RNA–Protein interactions for RNA: ENST00000345127.8

PRICKLE1-201, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRICKLE1, Length 5,902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-201ENST00000345127 C9orf78Q9NZ63 289 aaPredicted RBP18■□□□□ 0.47
PRICKLE1-201ENST00000345127 DZIP1LQ8IYY4 767 aaKnown RBP17.99■□□□□ 0.47
PRICKLE1-201ENST00000345127 STAC3Q96MF2 364 aa17.99■□□□□ 0.47
PRICKLE1-201ENST00000345127 SLC4A3P48751 1232 aa17.99■□□□□ 0.47
PRICKLE1-201ENST00000345127 CNTLNQ9NXG0 1405 aa17.99■□□□□ 0.47
PRICKLE1-201ENST00000345127 GRIN2BQ13224 1484 aa17.99■□□□□ 0.47
PRICKLE1-201ENST00000345127 API5Q9BZZ5 524 aaKnown RBP17.98■□□□□ 0.47
PRICKLE1-201ENST00000345127 MIA2Q96PC5 1412 aa17.98■□□□□ 0.47
PRICKLE1-201ENST00000345127 PHF14O94880 888 aa17.97■□□□□ 0.47
PRICKLE1-201ENST00000345127 DDX11L8A8MPP1 907 aa17.97■□□□□ 0.47
PRICKLE1-201ENST00000345127 SF3A1Q15459 793 aaKnown RBP17.97■□□□□ 0.47
PRICKLE1-201ENST00000345127 NCBP3Q53F19 620 aaKnown RBP17.97■□□□□ 0.47
PRICKLE1-201ENST00000345127 DIAPH3Q9NSV4 1193 aa17.97■□□□□ 0.47
PRICKLE1-201ENST00000345127 H3BQV1 296 aa17.97■□□□□ 0.47
PRICKLE1-201ENST00000345127 IFFO2Q5TF58 517 aa17.97■□□□□ 0.47
PRICKLE1-201ENST00000345127 CABP2Q9NPB3 220 aa17.96■□□□□ 0.47
PRICKLE1-201ENST00000345127 HMOX1P09601 288 aa17.96■□□□□ 0.47
PRICKLE1-201ENST00000345127 ERICH3Q5RHP9 1530 aa17.95■□□□□ 0.46
PRICKLE1-201ENST00000345127 TMEM132EQ6IEE7 984 aa17.95■□□□□ 0.46
PRICKLE1-201ENST00000345127 CREBRFQ8IUR6 639 aa17.95■□□□□ 0.46
PRICKLE1-201ENST00000345127 GGNBP2Q9H3C7 697 aa17.95■□□□□ 0.46
PRICKLE1-201ENST00000345127 FAM184AQ8NB25 1140 aa17.94■□□□□ 0.46
PRICKLE1-201ENST00000345127 FKBP5Q13451 457 aaPredicted RBP17.94■□□□□ 0.46
PRICKLE1-201ENST00000345127 ROCK1Q13464 1354 aa17.94■□□□□ 0.46
PRICKLE1-201ENST00000345127 SYNJ1O43426 1573 aa17.93■□□□□ 0.46
PRICKLE1-201ENST00000345127 GNAI1P63096 354 aa17.93■□□□□ 0.46
PRICKLE1-201ENST00000345127 TSPYL4Q9UJ04 414 aa17.93■□□□□ 0.46
PRICKLE1-201ENST00000345127 SYNJ2O15056 1496 aa17.92■□□□□ 0.46
PRICKLE1-201ENST00000345127 ARAP1Q96P48 1450 aa17.92■□□□□ 0.46
PRICKLE1-201ENST00000345127 DDX58O95786 925 aaKnown RBP17.92■□□□□ 0.46
PRICKLE1-201ENST00000345127 IFIT2P09913 472 aaKnown RBP17.92■□□□□ 0.46
PRICKLE1-201ENST00000345127 AMER1Q5JTC6 1135 aaPredicted RBP17.92■□□□□ 0.46
PRICKLE1-201ENST00000345127 AFAP1Q8N556 730 aa17.92■□□□□ 0.46
PRICKLE1-201ENST00000345127 FOXD4L6Q3SYB3 417 aaPredicted RBP17.92■□□□□ 0.46
PRICKLE1-201ENST00000345127 FOXD4L3Q6VB84 417 aaPredicted RBP17.92■□□□□ 0.46
PRICKLE1-201ENST00000345127 RUFY2Q8WXA3 655 aa17.92■□□□□ 0.46
PRICKLE1-201ENST00000345127 MARCH6O60337 910 aa17.91■□□□□ 0.46
PRICKLE1-201ENST00000345127 REC8O95072 547 aa17.91■□□□□ 0.46
PRICKLE1-201ENST00000345127 SYTL4Q96C24 671 aaPredicted RBP17.91■□□□□ 0.46
PRICKLE1-201ENST00000345127 CFTRP13569 1480 aa17.91■□□□□ 0.46
PRICKLE1-201ENST00000345127 RRBP1Q9P2E9 1410 aaKnown RBP17.9■□□□□ 0.46
PRICKLE1-201ENST00000345127 ARID3AQ99856 593 aa17.9■□□□□ 0.46
PRICKLE1-201ENST00000345127 LRRFIP1Q32MZ4 808 aaKnown RBP17.9■□□□□ 0.46
PRICKLE1-201ENST00000345127 VPS53Q5VIR6 699 aa17.9■□□□□ 0.46
PRICKLE1-201ENST00000345127 DDX49Q9Y6V7 483 aaKnown RBP17.9■□□□□ 0.46
PRICKLE1-201ENST00000345127 PRG4Q92954 1404 aaPredicted RBP17.9■□□□□ 0.46
PRICKLE1-201ENST00000345127 NOC3LQ8WTT2 800 aaKnown RBP17.89■□□□□ 0.45
PRICKLE1-201ENST00000345127 CHMP4CQ96CF2 233 aa17.89■□□□□ 0.45
PRICKLE1-201ENST00000345127 ATP6V1DQ9Y5K8 247 aa17.89■□□□□ 0.45
PRICKLE1-201ENST00000345127 WASHC2AQ641Q2 1341 aa17.89■□□□□ 0.45
PRICKLE1-201ENST00000345127 NUTM2GQ5VZR2 741 aa17.88■□□□□ 0.45
PRICKLE1-201ENST00000345127 AKAP17AQ02040 695 aaKnown RBP17.88■□□□□ 0.45
PRICKLE1-201ENST00000345127 ANO2Q9NQ90 1003 aa17.88■□□□□ 0.45
PRICKLE1-201ENST00000345127 MSH5O43196 834 aa17.88■□□□□ 0.45
PRICKLE1-201ENST00000345127 CFAP70Q5T0N1 1121 aa17.87■□□□□ 0.45
PRICKLE1-201ENST00000345127 ZKSCAN1P17029 563 aaPredicted RBP17.87■□□□□ 0.45
PRICKLE1-201ENST00000345127 G3BP1Q13283 466 aaKnown RBP eCLIP17.87■□□□□ 0.45
PRICKLE1-201ENST00000345127 SYNE3Q6ZMZ3 975 aa17.87■□□□□ 0.45
PRICKLE1-201ENST00000345127 USP35Q9P2H5 1018 aa17.87■□□□□ 0.45
PRICKLE1-201ENST00000345127 ATF3P18847 181 aa17.87■□□□□ 0.45
PRICKLE1-201ENST00000345127 RAPGEF4Q8WZA2 1011 aa17.87■□□□□ 0.45
PRICKLE1-201ENST00000345127 MCTP1Q6DN14 999 aa17.86■□□□□ 0.45
PRICKLE1-201ENST00000345127 BRD4O60885 1362 aaPredicted RBP17.86■□□□□ 0.45
PRICKLE1-201ENST00000345127 ADAMTS8Q9UP79 889 aa17.86■□□□□ 0.45
PRICKLE1-201ENST00000345127 NESP48681 1621 aa17.86■□□□□ 0.45
PRICKLE1-201ENST00000345127 SKOR2Q2VWA4 1001 aaPredicted RBP17.85■□□□□ 0.45
PRICKLE1-201ENST00000345127 EHBP1L1Q8N3D4 1523 aa17.85■□□□□ 0.45
PRICKLE1-201ENST00000345127 PANK1Q8TE04 598 aa17.85■□□□□ 0.45
PRICKLE1-201ENST00000345127 EFCAB5A4FU69 1503 aa17.85■□□□□ 0.45
PRICKLE1-201ENST00000345127 MTHFSP49914 203 aa17.85■□□□□ 0.45
PRICKLE1-201ENST00000345127 MRC2Q9UBG0 1479 aa17.84■□□□□ 0.45
PRICKLE1-201ENST00000345127 APPP05067 770 aa17.84■□□□□ 0.45
PRICKLE1-201ENST00000345127 NOL10Q9BSC4 688 aaKnown RBP17.84■□□□□ 0.45
PRICKLE1-201ENST00000345127 LNPKQ9C0E8 428 aa17.83■□□□□ 0.45
PRICKLE1-201ENST00000345127 NLRP6P59044 892 aa17.83■□□□□ 0.44
PRICKLE1-201ENST00000345127 TPD52L1Q16890 204 aaPredicted RBP17.82■□□□□ 0.44
PRICKLE1-201ENST00000345127 AMOTL1Q8IY63 956 aa17.82■□□□□ 0.44
PRICKLE1-201ENST00000345127 NLRP2Q9NX02 1062 aa17.82■□□□□ 0.44
PRICKLE1-201ENST00000345127 PES1O00541 588 aaKnown RBP17.82■□□□□ 0.44
PRICKLE1-201ENST00000345127 C9orf84Q5VXU9 1444 aa17.82■□□□□ 0.44
PRICKLE1-201ENST00000345127 INTS3Q68E01 1043 aaKnown RBP17.82■□□□□ 0.44
PRICKLE1-201ENST00000345127 CPLX2Q6PUV4 134 aaKnown RBP17.82■□□□□ 0.44
PRICKLE1-201ENST00000345127 AIMP1Q12904 312 aaKnown RBP17.81■□□□□ 0.44
PRICKLE1-201ENST00000345127 RIC3Q7Z5B4 369 aa17.81■□□□□ 0.44
PRICKLE1-201ENST00000345127 VPS37DQ86XT2 251 aa17.81■□□□□ 0.44
PRICKLE1-201ENST00000345127 GOLGA6L19H0YKK7 550 aa17.81■□□□□ 0.44
PRICKLE1-201ENST00000345127 PPP2R1AP30153 589 aa17.81■□□□□ 0.44
PRICKLE1-201ENST00000345127 HSP90AB4PQ58FF6 505 aa17.81■□□□□ 0.44
PRICKLE1-201ENST00000345127 IFT140Q96RY7 1462 aa17.8■□□□□ 0.44
PRICKLE1-201ENST00000345127 RNF20Q5VTR2 975 aa17.8■□□□□ 0.44
PRICKLE1-201ENST00000345127 TPM3P06753 285 aa17.8■□□□□ 0.44
PRICKLE1-201ENST00000345127 TRIM29Q14134 588 aa17.8■□□□□ 0.44
PRICKLE1-201ENST00000345127 NBPF1Q3BBV0 1214 aa17.8■□□□□ 0.44
PRICKLE1-201ENST00000345127 MEX3CQ5U5Q3 659 aaKnown RBP17.8■□□□□ 0.44
PRICKLE1-201ENST00000345127 TCP11L2Q8N4U5 519 aa17.79■□□□□ 0.44
PRICKLE1-201ENST00000345127 TOP2BQ02880 1626 aa17.79■□□□□ 0.44
PRICKLE1-201ENST00000345127 BECN2A8MW95 431 aa17.79■□□□□ 0.44
PRICKLE1-201ENST00000345127 GSE1Q14687 1217 aa17.79■□□□□ 0.44
PRICKLE1-201ENST00000345127 HFM1A2PYH4 1435 aa17.79■□□□□ 0.44
PRICKLE1-201ENST00000345127 HECW1Q76N89 1606 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms