RNA–Protein interactions for RNA: ENST00000346606.10

CSHL1-203, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-203ENST00000346606 MSH6P52701 1360 aa22.83■■□□□ 1.25
CSHL1-203ENST00000346606 BCANQ96GW7 911 aa22.82■■□□□ 1.24
CSHL1-203ENST00000346606 JCADQ9P266 1359 aa22.8■■□□□ 1.24
CSHL1-203ENST00000346606 ZFYVE9O95405 1425 aa22.8■■□□□ 1.24
CSHL1-203ENST00000346606 PLEKHG1Q9ULL1 1385 aa22.77■■□□□ 1.24
CSHL1-203ENST00000346606 RIMS2Q9UQ26 1411 aa22.74■■□□□ 1.23
CSHL1-203ENST00000346606 APLP2Q06481 763 aa22.74■■□□□ 1.23
CSHL1-203ENST00000346606 TBX22Q9Y458 520 aa22.74■■□□□ 1.23
CSHL1-203ENST00000346606 ADGRL2O95490 1459 aa22.73■■□□□ 1.23
CSHL1-203ENST00000346606 LRP6O75581 1613 aa22.72■■□□□ 1.23
CSHL1-203ENST00000346606 PHLPP1O60346 1717 aa22.72■■□□□ 1.23
CSHL1-203ENST00000346606 RPRD2Q5VT52 1461 aaKnown RBP22.72■■□□□ 1.23
CSHL1-203ENST00000346606 SETD1AO15047 1707 aaKnown RBP22.71■■□□□ 1.23
CSHL1-203ENST00000346606 PPP1R15AO75807 674 aaPredicted RBP22.71■■□□□ 1.23
CSHL1-203ENST00000346606 COL16A1Q07092 1604 aaPredicted RBP22.71■■□□□ 1.23
CSHL1-203ENST00000346606 ANKRD50Q9ULJ7 1429 aa22.7■■□□□ 1.22
CSHL1-203ENST00000346606 ADAMTS13Q76LX8 1427 aa22.69■■□□□ 1.22
CSHL1-203ENST00000346606 NCOA3Q9Y6Q9 1424 aa22.69■■□□□ 1.22
CSHL1-203ENST00000346606 NUTM2DQ5VT03 806 aaPredicted RBP22.69■■□□□ 1.22
CSHL1-203ENST00000346606 SPATA31A6Q5VVP1 1343 aa22.68■■□□□ 1.22
CSHL1-203ENST00000346606 HDGFP51858 240 aaKnown RBP22.68■■□□□ 1.22
CSHL1-203ENST00000346606 CHD2O14647 1828 aaKnown RBP22.67■■□□□ 1.22
CSHL1-203ENST00000346606 TMEM131LA2VDJ0 1609 aa22.67■■□□□ 1.22
CSHL1-203ENST00000346606 C14orf37Q86TY3 774 aa22.66■■□□□ 1.22
CSHL1-203ENST00000346606 UPF1Q92900 1129 aaKnown RBP eCLIP22.66■■□□□ 1.22
CSHL1-203ENST00000346606 C19orf44Q9H6X5 657 aa22.66■■□□□ 1.22
CSHL1-203ENST00000346606 CHGAP10645 457 aaKnown RBP22.65■■□□□ 1.22
CSHL1-203ENST00000346606 FAM50AQ14320 339 aaKnown RBP22.65■■□□□ 1.22
CSHL1-203ENST00000346606 CADPS2Q86UW7 1296 aa22.64■■□□□ 1.21
CSHL1-203ENST00000346606 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.64■■□□□ 1.21
CSHL1-203ENST00000346606 ZNF772Q68DY9 489 aaPredicted RBP22.63■■□□□ 1.21
CSHL1-203ENST00000346606 TRIM52Q96A61 297 aa22.63■■□□□ 1.21
CSHL1-203ENST00000346606 MEX3CQ5U5Q3 659 aaKnown RBP22.62■■□□□ 1.21
CSHL1-203ENST00000346606 ATF3P18847 181 aa22.61■■□□□ 1.21
CSHL1-203ENST00000346606 MYO5BQ9ULV0 1848 aa22.61■■□□□ 1.21
CSHL1-203ENST00000346606 GCC2Q8IWJ2 1684 aa22.61■■□□□ 1.21
CSHL1-203ENST00000346606 AHDC1Q5TGY3 1603 aaPredicted RBP22.6■■□□□ 1.21
CSHL1-203ENST00000346606 BRINP3Q76B58 766 aa22.6■■□□□ 1.21
CSHL1-203ENST00000346606 PIK3R4Q99570 1358 aa22.6■■□□□ 1.21
CSHL1-203ENST00000346606 PTPRUQ92729 1446 aa22.59■■□□□ 1.21
CSHL1-203ENST00000346606 AMOTL2Q9Y2J4 779 aa22.59■■□□□ 1.21
CSHL1-203ENST00000346606 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.57■■□□□ 1.2
CSHL1-203ENST00000346606 NUTM2BA6NNL0 878 aaPredicted RBP22.55■■□□□ 1.2
CSHL1-203ENST00000346606 NUTM2EB1AL46 878 aaPredicted RBP22.55■■□□□ 1.2
CSHL1-203ENST00000346606 RXRBP28702 533 aa22.55■■□□□ 1.2
CSHL1-203ENST00000346606 NUTM2AQ8IVF1 878 aaPredicted RBP22.55■■□□□ 1.2
CSHL1-203ENST00000346606 DIP2AQ14689 1571 aa22.54■■□□□ 1.2
CSHL1-203ENST00000346606 UNC13BO14795 1591 aa22.53■■□□□ 1.2
CSHL1-203ENST00000346606 SHPRHQ149N8 1683 aa22.52■■□□□ 1.2
CSHL1-203ENST00000346606 E9PCH4 1651 aa22.51■■□□□ 1.19
CSHL1-203ENST00000346606 TRPM2O94759 1503 aa22.49■■□□□ 1.19
CSHL1-203ENST00000346606 AFF2P51816 1311 aa22.49■■□□□ 1.19
CSHL1-203ENST00000346606 SETD5Q9C0A6 1442 aa22.48■■□□□ 1.19
CSHL1-203ENST00000346606 DCCP43146 1447 aa22.48■■□□□ 1.19
CSHL1-203ENST00000346606 MST1RQ04912 1400 aa22.48■■□□□ 1.19
CSHL1-203ENST00000346606 ASXL1Q8IXJ9 1541 aa22.47■■□□□ 1.19
CSHL1-203ENST00000346606 DDX17Q92841 729 aaKnown RBP22.47■■□□□ 1.19
CSHL1-203ENST00000346606 CDK12Q9NYV4 1490 aaPredicted RBP22.47■■□□□ 1.19
CSHL1-203ENST00000346606 NUP155O75694 1391 aa22.46■■□□□ 1.19
CSHL1-203ENST00000346606 METP08581 1390 aa22.46■■□□□ 1.19
CSHL1-203ENST00000346606 ROCK1Q13464 1354 aa22.46■■□□□ 1.19
CSHL1-203ENST00000346606 IQGAP3Q86VI3 1631 aa22.43■■□□□ 1.18
CSHL1-203ENST00000346606 LRRC59Q96AG4 307 aaKnown RBP22.43■■□□□ 1.18
CSHL1-203ENST00000346606 NRXN3Q9Y4C0 1643 aa22.42■■□□□ 1.18
CSHL1-203ENST00000346606 SRCAPQ6ZRS2 3230 aa22.41■■□□□ 1.18
CSHL1-203ENST00000346606 XRN1Q8IZH2 1706 aaKnown RBP22.41■■□□□ 1.18
CSHL1-203ENST00000346606 C8orf37Q96NL8 207 aa22.41■■□□□ 1.18
CSHL1-203ENST00000346606 SETBP1Q9Y6X0 1596 aa22.41■■□□□ 1.18
CSHL1-203ENST00000346606 QTRT2Q9H974 415 aaKnown RBP22.4■■□□□ 1.18
CSHL1-203ENST00000346606 RGS12O14924 1447 aa22.4■■□□□ 1.18
CSHL1-203ENST00000346606 PNPLA6Q8IY17 1366 aa22.39■■□□□ 1.18
CSHL1-203ENST00000346606 RBM6P78332 1123 aaKnown RBP22.38■■□□□ 1.17
CSHL1-203ENST00000346606 NHSL1Q5SYE7 1610 aa22.37■■□□□ 1.17
CSHL1-203ENST00000346606 ZNF326Q5BKZ1 582 aaKnown RBP22.36■■□□□ 1.17
CSHL1-203ENST00000346606 ADGRL3Q9HAR2 1447 aa22.36■■□□□ 1.17
CSHL1-203ENST00000346606 ITGAEP38570 1179 aa22.35■■□□□ 1.17
CSHL1-203ENST00000346606 ADAMTS2O95450 1211 aa22.33■■□□□ 1.17
CSHL1-203ENST00000346606 C1orf167Q5SNV9 1468 aa22.31■■□□□ 1.16
CSHL1-203ENST00000346606 NGLY1Q96IV0 654 aa22.31■■□□□ 1.16
CSHL1-203ENST00000346606 ORAI2Q96SN7 254 aa22.29■■□□□ 1.16
CSHL1-203ENST00000346606 SOS2Q07890 1332 aaPredicted RBP22.28■■□□□ 1.16
CSHL1-203ENST00000346606 NEXMIFQ5QGS0 1516 aa22.27■■□□□ 1.16
CSHL1-203ENST00000346606 ROBO2Q9HCK4 1378 aa22.26■■□□□ 1.15
CSHL1-203ENST00000346606 NALCNQ8IZF0 1738 aa22.26■■□□□ 1.15
CSHL1-203ENST00000346606 USP21Q9UK80 565 aa22.24■■□□□ 1.15
CSHL1-203ENST00000346606 SPHKAPQ2M3C7 1700 aa22.23■■□□□ 1.15
CSHL1-203ENST00000346606 FNBP4Q8N3X1 1017 aaPredicted RBP22.23■■□□□ 1.15
CSHL1-203ENST00000346606 CLTCL1P53675 1640 aa22.22■■□□□ 1.15
CSHL1-203ENST00000346606 PTCH1Q13635 1447 aa22.22■■□□□ 1.15
CSHL1-203ENST00000346606 PPARGC1BQ86YN6 1023 aaKnown RBP22.21■■□□□ 1.15
CSHL1-203ENST00000346606 LAMC1P11047 1609 aa22.2■■□□□ 1.15
CSHL1-203ENST00000346606 TRPC5Q9UL62 973 aaPredicted RBP22.2■■□□□ 1.14
CSHL1-203ENST00000346606 ATAD2Q6PL18 1390 aa22.2■■□□□ 1.14
CSHL1-203ENST00000346606 ATRNO75882 1429 aa22.18■■□□□ 1.14
CSHL1-203ENST00000346606 VGFO15240 615 aaPredicted RBP22.16■■□□□ 1.14
CSHL1-203ENST00000346606 PRAG1Q86YV5 1406 aa22.15■■□□□ 1.14
CSHL1-203ENST00000346606 EP400Q96L91 3159 aa22.13■■□□□ 1.13
CSHL1-203ENST00000346606 MYOM2P54296 1465 aa22.13■■□□□ 1.13
CSHL1-203ENST00000346606 BCL9LQ86UU0 1499 aa22.13■■□□□ 1.13
CSHL1-203ENST00000346606 ESCO1Q5FWF5 840 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms