RNA–Protein interactions for RNA: ENST00000343137.8

PRDM2-203, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-203ENST00000343137 IFT140Q96RY7 1462 aa10.4□□□□□ -0.75
PRDM2-203ENST00000343137 AMPHP49418 695 aa10.39□□□□□ -0.75
PRDM2-203ENST00000343137 ARHGAP5Q13017 1502 aa10.39□□□□□ -0.75
PRDM2-203ENST00000343137 C9orf84Q5VXU9 1444 aa10.39□□□□□ -0.75
PRDM2-203ENST00000343137 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.39□□□□□ -0.75
PRDM2-203ENST00000343137 DDX49Q9Y6V7 483 aaKnown RBP10.39□□□□□ -0.75
PRDM2-203ENST00000343137 POLA1P09884 1462 aaPredicted RBP10.39□□□□□ -0.75
PRDM2-203ENST00000343137 PAK3O75914 559 aaPredicted RBP10.38□□□□□ -0.75
PRDM2-203ENST00000343137 PCF11O94913 1555 aaKnown RBP10.38□□□□□ -0.75
PRDM2-203ENST00000343137 NGDNQ8NEJ9 315 aaKnown RBP10.38□□□□□ -0.75
PRDM2-203ENST00000343137 MRC2Q9UBG0 1479 aa10.38□□□□□ -0.75
PRDM2-203ENST00000343137 NAIPQ13075 1403 aa10.38□□□□□ -0.75
PRDM2-203ENST00000343137 SLC4A3P48751 1232 aa10.38□□□□□ -0.75
PRDM2-203ENST00000343137 BCL2L13Q9BXK5 485 aa10.38□□□□□ -0.75
PRDM2-203ENST00000343137 ABCA10Q8WWZ4 1543 aa10.38□□□□□ -0.75
PRDM2-203ENST00000343137 GNAI1P63096 354 aa10.37□□□□□ -0.75
PRDM2-203ENST00000343137 PDE3AQ14432 1141 aa10.37□□□□□ -0.75
PRDM2-203ENST00000343137 PEG3Q9GZU2 1588 aa10.37□□□□□ -0.75
PRDM2-203ENST00000343137 NUCB2P80303 420 aa10.37□□□□□ -0.75
PRDM2-203ENST00000343137 RIPK4P57078 832 aa10.37□□□□□ -0.75
PRDM2-203ENST00000343137 PPP2R1AP30153 589 aa10.36□□□□□ -0.75
PRDM2-203ENST00000343137 FOXD4L1Q9NU39 408 aa10.36□□□□□ -0.75
PRDM2-203ENST00000343137 HSP90B1P14625 803 aaKnown RBP10.36□□□□□ -0.75
PRDM2-203ENST00000343137 PNISRQ8TF01 805 aaKnown RBP10.36□□□□□ -0.75
PRDM2-203ENST00000343137 ADAMTS8Q9UP79 889 aa10.36□□□□□ -0.75
PRDM2-203ENST00000343137 BIVM-ERCC5R4GMW8 1640 aa10.36□□□□□ -0.75
PRDM2-203ENST00000343137 NUTM2DQ5VT03 806 aaPredicted RBP10.36□□□□□ -0.75
PRDM2-203ENST00000343137 RUFY2Q8WXA3 655 aa10.36□□□□□ -0.75
PRDM2-203ENST00000343137 CC2D2AQ9P2K1 1620 aa10.36□□□□□ -0.75
PRDM2-203ENST00000343137 INTS3Q68E01 1043 aaKnown RBP10.35□□□□□ -0.75
PRDM2-203ENST00000343137 CT47B1P0C2W7 299 aaPredicted RBP10.35□□□□□ -0.75
PRDM2-203ENST00000343137 NFKBIBQ15653 356 aa10.35□□□□□ -0.75
PRDM2-203ENST00000343137 C22orf23Q9BZE7 217 aa10.35□□□□□ -0.75
PRDM2-203ENST00000343137 PTPN23Q9H3S7 1636 aa10.35□□□□□ -0.75
PRDM2-203ENST00000343137 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.35□□□□□ -0.75
PRDM2-203ENST00000343137 NBPF8Q3BBV2 869 aa10.35□□□□□ -0.75
PRDM2-203ENST00000343137 EPRSP07814 1512 aaKnown RBP10.34□□□□□ -0.75
PRDM2-203ENST00000343137 NPHP1O15259 732 aa10.34□□□□□ -0.75
PRDM2-203ENST00000343137 HSP90AA2PQ14568 343 aaPredicted RBP10.34□□□□□ -0.75
PRDM2-203ENST00000343137 ERBINQ96RT1 1412 aa10.34□□□□□ -0.75
PRDM2-203ENST00000343137 CSB-PGBD3P0DP91 1061 aa10.33□□□□□ -0.76
PRDM2-203ENST00000343137 GORABQ5T7V8 394 aa10.33□□□□□ -0.76
PRDM2-203ENST00000343137 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
PRDM2-203ENST00000343137 MINK1Q8N4C8 1332 aaPredicted RBP10.33□□□□□ -0.76
PRDM2-203ENST00000343137 TAOK2Q9UL54 1235 aa10.33□□□□□ -0.76
PRDM2-203ENST00000343137 RILPL2Q969X0 211 aa10.32□□□□□ -0.76
PRDM2-203ENST00000343137 AKNAQ7Z591 1439 aa10.32□□□□□ -0.76
PRDM2-203ENST00000343137 CDC45O75419 566 aa10.32□□□□□ -0.76
PRDM2-203ENST00000343137 BACH2Q9BYV9 841 aa10.32□□□□□ -0.76
PRDM2-203ENST00000343137 IQGAP2Q13576 1575 aa10.32□□□□□ -0.76
PRDM2-203ENST00000343137 MRE11P49959 708 aa10.31□□□□□ -0.76
PRDM2-203ENST00000343137 LRRFIP1Q32MZ4 808 aaKnown RBP10.31□□□□□ -0.76
PRDM2-203ENST00000343137 HSP90AB4PQ58FF6 505 aa10.31□□□□□ -0.76
PRDM2-203ENST00000343137 DIAPH3Q9NSV4 1193 aa10.31□□□□□ -0.76
PRDM2-203ENST00000343137 KIAA0586Q9BVV6 1533 aa10.31□□□□□ -0.76
PRDM2-203ENST00000343137 NOL8Q76FK4 1167 aaKnown RBP10.31□□□□□ -0.76
PRDM2-203ENST00000343137 TAF7LQ5H9L4 462 aa10.3□□□□□ -0.76
PRDM2-203ENST00000343137 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.3□□□□□ -0.76
PRDM2-203ENST00000343137 WDR63Q8IWG1 891 aa10.3□□□□□ -0.76
PRDM2-203ENST00000343137 PANK1Q8TE04 598 aa10.3□□□□□ -0.76
PRDM2-203ENST00000343137 ELL2O00472 640 aaPredicted RBP10.3□□□□□ -0.76
PRDM2-203ENST00000343137 ZKSCAN1P17029 563 aaPredicted RBP10.3□□□□□ -0.76
PRDM2-203ENST00000343137 CDCA7LQ96GN5 454 aa10.3□□□□□ -0.76
PRDM2-203ENST00000343137 H3BQV1 296 aa10.29□□□□□ -0.76
PRDM2-203ENST00000343137 IFFO2Q5TF58 517 aa10.29□□□□□ -0.76
PRDM2-203ENST00000343137 PRG4Q92954 1404 aaPredicted RBP10.29□□□□□ -0.76
PRDM2-203ENST00000343137 C1orf141Q5JVX7 400 aa10.29□□□□□ -0.76
PRDM2-203ENST00000343137 ISY1Q9ULR0 285 aaKnown RBP10.29□□□□□ -0.76
PRDM2-203ENST00000343137 TCP11L2Q8N4U5 519 aa10.29□□□□□ -0.76
PRDM2-203ENST00000343137 ANKRD30BQ9BXX2 1392 aa10.29□□□□□ -0.76
PRDM2-203ENST00000343137 CCDC141Q6ZP82 1450 aa10.29□□□□□ -0.76
PRDM2-203ENST00000343137 GCC1Q96CN9 775 aa10.29□□□□□ -0.76
PRDM2-203ENST00000343137 CHMP3Q9Y3E7 222 aa10.29□□□□□ -0.76
PRDM2-203ENST00000343137 LAMC3Q9Y6N6 1575 aa10.28□□□□□ -0.76
PRDM2-203ENST00000343137 GOLGA6L19H0YKK7 550 aa10.28□□□□□ -0.76
PRDM2-203ENST00000343137 FAM184AQ8NB25 1140 aa10.28□□□□□ -0.76
PRDM2-203ENST00000343137 THOC2Q8NI27 1593 aaKnown RBP10.28□□□□□ -0.76
PRDM2-203ENST00000343137 SF3A1Q15459 793 aaKnown RBP10.28□□□□□ -0.76
PRDM2-203ENST00000343137 RNF20Q5VTR2 975 aa10.28□□□□□ -0.76
PRDM2-203ENST00000343137 MTHFSP49914 203 aa10.28□□□□□ -0.76
PRDM2-203ENST00000343137 BICRAQ9NZM4 1560 aa10.27□□□□□ -0.76
PRDM2-203ENST00000343137 TEFQ10587 303 aa10.27□□□□□ -0.76
PRDM2-203ENST00000343137 NCOA1Q15788 1441 aa10.27□□□□□ -0.77
PRDM2-203ENST00000343137 MCM2P49736 904 aa10.27□□□□□ -0.77
PRDM2-203ENST00000343137 NEXNQ0ZGT2 675 aa10.27□□□□□ -0.77
PRDM2-203ENST00000343137 LNPKQ9C0E8 428 aa10.27□□□□□ -0.77
PRDM2-203ENST00000343137 SNAPC4Q5SXM2 1469 aa10.27□□□□□ -0.77
PRDM2-203ENST00000343137 RPGRIP1LQ68CZ1 1315 aa10.27□□□□□ -0.77
PRDM2-203ENST00000343137 ERC2O15083 957 aa10.26□□□□□ -0.77
PRDM2-203ENST00000343137 DDX58O95786 925 aaKnown RBP10.26□□□□□ -0.77
PRDM2-203ENST00000343137 PDZRN3Q9UPQ7 1066 aa10.26□□□□□ -0.77
PRDM2-203ENST00000343137 NESP48681 1621 aa10.26□□□□□ -0.77
PRDM2-203ENST00000343137 FOXD4L5Q5VV16 416 aaPredicted RBP10.26□□□□□ -0.77
PRDM2-203ENST00000343137 FOXD4L4Q8WXT5 416 aaPredicted RBP10.26□□□□□ -0.77
PRDM2-203ENST00000343137 CAMSAP2Q08AD1 1489 aa10.26□□□□□ -0.77
PRDM2-203ENST00000343137 NBPF1Q3BBV0 1214 aa10.26□□□□□ -0.77
PRDM2-203ENST00000343137 CDK13Q14004 1512 aaKnown RBP10.26□□□□□ -0.77
PRDM2-203ENST00000343137 RABEP1Q15276 862 aa10.26□□□□□ -0.77
PRDM2-203ENST00000343137 IFIT2P09913 472 aaKnown RBP10.25□□□□□ -0.77
PRDM2-203ENST00000343137 LTV1Q96GA3 475 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms