RNA–Protein interactions for RNA: ENST00000345093.8

RNF41-201, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 5,596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-201ENST00000345093 SMC4Q9NTJ3 1288 aa12.34□□□□□ -0.43
RNF41-201ENST00000345093 RBM19Q9Y4C8 960 aaKnown RBP12.33□□□□□ -0.44
RNF41-201ENST00000345093 TSHZ2Q9NRE2 1034 aa12.32□□□□□ -0.44
RNF41-201ENST00000345093 FAM135AQ9P2D6 1515 aa12.32□□□□□ -0.44
RNF41-201ENST00000345093 FRAT1Q92837 279 aaPredicted RBP12.32□□□□□ -0.44
RNF41-201ENST00000345093 FRAT2O75474 233 aaPredicted RBP12.31□□□□□ -0.44
RNF41-201ENST00000345093 PLEKHO1Q53GL0 409 aaPredicted RBP12.31□□□□□ -0.44
RNF41-201ENST00000345093 ISY1Q9ULR0 285 aaKnown RBP12.31□□□□□ -0.44
RNF41-201ENST00000345093 WDR7Q9Y4E6 1490 aa12.31□□□□□ -0.44
RNF41-201ENST00000345093 NLRP2Q9NX02 1062 aa12.31□□□□□ -0.44
RNF41-201ENST00000345093 TATP17735 454 aaPredicted RBP12.3□□□□□ -0.44
RNF41-201ENST00000345093 KCNH5Q8NCM2 988 aa12.3□□□□□ -0.44
RNF41-201ENST00000345093 PIP4K2BP78356 416 aa12.3□□□□□ -0.44
RNF41-201ENST00000345093 KIAA1211Q6ZU35 1233 aa12.3□□□□□ -0.44
RNF41-201ENST00000345093 TRIM34Q9BYJ4 488 aa12.3□□□□□ -0.44
RNF41-201ENST00000345093 DIAPH1O60610 1272 aaKnown RBP12.3□□□□□ -0.44
RNF41-201ENST00000345093 ASXL2Q76L83 1435 aa12.3□□□□□ -0.44
RNF41-201ENST00000345093 FANCIQ9NVI1 1328 aa12.29□□□□□ -0.44
RNF41-201ENST00000345093 ZNF608Q9ULD9 1512 aaPredicted RBP12.29□□□□□ -0.44
RNF41-201ENST00000345093 NLRP6P59044 892 aa12.29□□□□□ -0.44
RNF41-201ENST00000345093 CHMP3Q9Y3E7 222 aa12.29□□□□□ -0.44
RNF41-201ENST00000345093 ATAD2Q6PL18 1390 aa12.29□□□□□ -0.44
RNF41-201ENST00000345093 GLIPR1L2Q4G1C9 344 aa12.29□□□□□ -0.44
RNF41-201ENST00000345093 SYTL4Q96C24 671 aaPredicted RBP12.29□□□□□ -0.44
RNF41-201ENST00000345093 SPG7Q9UQ90 795 aa12.29□□□□□ -0.44
RNF41-201ENST00000345093 CADPS2Q86UW7 1296 aa12.28□□□□□ -0.44
RNF41-201ENST00000345093 ABTB2Q8N961 1025 aa12.28□□□□□ -0.44
RNF41-201ENST00000345093 MYBBP1AQ9BQG0 1328 aaKnown RBP12.28□□□□□ -0.44
RNF41-201ENST00000345093 GAS2L2Q8NHY3 880 aa12.28□□□□□ -0.44
RNF41-201ENST00000345093 MSH6P52701 1360 aa12.28□□□□□ -0.44
RNF41-201ENST00000345093 TNRQ92752 1358 aa12.28□□□□□ -0.44
RNF41-201ENST00000345093 ZNF518AQ6AHZ1 1483 aa12.27□□□□□ -0.45
RNF41-201ENST00000345093 PNISRQ8TF01 805 aaKnown RBP12.27□□□□□ -0.45
RNF41-201ENST00000345093 IRX6P78412 446 aaPredicted RBP12.27□□□□□ -0.45
RNF41-201ENST00000345093 RTEL1-TNFRSF6BF6WH68 1400 aa12.27□□□□□ -0.45
RNF41-201ENST00000345093 RBM33Q96EV2 1170 aaKnown RBP12.26□□□□□ -0.45
RNF41-201ENST00000345093 PTMSP20962 102 aa12.25□□□□□ -0.45
RNF41-201ENST00000345093 NUTM2BA6NNL0 878 aaPredicted RBP12.25□□□□□ -0.45
RNF41-201ENST00000345093 NUTM2EB1AL46 878 aaPredicted RBP12.25□□□□□ -0.45
RNF41-201ENST00000345093 NUTM2AQ8IVF1 878 aaPredicted RBP12.25□□□□□ -0.45
RNF41-201ENST00000345093 CTDP1Q9Y5B0 961 aaPredicted RBP12.25□□□□□ -0.45
RNF41-201ENST00000345093 KIAA1107Q9UPP5 1409 aa12.24□□□□□ -0.45
RNF41-201ENST00000345093 CCDC34Q96HJ3 373 aa12.24□□□□□ -0.45
RNF41-201ENST00000345093 USP47Q96K76 1375 aa12.24□□□□□ -0.45
RNF41-201ENST00000345093 PRDM11Q9NQV5 511 aa12.24□□□□□ -0.45
RNF41-201ENST00000345093 PCF11O94913 1555 aaKnown RBP12.24□□□□□ -0.45
RNF41-201ENST00000345093 RWDD1Q9H446 243 aaPredicted RBP12.24□□□□□ -0.45
RNF41-201ENST00000345093 ERBINQ96RT1 1412 aa12.24□□□□□ -0.45
RNF41-201ENST00000345093 CCDC7Q96M83 1385 aa12.24□□□□□ -0.45
RNF41-201ENST00000345093 ZNF644Q9H582 1327 aaPredicted RBP12.24□□□□□ -0.45
RNF41-201ENST00000345093 ADAMTS12P58397 1594 aa12.24□□□□□ -0.45
RNF41-201ENST00000345093 DHX29Q7Z478 1369 aaKnown RBP12.23□□□□□ -0.45
RNF41-201ENST00000345093 PRKRIP1Q9H875 184 aaPredicted RBP12.23□□□□□ -0.45
RNF41-201ENST00000345093 PLCH2O75038 1416 aa12.23□□□□□ -0.45
RNF41-201ENST00000345093 KIF6Q6ZMV9 814 aa12.22□□□□□ -0.45
RNF41-201ENST00000345093 ARHGEF11O15085 1522 aa12.22□□□□□ -0.45
RNF41-201ENST00000345093 TOM1L2Q6ZVM7 507 aa12.22□□□□□ -0.45
RNF41-201ENST00000345093 KLHL34Q8N239 644 aa12.22□□□□□ -0.45
RNF41-201ENST00000345093 PMFBP1Q8TBY8 1022 aa12.22□□□□□ -0.45
RNF41-201ENST00000345093 USP35Q9P2H5 1018 aa12.22□□□□□ -0.45
RNF41-201ENST00000345093 HTATSF1O43719 755 aaKnown RBP12.22□□□□□ -0.45
RNF41-201ENST00000345093 RCAN3Q9UKA8 241 aa12.22□□□□□ -0.45
RNF41-201ENST00000345093 NBR1Q14596 966 aa12.21□□□□□ -0.45
RNF41-201ENST00000345093 ABCC10Q5T3U5 1492 aa12.21□□□□□ -0.45
RNF41-201ENST00000345093 ABCC2Q92887 1545 aa12.21□□□□□ -0.46
RNF41-201ENST00000345093 CWC22Q9HCG8 908 aaKnown RBP12.21□□□□□ -0.46
RNF41-201ENST00000345093 ST20-MTHFSA0A0A6YYL1 179 aa12.21□□□□□ -0.46
RNF41-201ENST00000345093 CFAP74Q9C0B2 1584 aa12.2□□□□□ -0.46
RNF41-201ENST00000345093 GOLGA6L6A8MZA4 724 aa12.2□□□□□ -0.46
RNF41-201ENST00000345093 CFAP43Q8NDM7 1665 aa12.2□□□□□ -0.46
RNF41-201ENST00000345093 RAPGEF6Q8TEU7 1601 aa12.2□□□□□ -0.46
RNF41-201ENST00000345093 CAMSAP2Q08AD1 1489 aa12.2□□□□□ -0.46
RNF41-201ENST00000345093 PANK3Q9H999 370 aa12.2□□□□□ -0.46
RNF41-201ENST00000345093 EIF4G3O43432 1585 aaKnown RBP12.2□□□□□ -0.46
RNF41-201ENST00000345093 KIF21AQ7Z4S6 1674 aa12.19□□□□□ -0.46
RNF41-201ENST00000345093 AAMPQ13685 434 aa12.19□□□□□ -0.46
RNF41-201ENST00000345093 GNL2Q13823 731 aaKnown RBP12.19□□□□□ -0.46
RNF41-201ENST00000345093 HSP90AB4PQ58FF6 505 aa12.19□□□□□ -0.46
RNF41-201ENST00000345093 VPS37DQ86XT2 251 aa12.19□□□□□ -0.46
RNF41-201ENST00000345093 UHRF1BP1Q6BDS2 1440 aa12.19□□□□□ -0.46
RNF41-201ENST00000345093 UGGT2Q9NYU1 1516 aa12.19□□□□□ -0.46
RNF41-201ENST00000345093 GNAI1P63096 354 aa12.19□□□□□ -0.46
RNF41-201ENST00000345093 PRAM1Q96QH2 718 aa12.19□□□□□ -0.46
RNF41-201ENST00000345093 UBAP1LF5GYI3 381 aa12.19□□□□□ -0.46
RNF41-201ENST00000345093 KIF3AQ9Y496 699 aa12.19□□□□□ -0.46
RNF41-201ENST00000345093 BRD4O60885 1362 aaPredicted RBP12.18□□□□□ -0.46
RNF41-201ENST00000345093 NAP1L2Q9ULW6 460 aaPredicted RBP12.18□□□□□ -0.46
RNF41-201ENST00000345093 L1TD1Q5T7N2 865 aaKnown RBP12.18□□□□□ -0.46
RNF41-201ENST00000345093 STRN4Q9NRL3 753 aa12.18□□□□□ -0.46
RNF41-201ENST00000345093 ITSN2Q9NZM3 1697 aa12.17□□□□□ -0.46
RNF41-201ENST00000345093 API5Q9BZZ5 524 aaKnown RBP12.17□□□□□ -0.46
RNF41-201ENST00000345093 C11orf95C9JLR9 678 aaPredicted RBP12.17□□□□□ -0.46
RNF41-201ENST00000345093 IPO9Q96P70 1041 aaKnown RBP12.17□□□□□ -0.46
RNF41-201ENST00000345093 B4GALNT3Q6L9W6 998 aa12.17□□□□□ -0.46
RNF41-201ENST00000345093 UHRF1BP1LA0JNW5 1464 aa12.17□□□□□ -0.46
RNF41-201ENST00000345093 CDK13Q14004 1512 aaKnown RBP12.16□□□□□ -0.46
RNF41-201ENST00000345093 ITPRIPQ8IWB1 547 aa12.16□□□□□ -0.46
RNF41-201ENST00000345093 PTPN23Q9H3S7 1636 aa12.16□□□□□ -0.46
RNF41-201ENST00000345093 NUP160Q12769 1436 aa12.16□□□□□ -0.46
RNF41-201ENST00000345093 WDHD1O75717 1129 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms