPL55-204ENST00000348259 PROSER2Q86WR7 435 aaPredicted RBP15.09■□□□□ 0.01
MRPL55-204ENST00000348259 RBM33Q96EV2 1170 aaKnown RBP15.09■□□□□ 0.01
MRPL55-204ENST00000348259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.09■□□□□ 0.01
MRPL55-204ENST00000348259 SLC52A1Q9NWF4 448 aa15.09■□□□□ 0.01
MRPL55-204ENST00000348259 AHDC1Q5TGY3 1603 aaPredicted RBP15.09■□□□□ 0.01
MRPL55-204ENST00000348259 SHPRHQ149N8 1683 aa15.09■□□□□ 0.01
MRPL55-204ENST00000348259 JCADQ9P266 1359 aa15.09■□□□□ 0.01
MRPL55-204ENST00000348259 NCOA3Q9Y6Q9 1424 aa15.09■□□□□ 0.01
MRPL55-204ENST00000348259 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.08■□□□□ 0
MRPL55-204ENST00000348259 UNC13BO14795 1591 aa15.07■□□□□ 0
MRPL55-204ENST00000348259 MSH6P52701 1360 aa15.07■□□□□ 0
MRPL55-204ENST00000348259 ADAMTS13Q76LX8 1427 aa15.07■□□□□ 0
MRPL55-204ENST00000348259 DIP2AQ14689 1571 aa15.07■□□□□ 0
MRPL55-204ENST00000348259 SLAIN2Q9P270 581 aa15.06■□□□□ 0
MRPL55-204ENST00000348259 STAG3Q9UJ98 1225 aa15.05■□□□□ -0
MRPL55-204ENST00000348259 RIMS2Q9UQ26 1411 aa15.05■□□□□ -0
MRPL55-204ENST00000348259 E9PCH4 1651 aa15.05■□□□□ -0
MRPL55-204ENST00000348259 ANKRD50Q9ULJ7 1429 aa15.02■□□□□ -0
MRPL55-204ENST00000348259 CHIC2Q9UKJ5 165 aa15.02■□□□□ -0
MRPL55-204ENST00000348259 TBX22Q9Y458 520 aa15.02■□□□□ -0
MRPL55-204ENST00000348259 NRXN3Q9Y4C0 1643 aa15.01□□□□□ -0.01
MRPL55-204ENST00000348259 XRN1Q8IZH2 1706 aaKnown RBP15□□□□□ -0.01
MRPL55-204ENST00000348259 PIK3R4Q99570 1358 aa15□□□□□ -0.01
MRPL55-204ENST00000348259 IQGAP3Q86VI3 1631 aa15□□□□□ -0.01
MRPL55-204ENST00000348259 NHSL1Q5SYE7 1610 aa14.99□□□□□ -0.01
MRPL55-204ENST00000348259 SPATA31A6Q5VVP1 1343 aa14.99□□□□□ -0.01
MRPL55-204ENST00000348259 PTPRUQ92729 1446 aa14.99□□□□□ -0.01
MRPL55-204ENST00000348259 CDK12Q9NYV4 1490 aaPredicted RBP14.97□□□□□ -0.01
MRPL55-204ENST00000348259 TRPM2O94759 1503 aa14.97□□□□□ -0.01
MRPL55-204ENST00000348259 DCCP43146 1447 aa14.96□□□□□ -0.01
MRPL55-204ENST00000348259 UPF1Q92900 1129 aaKnown RBP eCLIP14.96□□□□□ -0.01
MRPL55-204ENST00000348259 SETBP1Q9Y6X0 1596 aa14.95□□□□□ -0.02
MRPL55-204ENST00000348259 C19orf44Q9H6X5 657 aa14.94□□□□□ -0.02
MRPL55-204ENST00000348259 SETD5Q9C0A6 1442 aa14.93□□□□□ -0.02
MRPL55-204ENST00000348259 SRCAPQ6ZRS2 3230 aa14.93□□□□□ -0.02
MRPL55-204ENST00000348259 ASXL1Q8IXJ9 1541 aa14.93□□□□□ -0.02
MRPL55-204ENST00000348259 CADPS2Q86UW7 1296 aa14.93□□□□□ -0.02
MRPL55-204ENST00000348259 LAMC1P11047 1609 aa14.92□□□□□ -0.02
MRPL55-204ENST00000348259 BRINP3Q76B58 766 aa14.92□□□□□ -0.02
MRPL55-204ENST00000348259 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.92□□□□□ -0.02
MRPL55-204ENST00000348259 MST1RQ04912 1400 aa14.92□□□□□ -0.02
MRPL55-204ENST00000348259 HDGFP51858 240 aaKnown RBP14.91□□□□□ -0.02
MRPL55-204ENST00000348259 ZNF772Q68DY9 489 aaPredicted RBP14.91□□□□□ -0.02
MRPL55-204ENST00000348259 ROCK1Q13464 1354 aa14.9□□□□□ -0.02
MRPL55-204ENST00000348259 NALCNQ8IZF0 1738 aa14.9□□□□□ -0.02
MRPL55-204ENST00000348259 PPP1R15AO75807 674 aaPredicted RBP14.9□□□□□ -0.02
MRPL55-204ENST00000348259 SPHKAPQ2M3C7 1700 aa14.89□□□□□ -0.03
MRPL55-204ENST00000348259 BCANQ96GW7 911 aa14.89□□□□□ -0.03
MRPL55-204ENST00000348259 APLP2Q06481 763 aa14.87□□□□□ -0.03
MRPL55-204ENST00000348259 AMOTL2Q9Y2J4 779 aa14.87□□□□□ -0.03
MRPL55-204ENST00000348259 ATF3P18847 181 aa14.86□□□□□ -0.03
MRPL55-204ENST00000348259 NUTM2DQ5VT03 806 aaPredicted RBP14.86□□□□□ -0.03
MRPL55-204ENST00000348259 RGS12O14924 1447 aa14.85□□□□□ -0.03
MRPL55-204ENST00000348259 ADGRL3Q9HAR2 1447 aa14.85□□□□□ -0.03
MRPL55-204ENST00000348259 TRIM52Q96A61 297 aa14.85□□□□□ -0.03
MRPL55-204ENST00000348259 NEXMIFQ5QGS0 1516 aa14.85□□□□□ -0.03
MRPL55-204ENST00000348259 EP400Q96L91 3159 aa14.84□□□□□ -0.03
MRPL55-204ENST00000348259 FAM50AQ14320 339 aaKnown RBP14.84□□□□□ -0.03
MRPL55-204ENST00000348259 METP08581 1390 aa14.84□□□□□ -0.03
MRPL55-204ENST00000348259 PNPLA6Q8IY17 1366 aa14.84□□□□□ -0.03
MRPL55-204ENST00000348259 RXRBP28702 533 aa14.83□□□□□ -0.04
MRPL55-204ENST00000348259 MEX3CQ5U5Q3 659 aaKnown RBP14.83□□□□□ -0.04
MRPL55-204ENST00000348259 AFF2P51816 1311 aa14.83□□□□□ -0.04
MRPL55-204ENST00000348259 PRAG1Q86YV5 1406 aa14.83□□□□□ -0.04
MRPL55-204ENST00000348259 CLTCL1P53675 1640 aa14.82□□□□□ -0.04
MRPL55-204ENST00000348259 TRIM26Q12899 539 aaPredicted RBP14.82□□□□□ -0.04
MRPL55-204ENST00000348259 C14orf37Q86TY3 774 aa14.82□□□□□ -0.04
MRPL55-204ENST00000348259 CHGAP10645 457 aaKnown RBP14.81□□□□□ -0.04
MRPL55-204ENST00000348259 NUP155O75694 1391 aa14.8□□□□□ -0.04
MRPL55-204ENST00000348259 COL22A1Q8NFW1 1626 aaPredicted RBP14.8□□□□□ -0.04
MRPL55-204ENST00000348259 C1orf167Q5SNV9 1468 aa14.78□□□□□ -0.04
MRPL55-204ENST00000348259 PTCH1Q13635 1447 aa14.78□□□□□ -0.04
MRPL55-204ENST00000348259 LRRC59Q96AG4 307 aaKnown RBP14.78□□□□□ -0.04
MRPL55-204ENST00000348259 NUTM2BA6NNL0 878 aaPredicted RBP14.77□□□□□ -0.05
MRPL55-204ENST00000348259 NUTM2EB1AL46 878 aaPredicted RBP14.77□□□□□ -0.05
MRPL55-204ENST00000348259 NUTM2AQ8IVF1 878 aaPredicted RBP14.77□□□□□ -0.05
MRPL55-204ENST00000348259 KIF1BO60333 1816 aa14.76□□□□□ -0.05
MRPL55-204ENST00000348259 RBM6P78332 1123 aaKnown RBP14.76□□□□□ -0.05
MRPL55-204ENST00000348259 DDX17Q92841 729 aaKnown RBP14.76□□□□□ -0.05
MRPL55-204ENST00000348259 MARF1Q9Y4F3 1742 aaKnown RBP14.75□□□□□ -0.05
MRPL55-204ENST00000348259 SOS2Q07890 1332 aaPredicted RBP14.74□□□□□ -0.05
MRPL55-204ENST00000348259 QTRT2Q9H974 415 aaKnown RBP14.73□□□□□ -0.05
MRPL55-204ENST00000348259 MYOM2P54296 1465 aa14.72□□□□□ -0.05
MRPL55-204ENST00000348259 C8orf37Q96NL8 207 aa14.72□□□□□ -0.05
MRPL55-204ENST00000348259 ATRNO75882 1429 aa14.72□□□□□ -0.05
MRPL55-204ENST00000348259 PPLO60437 1756 aa14.72□□□□□ -0.05
MRPL55-204ENST00000348259 ROBO2Q9HCK4 1378 aa14.72□□□□□ -0.05
MRPL55-204ENST00000348259 CDC42BPGQ6DT37 1551 aa14.7□□□□□ -0.06
MRPL55-204ENST00000348259 FNBP4Q8N3X1 1017 aaPredicted RBP14.7□□□□□ -0.06
MRPL55-204ENST00000348259 PCGF6Q9BYE7 350 aa14.7□□□□□ -0.06
MRPL55-204ENST00000348259 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.69□□□□□ -0.06
MRPL55-204ENST00000348259 PXDNQ92626 1479 aa14.69□□□□□ -0.06
MRPL55-204ENST00000348259 ORAI2Q96SN7 254 aa14.67□□□□□ -0.06
MRPL55-204ENST00000348259 ATAD2Q6PL18 1390 aa14.67□□□□□ -0.06
MRPL55-204ENST00000348259 BCL9LQ86UU0 1499 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms