RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 VGFO15240 615 aaPredicted RBP14.5□□□□□ -0.09
TRAF3-201ENST00000347662 RUFY1Q96T51 708 aa14.5□□□□□ -0.09
TRAF3-201ENST00000347662 IPO7O95373 1038 aaKnown RBP14.5□□□□□ -0.09
TRAF3-201ENST00000347662 PPM1FP49593 454 aaPredicted RBP14.5□□□□□ -0.09
TRAF3-201ENST00000347662 MCTP1Q6DN14 999 aa14.5□□□□□ -0.09
TRAF3-201ENST00000347662 GOLGA6L3A6NEY3 463 aa14.49□□□□□ -0.09
TRAF3-201ENST00000347662 CCDC144AA2RUR9 1427 aa14.49□□□□□ -0.09
TRAF3-201ENST00000347662 SKIDA1Q1XH10 827 aa14.49□□□□□ -0.09
TRAF3-201ENST00000347662 TMEM132AQ24JP5 1023 aa14.49□□□□□ -0.09
TRAF3-201ENST00000347662 NGEFQ8N5V2 710 aa14.49□□□□□ -0.09
TRAF3-201ENST00000347662 SYNE3Q6ZMZ3 975 aa14.48□□□□□ -0.09
TRAF3-201ENST00000347662 KIF3AQ9Y496 699 aa14.48□□□□□ -0.09
TRAF3-201ENST00000347662 BECN2A8MW95 431 aa14.47□□□□□ -0.09
TRAF3-201ENST00000347662 TIMELESSQ9UNS1 1208 aa14.47□□□□□ -0.09
TRAF3-201ENST00000347662 RRP7AQ9Y3A4 280 aaKnown RBP14.47□□□□□ -0.09
TRAF3-201ENST00000347662 ST20-MTHFSA0A0A6YYL1 179 aa14.47□□□□□ -0.09
TRAF3-201ENST00000347662 CCDC47Q96A33 483 aaKnown RBP14.47□□□□□ -0.09
TRAF3-201ENST00000347662 WWC2Q6AWC2 1192 aa14.46□□□□□ -0.09
TRAF3-201ENST00000347662 ZNF644Q9H582 1327 aaPredicted RBP14.46□□□□□ -0.09
TRAF3-201ENST00000347662 ATF3P18847 181 aa14.46□□□□□ -0.09
TRAF3-201ENST00000347662 CLUAP1Q96AJ1 413 aa14.46□□□□□ -0.09
TRAF3-201ENST00000347662 ELL2O00472 640 aaPredicted RBP14.46□□□□□ -0.1
TRAF3-201ENST00000347662 COG3Q96JB2 828 aa14.45□□□□□ -0.1
TRAF3-201ENST00000347662 SMC4Q9NTJ3 1288 aa14.45□□□□□ -0.1
TRAF3-201ENST00000347662 BCL11BQ9C0K0 894 aaPredicted RBP14.45□□□□□ -0.1
TRAF3-201ENST00000347662 NUTM2GQ5VZR2 741 aa14.44□□□□□ -0.1
TRAF3-201ENST00000347662 EPS15P42566 896 aa14.44□□□□□ -0.1
TRAF3-201ENST00000347662 VPS37DQ86XT2 251 aa14.44□□□□□ -0.1
TRAF3-201ENST00000347662 HOMER1Q86YM7 354 aa14.44□□□□□ -0.1
TRAF3-201ENST00000347662 ANKRD20A12PQ8NF67 263 aa14.44□□□□□ -0.1
TRAF3-201ENST00000347662 C1orf141Q5JVX7 400 aa14.44□□□□□ -0.1
TRAF3-201ENST00000347662 NESP48681 1621 aa14.44□□□□□ -0.1
TRAF3-201ENST00000347662 TRIM29Q14134 588 aa14.44□□□□□ -0.1
TRAF3-201ENST00000347662 TEX35Q5T0J7 233 aa14.44□□□□□ -0.1
TRAF3-201ENST00000347662 CDR1P51861 262 aa14.43□□□□□ -0.1
TRAF3-201ENST00000347662 CCAR1Q8IX12 1150 aaKnown RBP14.43□□□□□ -0.1
TRAF3-201ENST00000347662 CCDC191Q8NCU4 936 aa14.43□□□□□ -0.1
TRAF3-201ENST00000347662 AFAP1Q8N556 730 aa14.43□□□□□ -0.1
TRAF3-201ENST00000347662 RILPL2Q969X0 211 aa14.42□□□□□ -0.1
TRAF3-201ENST00000347662 PANK3Q9H999 370 aa14.41□□□□□ -0.1
TRAF3-201ENST00000347662 HSP90AA2PQ14568 343 aaPredicted RBP14.41□□□□□ -0.1
TRAF3-201ENST00000347662 RWDD1Q9H446 243 aaPredicted RBP14.41□□□□□ -0.1
TRAF3-201ENST00000347662 ANKRD62A6NC57 917 aa14.41□□□□□ -0.1
TRAF3-201ENST00000347662 RALBP1Q15311 655 aa14.41□□□□□ -0.1
TRAF3-201ENST00000347662 EVC2Q86UK5 1308 aa14.41□□□□□ -0.1
TRAF3-201ENST00000347662 NEFHP12036 1026 aa14.4□□□□□ -0.1
TRAF3-201ENST00000347662 TEFQ10587 303 aa14.4□□□□□ -0.1
TRAF3-201ENST00000347662 HDAC5Q9UQL6 1122 aa14.4□□□□□ -0.1
TRAF3-201ENST00000347662 NECTIN2Q92692 538 aa14.39□□□□□ -0.11
TRAF3-201ENST00000347662 ST18O60284 1047 aa14.39□□□□□ -0.11
TRAF3-201ENST00000347662 TCERG1O14776 1098 aaKnown RBP14.39□□□□□ -0.11
TRAF3-201ENST00000347662 DHX37Q8IY37 1157 aaKnown RBP14.38□□□□□ -0.11
TRAF3-201ENST00000347662 IGF1RP08069 1367 aa14.38□□□□□ -0.11
TRAF3-201ENST00000347662 RDXP35241 583 aaKnown RBP14.38□□□□□ -0.11
TRAF3-201ENST00000347662 SLC4A3P48751 1232 aa14.38□□□□□ -0.11
TRAF3-201ENST00000347662 ZRSR2Q15696 482 aaKnown RBP14.38□□□□□ -0.11
TRAF3-201ENST00000347662 KAT6BQ8WYB5 2073 aa14.38□□□□□ -0.11
TRAF3-201ENST00000347662 RCAN3Q9UKA8 241 aa14.38□□□□□ -0.11
TRAF3-201ENST00000347662 EIF2S2P20042 333 aaKnown RBP14.37□□□□□ -0.11
TRAF3-201ENST00000347662 CHMP4AQ9BY43 222 aa14.37□□□□□ -0.11
TRAF3-201ENST00000347662 WDR70Q9NW82 654 aa14.37□□□□□ -0.11
TRAF3-201ENST00000347662 UACAQ9BZF9 1416 aa14.37□□□□□ -0.11
TRAF3-201ENST00000347662 TMEM132EQ6IEE7 984 aa14.36□□□□□ -0.11
TRAF3-201ENST00000347662 FOSBP53539 338 aa14.36□□□□□ -0.11
TRAF3-201ENST00000347662 CCDC173Q0VFZ6 552 aa14.36□□□□□ -0.11
TRAF3-201ENST00000347662 BCL2L13Q9BXK5 485 aa14.36□□□□□ -0.11
TRAF3-201ENST00000347662 CC2D2AQ9P2K1 1620 aa14.36□□□□□ -0.11
TRAF3-201ENST00000347662 MTMR7Q9Y216 660 aa14.35□□□□□ -0.11
TRAF3-201ENST00000347662 IKQ13123 557 aaPredicted RBP14.35□□□□□ -0.11
TRAF3-201ENST00000347662 NOM1Q5C9Z4 860 aaKnown RBP14.35□□□□□ -0.11
TRAF3-201ENST00000347662 NFXL1Q6ZNB6 911 aa14.35□□□□□ -0.11
TRAF3-201ENST00000347662 HOOK1Q9UJC3 728 aaKnown RBP14.35□□□□□ -0.11
TRAF3-201ENST00000347662 DCTN1Q14203 1278 aa14.35□□□□□ -0.11
TRAF3-201ENST00000347662 LMOD3Q0VAK6 560 aa14.35□□□□□ -0.11
TRAF3-201ENST00000347662 TTC5Q8N0Z6 440 aa14.35□□□□□ -0.11
TRAF3-201ENST00000347662 OFD1O75665 1012 aa14.35□□□□□ -0.11
TRAF3-201ENST00000347662 FYB1O15117 783 aa14.34□□□□□ -0.11
TRAF3-201ENST00000347662 H0YHG0 523 aa14.34□□□□□ -0.11
TRAF3-201ENST00000347662 CGNL1Q0VF96 1302 aa14.34□□□□□ -0.11
TRAF3-201ENST00000347662 TTLL5Q6EMB2 1281 aa14.34□□□□□ -0.11
TRAF3-201ENST00000347662 TXNDC2Q86VQ3 553 aa14.33□□□□□ -0.11
TRAF3-201ENST00000347662 CAGE1Q8TC20 777 aa14.33□□□□□ -0.12
TRAF3-201ENST00000347662 IBSPP21815 317 aaPredicted RBP14.33□□□□□ -0.12
TRAF3-201ENST00000347662 KIF15Q9NS87 1388 aa14.33□□□□□ -0.12
TRAF3-201ENST00000347662 CPLX2Q6PUV4 134 aaKnown RBP14.33□□□□□ -0.12
TRAF3-201ENST00000347662 NLRP13Q86W25 1043 aa14.33□□□□□ -0.12
TRAF3-201ENST00000347662 PMFBP1Q8TBY8 1022 aa14.33□□□□□ -0.12
TRAF3-201ENST00000347662 PRG4Q92954 1404 aaPredicted RBP14.33□□□□□ -0.12
TRAF3-201ENST00000347662 PIP4K2BP78356 416 aa14.32□□□□□ -0.12
TRAF3-201ENST00000347662 ARHGAP5Q13017 1502 aa14.32□□□□□ -0.12
TRAF3-201ENST00000347662 ERICH2A1L162 156 aa14.32□□□□□ -0.12
TRAF3-201ENST00000347662 PPP1R1BQ9UD71 204 aaPredicted RBP14.32□□□□□ -0.12
TRAF3-201ENST00000347662 NUTM2BA6NNL0 878 aaPredicted RBP14.31□□□□□ -0.12
TRAF3-201ENST00000347662 NUTM2EB1AL46 878 aaPredicted RBP14.31□□□□□ -0.12
TRAF3-201ENST00000347662 NUTM2AQ8IVF1 878 aaPredicted RBP14.31□□□□□ -0.12
TRAF3-201ENST00000347662 RAPGEF3O95398 923 aa14.31□□□□□ -0.12
TRAF3-201ENST00000347662 SEPT7Q16181 437 aaKnown RBP14.31□□□□□ -0.12
TRAF3-201ENST00000347662 HSP90AB3PQ58FF7 597 aa14.31□□□□□ -0.12
TRAF3-201ENST00000347662 PROSER2Q86WR7 435 aaPredicted RBP14.31□□□□□ -0.12
TRAF3-201ENST00000347662 NLRP2Q9NX02 1062 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms