RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 PPP1R15AO75807 674 aaPredicted RBP30.87■■■□□ 2.53
KCNQ2-201ENST00000344425 NKTRP30414 1462 aaKnown RBP30.87■■■□□ 2.53
KCNQ2-201ENST00000344425 RBM33Q96EV2 1170 aaKnown RBP30.86■■■□□ 2.53
KCNQ2-201ENST00000344425 PLEKHG1Q9ULL1 1385 aa30.84■■■□□ 2.53
KCNQ2-201ENST00000344425 ZFYVE9O95405 1425 aa30.83■■■□□ 2.53
KCNQ2-201ENST00000344425 NWD1Q149M9 1564 aa30.83■■■□□ 2.53
KCNQ2-201ENST00000344425 MSH6P52701 1360 aa30.82■■■□□ 2.52
KCNQ2-201ENST00000344425 RIMS2Q9UQ26 1411 aa30.82■■■□□ 2.52
KCNQ2-201ENST00000344425 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.81■■■□□ 2.52
KCNQ2-201ENST00000344425 CHGAP10645 457 aaKnown RBP30.8■■■□□ 2.52
KCNQ2-201ENST00000344425 ROCK1Q13464 1354 aa30.79■■■□□ 2.52
KCNQ2-201ENST00000344425 GCC2Q8IWJ2 1684 aa30.78■■■□□ 2.52
KCNQ2-201ENST00000344425 UNC13BO14795 1591 aa30.78■■■□□ 2.52
KCNQ2-201ENST00000344425 RGS17Q9UGC6 210 aaPredicted RBP30.77■■■□□ 2.52
KCNQ2-201ENST00000344425 TBX22Q9Y458 520 aa30.77■■■□□ 2.52
KCNQ2-201ENST00000344425 TMEM131LA2VDJ0 1609 aa30.76■■■□□ 2.52
KCNQ2-201ENST00000344425 ROBO1Q9Y6N7 1651 aa30.76■■■□□ 2.51
KCNQ2-201ENST00000344425 SLAIN2Q9P270 581 aa30.75■■■□□ 2.51
KCNQ2-201ENST00000344425 MYO5BQ9ULV0 1848 aa30.73■■■□□ 2.51
KCNQ2-201ENST00000344425 CHD2O14647 1828 aaKnown RBP30.7■■■□□ 2.5
KCNQ2-201ENST00000344425 NCOA3Q9Y6Q9 1424 aa30.69■■■□□ 2.5
KCNQ2-201ENST00000344425 E9PCH4 1651 aa30.68■■■□□ 2.5
KCNQ2-201ENST00000344425 NUP155O75694 1391 aa30.68■■■□□ 2.5
KCNQ2-201ENST00000344425 IQGAP3Q86VI3 1631 aa30.66■■■□□ 2.5
KCNQ2-201ENST00000344425 NUTM2DQ5VT03 806 aaPredicted RBP30.66■■■□□ 2.5
KCNQ2-201ENST00000344425 C14orf37Q86TY3 774 aa30.66■■■□□ 2.5
KCNQ2-201ENST00000344425 ITGAEP38570 1179 aa30.65■■■□□ 2.5
KCNQ2-201ENST00000344425 PIK3R4Q99570 1358 aa30.64■■■□□ 2.5
KCNQ2-201ENST00000344425 ADAMTS13Q76LX8 1427 aa30.63■■■□□ 2.49
KCNQ2-201ENST00000344425 DIP2AQ14689 1571 aa30.62■■■□□ 2.49
KCNQ2-201ENST00000344425 JCADQ9P266 1359 aa30.61■■■□□ 2.49
KCNQ2-201ENST00000344425 POTEAQ6S8J7 498 aa30.6■■■□□ 2.49
KCNQ2-201ENST00000344425 CADPS2Q86UW7 1296 aa30.59■■■□□ 2.49
KCNQ2-201ENST00000344425 C19orf44Q9H6X5 657 aa30.59■■■□□ 2.49
KCNQ2-201ENST00000344425 PHLPP1O60346 1717 aa30.59■■■□□ 2.49
KCNQ2-201ENST00000344425 ATF3P18847 181 aa30.57■■■□□ 2.48
KCNQ2-201ENST00000344425 AMOTL2Q9Y2J4 779 aa30.55■■■□□ 2.48
KCNQ2-201ENST00000344425 TRPM2O94759 1503 aa30.54■■■□□ 2.48
KCNQ2-201ENST00000344425 PPARGC1BQ86YN6 1023 aaKnown RBP30.52■■■□□ 2.48
KCNQ2-201ENST00000344425 ZNF326Q5BKZ1 582 aaKnown RBP30.48■■■□□ 2.47
KCNQ2-201ENST00000344425 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.48■■■□□ 2.47
KCNQ2-201ENST00000344425 COL16A1Q07092 1604 aaPredicted RBP30.47■■■□□ 2.47
KCNQ2-201ENST00000344425 SPATA31A6Q5VVP1 1343 aa30.47■■■□□ 2.47
KCNQ2-201ENST00000344425 PTPRUQ92729 1446 aa30.46■■■□□ 2.47
KCNQ2-201ENST00000344425 SPHKAPQ2M3C7 1700 aa30.42■■■□□ 2.46
KCNQ2-201ENST00000344425 AHDC1Q5TGY3 1603 aaPredicted RBP30.42■■■□□ 2.46
KCNQ2-201ENST00000344425 MEX3CQ5U5Q3 659 aaKnown RBP30.41■■■□□ 2.46
KCNQ2-201ENST00000344425 SETBP1Q9Y6X0 1596 aa30.41■■■□□ 2.46
KCNQ2-201ENST00000344425 DCCP43146 1447 aa30.41■■■□□ 2.46
KCNQ2-201ENST00000344425 BRINP3Q76B58 766 aa30.39■■■□□ 2.46
KCNQ2-201ENST00000344425 NRXN3Q9Y4C0 1643 aa30.36■■■□□ 2.45
KCNQ2-201ENST00000344425 ZNF772Q68DY9 489 aaPredicted RBP30.36■■■□□ 2.45
KCNQ2-201ENST00000344425 METP08581 1390 aa30.35■■■□□ 2.45
KCNQ2-201ENST00000344425 XRN1Q8IZH2 1706 aaKnown RBP30.34■■■□□ 2.45
KCNQ2-201ENST00000344425 LRP6O75581 1613 aa30.34■■■□□ 2.45
KCNQ2-201ENST00000344425 RRBP1Q9P2E9 1410 aaKnown RBP30.32■■■□□ 2.44
KCNQ2-201ENST00000344425 SHPRHQ149N8 1683 aa30.31■■■□□ 2.44
KCNQ2-201ENST00000344425 MST1RQ04912 1400 aa30.29■■■□□ 2.44
KCNQ2-201ENST00000344425 NAIPQ13075 1403 aa30.29■■■□□ 2.44
KCNQ2-201ENST00000344425 CLTCL1P53675 1640 aa30.28■■■□□ 2.44
KCNQ2-201ENST00000344425 NEXMIFQ5QGS0 1516 aa30.27■■■□□ 2.44
KCNQ2-201ENST00000344425 ASXL1Q8IXJ9 1541 aa30.27■■■□□ 2.44
KCNQ2-201ENST00000344425 NUTM2BA6NNL0 878 aaPredicted RBP30.26■■■□□ 2.43
KCNQ2-201ENST00000344425 NUTM2EB1AL46 878 aaPredicted RBP30.26■■■□□ 2.43
KCNQ2-201ENST00000344425 NUTM2AQ8IVF1 878 aaPredicted RBP30.26■■■□□ 2.43
KCNQ2-201ENST00000344425 ADGRL3Q9HAR2 1447 aa30.25■■■□□ 2.43
KCNQ2-201ENST00000344425 VGFO15240 615 aaPredicted RBP30.25■■■□□ 2.43
KCNQ2-201ENST00000344425 LRRC59Q96AG4 307 aaKnown RBP30.25■■■□□ 2.43
KCNQ2-201ENST00000344425 SETD5Q9C0A6 1442 aa30.24■■■□□ 2.43
KCNQ2-201ENST00000344425 TRIM52Q96A61 297 aa30.24■■■□□ 2.43
KCNQ2-201ENST00000344425 KIF1BO60333 1816 aa30.22■■■□□ 2.43
KCNQ2-201ENST00000344425 SETD1AO15047 1707 aaKnown RBP30.21■■■□□ 2.43
KCNQ2-201ENST00000344425 RXRBP28702 533 aa30.2■■■□□ 2.42
KCNQ2-201ENST00000344425 RPGRIP1LQ68CZ1 1315 aa30.19■■■□□ 2.42
KCNQ2-201ENST00000344425 NHSL1Q5SYE7 1610 aa30.17■■■□□ 2.42
KCNQ2-201ENST00000344425 SLC4A1APQ9BWU0 796 aaKnown RBP30.17■■■□□ 2.42
KCNQ2-201ENST00000344425 HFM1A2PYH4 1435 aa30.16■■■□□ 2.42
KCNQ2-201ENST00000344425 AFF2P51816 1311 aa30.14■■■□□ 2.42
KCNQ2-201ENST00000344425 PTCH1Q13635 1447 aa30.14■■■□□ 2.42
KCNQ2-201ENST00000344425 DDX17Q92841 729 aaKnown RBP30.13■■■□□ 2.41
KCNQ2-201ENST00000344425 NALCNQ8IZF0 1738 aa30.13■■■□□ 2.41
KCNQ2-201ENST00000344425 C1orf167Q5SNV9 1468 aa30.12■■■□□ 2.41
KCNQ2-201ENST00000344425 UPF1Q92900 1129 aaKnown RBP eCLIP30.11■■■□□ 2.41
KCNQ2-201ENST00000344425 PNPLA6Q8IY17 1366 aa30.1■■■□□ 2.41
KCNQ2-201ENST00000344425 ROBO2Q9HCK4 1378 aa30.09■■■□□ 2.41
KCNQ2-201ENST00000344425 CDK12Q9NYV4 1490 aaPredicted RBP30.09■■■□□ 2.41
KCNQ2-201ENST00000344425 C8orf37Q96NL8 207 aa30.07■■■□□ 2.4
KCNQ2-201ENST00000344425 PRAG1Q86YV5 1406 aa30.05■■■□□ 2.4
KCNQ2-201ENST00000344425 ORAI2Q96SN7 254 aa30.04■■■□□ 2.4
KCNQ2-201ENST00000344425 QTRT2Q9H974 415 aaKnown RBP30.04■■■□□ 2.4
KCNQ2-201ENST00000344425 SOS2Q07890 1332 aaPredicted RBP30.01■■■□□ 2.4
KCNQ2-201ENST00000344425 RBM6P78332 1123 aaKnown RBP30■■■□□ 2.39
KCNQ2-201ENST00000344425 NGLY1Q96IV0 654 aa30■■■□□ 2.39
KCNQ2-201ENST00000344425 ADAMTS2O95450 1211 aa29.99■■■□□ 2.39
KCNQ2-201ENST00000344425 LAMC1P11047 1609 aa29.98■■■□□ 2.39
KCNQ2-201ENST00000344425 PPLO60437 1756 aa29.98■■■□□ 2.39
KCNQ2-201ENST00000344425 FOXD1Q16676 465 aa29.97■■■□□ 2.39
KCNQ2-201ENST00000344425 CCDC144AA2RUR9 1427 aa29.96■■■□□ 2.39
KCNQ2-201ENST00000344425 RGL3Q3MIN7 710 aa29.93■■■□□ 2.38
KCNQ2-201ENST00000344425 ADGRF5Q8IZF2 1346 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms