RNA–Protein interactions for RNA: ENST00000342916.7

EGFR-202, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-202ENST00000342916 EIF4G2P78344 907 aaKnown RBP eCLIP26.73■■□□□ 1.87
EGFR-202ENST00000342916 PPLO60437 1756 aa26.72■■□□□ 1.87
EGFR-202ENST00000342916 NLRP1Q9C000 1473 aa26.72■■□□□ 1.87
EGFR-202ENST00000342916 SETD1BQ9UPS6 1966 aaKnown RBP26.71■■□□□ 1.87
EGFR-202ENST00000342916 DDX10Q13206 875 aaKnown RBP26.7■■□□□ 1.86
EGFR-202ENST00000342916 SENP3Q9H4L4 574 aaPredicted RBP26.69■■□□□ 1.86
EGFR-202ENST00000342916 NEXMIFQ5QGS0 1516 aa26.69■■□□□ 1.86
EGFR-202ENST00000342916 RALGAPBQ86X10 1494 aa26.68■■□□□ 1.86
EGFR-202ENST00000342916 CEP170BQ9Y4F5 1589 aaPredicted RBP26.68■■□□□ 1.86
EGFR-202ENST00000342916 KDM5AP29375 1690 aaKnown RBP26.65■■□□□ 1.86
EGFR-202ENST00000342916 ADGRF5Q8IZF2 1346 aa26.64■■□□□ 1.86
EGFR-202ENST00000342916 ZNF142P52746 1687 aaPredicted RBP26.64■■□□□ 1.85
EGFR-202ENST00000342916 PRAG1Q86YV5 1406 aa26.63■■□□□ 1.85
EGFR-202ENST00000342916 TRPM1Q7Z4N2 1603 aa26.6■■□□□ 1.85
EGFR-202ENST00000342916 WASHC2AQ641Q2 1341 aa26.59■■□□□ 1.85
EGFR-202ENST00000342916 RIMS2Q9UQ26 1411 aa26.59■■□□□ 1.85
EGFR-202ENST00000342916 MYOM2P54296 1465 aa26.59■■□□□ 1.85
EGFR-202ENST00000342916 ZFYVE9O95405 1425 aa26.58■■□□□ 1.85
EGFR-202ENST00000342916 RPGRIP1LQ68CZ1 1315 aa26.58■■□□□ 1.85
EGFR-202ENST00000342916 USP47Q96K76 1375 aa26.57■■□□□ 1.84
EGFR-202ENST00000342916 TMEM2Q9UHN6 1383 aa26.57■■□□□ 1.84
EGFR-202ENST00000342916 POLR1AO95602 1720 aaPredicted RBP26.57■■□□□ 1.84
EGFR-202ENST00000342916 C11orf95C9JLR9 678 aaPredicted RBP26.55■■□□□ 1.84
EGFR-202ENST00000342916 NRXN1Q9ULB1 1477 aa26.55■■□□□ 1.84
EGFR-202ENST00000342916 LTKP29376 864 aa26.53■■□□□ 1.84
EGFR-202ENST00000342916 THEMISQ8N1K5 641 aaPredicted RBP26.53■■□□□ 1.84
EGFR-202ENST00000342916 NBPF1Q3BBV0 1214 aa26.52■■□□□ 1.84
EGFR-202ENST00000342916 PIK3C2GO75747 1445 aa26.52■■□□□ 1.84
EGFR-202ENST00000342916 VGFO15240 615 aaPredicted RBP26.51■■□□□ 1.84
EGFR-202ENST00000342916 SLIT1O75093 1534 aa26.51■■□□□ 1.83
EGFR-202ENST00000342916 ARHGAP23Q9P227 1491 aa26.51■■□□□ 1.83
EGFR-202ENST00000342916 CARD11Q9BXL7 1154 aa26.5■■□□□ 1.83
EGFR-202ENST00000342916 CCDC7Q96M83 1385 aa26.5■■□□□ 1.83
EGFR-202ENST00000342916 CFAP70Q5T0N1 1121 aa26.5■■□□□ 1.83
EGFR-202ENST00000342916 ROCK2O75116 1388 aaKnown RBP26.49■■□□□ 1.83
EGFR-202ENST00000342916 TXNDC2Q86VQ3 553 aa26.48■■□□□ 1.83
EGFR-202ENST00000342916 STAC3Q96MF2 364 aa26.47■■□□□ 1.83
EGFR-202ENST00000342916 IQGAP1P46940 1657 aa26.46■■□□□ 1.83
EGFR-202ENST00000342916 NRXN3Q9Y4C0 1643 aa26.46■■□□□ 1.83
EGFR-202ENST00000342916 HSPA2P54652 639 aa26.46■■□□□ 1.83
EGFR-202ENST00000342916 LMTK3Q96Q04 1460 aa26.45■■□□□ 1.82
EGFR-202ENST00000342916 LAMC1P11047 1609 aa26.45■■□□□ 1.82
EGFR-202ENST00000342916 GPRASP1Q5JY77 1395 aa26.45■■□□□ 1.82
EGFR-202ENST00000342916 KIF7Q2M1P5 1343 aa26.43■■□□□ 1.82
EGFR-202ENST00000342916 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.43■■□□□ 1.82
EGFR-202ENST00000342916 KIAA1210Q9ULL0 1709 aa26.43■■□□□ 1.82
EGFR-202ENST00000342916 SCAF11Q99590 1463 aaKnown RBP26.42■■□□□ 1.82
EGFR-202ENST00000342916 EID1Q9Y6B2 187 aa26.42■■□□□ 1.82
EGFR-202ENST00000342916 YTHDC1Q96MU7 727 aaKnown RBP26.41■■□□□ 1.82
EGFR-202ENST00000342916 TMEM132EQ6IEE7 984 aa26.41■■□□□ 1.82
EGFR-202ENST00000342916 C14orf93Q9H972 538 aaKnown RBP26.41■■□□□ 1.82
EGFR-202ENST00000342916 ALKQ9UM73 1620 aa26.4■■□□□ 1.82
EGFR-202ENST00000342916 BCANQ96GW7 911 aa26.4■■□□□ 1.82
EGFR-202ENST00000342916 SETD1AO15047 1707 aaKnown RBP26.4■■□□□ 1.82
EGFR-202ENST00000342916 HDGFP51858 240 aaKnown RBP26.39■■□□□ 1.81
EGFR-202ENST00000342916 ASXL1Q8IXJ9 1541 aa26.38■■□□□ 1.81
EGFR-202ENST00000342916 SETBP1Q9Y6X0 1596 aa26.38■■□□□ 1.81
EGFR-202ENST00000342916 NCKAP5LQ9HCH0 1330 aa26.37■■□□□ 1.81
EGFR-202ENST00000342916 PLEKHG1Q9ULL1 1385 aa26.37■■□□□ 1.81
EGFR-202ENST00000342916 ST20-MTHFSA0A0A6YYL1 179 aa26.37■■□□□ 1.81
EGFR-202ENST00000342916 ANKLE2Q86XL3 938 aa26.37■■□□□ 1.81
EGFR-202ENST00000342916 ADGRB1O14514 1584 aa26.36■■□□□ 1.81
EGFR-202ENST00000342916 SLC26A8Q96RN1 970 aa26.35■■□□□ 1.81
EGFR-202ENST00000342916 ADAMTS13Q76LX8 1427 aa26.34■■□□□ 1.81
EGFR-202ENST00000342916 ANP32CO43423 234 aa26.34■■□□□ 1.81
EGFR-202ENST00000342916 METP08581 1390 aa26.31■■□□□ 1.8
EGFR-202ENST00000342916 STRCQ7RTU9 1775 aa26.28■■□□□ 1.8
EGFR-202ENST00000342916 CENPBP07199 599 aaPredicted RBP26.28■■□□□ 1.8
EGFR-202ENST00000342916 STK26Q9P289 416 aa26.28■■□□□ 1.8
EGFR-202ENST00000342916 MED14O60244 1454 aa26.27■■□□□ 1.8
EGFR-202ENST00000342916 TRAK1Q9UPV9 953 aa26.26■■□□□ 1.79
EGFR-202ENST00000342916 NPHP4O75161 1426 aaPredicted RBP26.26■■□□□ 1.79
EGFR-202ENST00000342916 YTHDC2Q9H6S0 1430 aaKnown RBP26.23■■□□□ 1.79
EGFR-202ENST00000342916 CCER2I3L3R5 266 aa26.23■■□□□ 1.79
EGFR-202ENST00000342916 ARHGEF28Q8N1W1 1705 aaKnown RBP26.22■■□□□ 1.79
EGFR-202ENST00000342916 POLR3GLQ9BT43 218 aa26.21■■□□□ 1.79
EGFR-202ENST00000342916 PTPRUQ92729 1446 aa26.2■■□□□ 1.78
EGFR-202ENST00000342916 TESK2Q96S53 571 aa26.2■■□□□ 1.78
EGFR-202ENST00000342916 DIP2AQ14689 1571 aa26.19■■□□□ 1.78
EGFR-202ENST00000342916 TBX22Q9Y458 520 aa26.19■■□□□ 1.78
EGFR-202ENST00000342916 LRPPRCP42704 1394 aaKnown RBP26.15■■□□□ 1.78
EGFR-202ENST00000342916 SAFB2Q14151 953 aaKnown RBP eCLIP26.15■■□□□ 1.78
EGFR-202ENST00000342916 DISP3Q9P2K9 1392 aa26.14■■□□□ 1.78
EGFR-202ENST00000342916 CHD2O14647 1828 aaKnown RBP26.13■■□□□ 1.77
EGFR-202ENST00000342916 QRICH2Q9H0J4 1663 aa26.13■■□□□ 1.77
EGFR-202ENST00000342916 KNDC1Q76NI1 1749 aa26.12■■□□□ 1.77
EGFR-202ENST00000342916 WAPLQ7Z5K2 1190 aa26.12■■□□□ 1.77
EGFR-202ENST00000342916 PRKRIP1Q9H875 184 aaPredicted RBP26.11■■□□□ 1.77
EGFR-202ENST00000342916 AMOTL2Q9Y2J4 779 aa26.11■■□□□ 1.77
EGFR-202ENST00000342916 PLEKHH1Q9ULM0 1364 aa26.11■■□□□ 1.77
EGFR-202ENST00000342916 PRAM1Q96QH2 718 aa26.11■■□□□ 1.77
EGFR-202ENST00000342916 EIF3AQ14152 1382 aaKnown RBP26.11■■□□□ 1.77
EGFR-202ENST00000342916 ABCC11Q96J66 1382 aa26.1■■□□□ 1.77
EGFR-202ENST00000342916 ROBO2Q9HCK4 1378 aa26.1■■□□□ 1.77
EGFR-202ENST00000342916 XRN1Q8IZH2 1706 aaKnown RBP26.1■■□□□ 1.77
EGFR-202ENST00000342916 CENPJQ9HC77 1338 aaPredicted RBP26.09■■□□□ 1.77
EGFR-202ENST00000342916 AEBP2Q6ZN18 517 aaPredicted RBP26.08■■□□□ 1.77
EGFR-202ENST00000342916 CPS1P31327 1500 aa26.08■■□□□ 1.77
EGFR-202ENST00000342916 KCNA6P17658 529 aa26.07■■□□□ 1.76
EGFR-202ENST00000342916 TECPR2O15040 1411 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms