RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 EID1Q9Y6B2 187 aa32.16■■■□□ 2.74
RBM38-201ENST00000342690 NPHP4O75161 1426 aaPredicted RBP32.15■■■□□ 2.74
RBM38-201ENST00000342690 DMRT2Q9Y5R5 561 aa32.14■■■□□ 2.74
RBM38-201ENST00000342690 IQGAP1P46940 1657 aa32.14■■■□□ 2.74
RBM38-201ENST00000342690 ZNF326Q5BKZ1 582 aaKnown RBP32.13■■■□□ 2.73
RBM38-201ENST00000342690 SPATA31E1Q6ZUB1 1445 aa32.13■■■□□ 2.73
RBM38-201ENST00000342690 NEXMIFQ5QGS0 1516 aa32.12■■■□□ 2.73
RBM38-201ENST00000342690 NUTM2DQ5VT03 806 aaPredicted RBP32.07■■■□□ 2.72
RBM38-201ENST00000342690 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.07■■■□□ 2.72
RBM38-201ENST00000342690 HDGFP51858 240 aaKnown RBP32.06■■■□□ 2.72
RBM38-201ENST00000342690 PPLO60437 1756 aa32.05■■■□□ 2.72
RBM38-201ENST00000342690 PPP1R15AO75807 674 aaPredicted RBP32.05■■■□□ 2.72
RBM38-201ENST00000342690 PLEKHG1Q9ULL1 1385 aa32.04■■■□□ 2.72
RBM38-201ENST00000342690 RGL3Q3MIN7 710 aa32.02■■■□□ 2.72
RBM38-201ENST00000342690 IFT172Q9UG01 1749 aa32.02■■■□□ 2.72
RBM38-201ENST00000342690 RPGRIP1LQ68CZ1 1315 aa32■■■□□ 2.71
RBM38-201ENST00000342690 SENP3Q9H4L4 574 aaPredicted RBP31.98■■■□□ 2.71
RBM38-201ENST00000342690 NRXN3Q9Y4C0 1643 aa31.95■■■□□ 2.71
RBM38-201ENST00000342690 CCER1Q8TC90 406 aaPredicted RBP31.93■■■□□ 2.7
RBM38-201ENST00000342690 BCANQ96GW7 911 aa31.93■■■□□ 2.7
RBM38-201ENST00000342690 SETBP1Q9Y6X0 1596 aa31.93■■■□□ 2.7
RBM38-201ENST00000342690 ADAMTS13Q76LX8 1427 aa31.92■■■□□ 2.7
RBM38-201ENST00000342690 VGFO15240 615 aaPredicted RBP31.91■■■□□ 2.7
RBM38-201ENST00000342690 SLC26A8Q96RN1 970 aa31.91■■■□□ 2.7
RBM38-201ENST00000342690 SIN3AQ96ST3 1273 aa31.91■■■□□ 2.7
RBM38-201ENST00000342690 ZNF335Q9H4Z2 1342 aaPredicted RBP31.9■■■□□ 2.7
RBM38-201ENST00000342690 DIP2AQ14689 1571 aa31.9■■■□□ 2.7
RBM38-201ENST00000342690 MYOM2P54296 1465 aa31.87■■■□□ 2.69
RBM38-201ENST00000342690 CLSPNQ9HAW4 1339 aa31.87■■■□□ 2.69
RBM38-201ENST00000342690 LTBP4Q8N2S1 1624 aa31.86■■■□□ 2.69
RBM38-201ENST00000342690 ADGRF5Q8IZF2 1346 aa31.86■■■□□ 2.69
RBM38-201ENST00000342690 STRCP1A6NGW2 1772 aa31.84■■■□□ 2.69
RBM38-201ENST00000342690 TBX22Q9Y458 520 aa31.83■■■□□ 2.69
RBM38-201ENST00000342690 NEUROD1Q13562 356 aa31.82■■■□□ 2.68
RBM38-201ENST00000342690 SETD1AO15047 1707 aaKnown RBP31.81■■■□□ 2.68
RBM38-201ENST00000342690 NRXN1Q9ULB1 1477 aa31.81■■■□□ 2.68
RBM38-201ENST00000342690 PIK3C2GO75747 1445 aa31.8■■■□□ 2.68
RBM38-201ENST00000342690 ALKQ9UM73 1620 aa31.79■■■□□ 2.68
RBM38-201ENST00000342690 NWD1Q149M9 1564 aa31.78■■■□□ 2.68
RBM38-201ENST00000342690 DCAF11Q8TEB1 546 aa31.78■■■□□ 2.68
RBM38-201ENST00000342690 CHD2O14647 1828 aaKnown RBP31.77■■■□□ 2.68
RBM38-201ENST00000342690 CPS1P31327 1500 aa31.76■■■□□ 2.68
RBM38-201ENST00000342690 KDM2AQ9Y2K7 1162 aa31.75■■■□□ 2.67
RBM38-201ENST00000342690 PIK3R4Q99570 1358 aa31.74■■■□□ 2.67
RBM38-201ENST00000342690 METP08581 1390 aa31.73■■■□□ 2.67
RBM38-201ENST00000342690 KCNA6P17658 529 aa31.72■■■□□ 2.67
RBM38-201ENST00000342690 PTPRUQ92729 1446 aa31.72■■■□□ 2.67
RBM38-201ENST00000342690 STAC3Q96MF2 364 aa31.71■■■□□ 2.67
RBM38-201ENST00000342690 L3MBTL2Q969R5 705 aa31.7■■■□□ 2.67
RBM38-201ENST00000342690 LAMC1P11047 1609 aa31.69■■■□□ 2.66
RBM38-201ENST00000342690 XRN1Q8IZH2 1706 aaKnown RBP31.68■■■□□ 2.66
RBM38-201ENST00000342690 NKTRP30414 1462 aaKnown RBP31.67■■■□□ 2.66
RBM38-201ENST00000342690 ASXL1Q8IXJ9 1541 aa31.67■■■□□ 2.66
RBM38-201ENST00000342690 TONSLQ96HA7 1378 aa31.66■■■□□ 2.66
RBM38-201ENST00000342690 LRRC7Q96NW7 1537 aa31.65■■■□□ 2.66
RBM38-201ENST00000342690 CERKQ8TCT0 537 aa31.65■■■□□ 2.66
RBM38-201ENST00000342690 C14orf93Q9H972 538 aaKnown RBP31.64■■■□□ 2.66
RBM38-201ENST00000342690 CFAP70Q5T0N1 1121 aa31.63■■■□□ 2.65
RBM38-201ENST00000342690 PRAG1Q86YV5 1406 aa31.62■■■□□ 2.65
RBM38-201ENST00000342690 AMOTL2Q9Y2J4 779 aa31.62■■■□□ 2.65
RBM38-201ENST00000342690 XIRP1Q702N8 1843 aaKnown RBP31.6■■■□□ 2.65
RBM38-201ENST00000342690 IQSEC2Q5JU85 1478 aa31.59■■■□□ 2.65
RBM38-201ENST00000342690 ADGRB1O14514 1584 aa31.56■■■□□ 2.64
RBM38-201ENST00000342690 TMEM132EQ6IEE7 984 aa31.56■■■□□ 2.64
RBM38-201ENST00000342690 KIAA1210Q9ULL0 1709 aa31.55■■■□□ 2.64
RBM38-201ENST00000342690 PROSER2Q86WR7 435 aaPredicted RBP31.55■■■□□ 2.64
RBM38-201ENST00000342690 TMEM94Q12767 1356 aa31.55■■■□□ 2.64
RBM38-201ENST00000342690 KNDC1Q76NI1 1749 aa31.53■■■□□ 2.64
RBM38-201ENST00000342690 LRPPRCP42704 1394 aaKnown RBP31.53■■■□□ 2.64
RBM38-201ENST00000342690 YTHDC2Q9H6S0 1430 aaKnown RBP31.52■■■□□ 2.64
RBM38-201ENST00000342690 RBM33Q96EV2 1170 aaKnown RBP31.52■■■□□ 2.64
RBM38-201ENST00000342690 TIMELESSQ9UNS1 1208 aa31.52■■■□□ 2.64
RBM38-201ENST00000342690 PTCH1Q13635 1447 aa31.51■■■□□ 2.64
RBM38-201ENST00000342690 TECPR2O15040 1411 aa31.49■■■□□ 2.63
RBM38-201ENST00000342690 ROBO2Q9HCK4 1378 aa31.48■■■□□ 2.63
RBM38-201ENST00000342690 STK26Q9P289 416 aa31.48■■■□□ 2.63
RBM38-201ENST00000342690 TRPM1Q7Z4N2 1603 aa31.48■■■□□ 2.63
RBM38-201ENST00000342690 ABCC11Q96J66 1382 aa31.47■■■□□ 2.63
RBM38-201ENST00000342690 NBPF8Q3BBV2 869 aa31.45■■■□□ 2.63
RBM38-201ENST00000342690 NCOA3Q9Y6Q9 1424 aa31.44■■■□□ 2.62
RBM38-201ENST00000342690 NBPF1Q3BBV0 1214 aa31.42■■■□□ 2.62
RBM38-201ENST00000342690 DLC1Q96QB1 1528 aa31.4■■■□□ 2.62
RBM38-201ENST00000342690 NALCNQ8IZF0 1738 aa31.39■■■□□ 2.62
RBM38-201ENST00000342690 MSH6P52701 1360 aa31.37■■■□□ 2.61
RBM38-201ENST00000342690 PLEKHH1Q9ULM0 1364 aa31.37■■■□□ 2.61
RBM38-201ENST00000342690 FAM135BQ49AJ0 1406 aa31.37■■■□□ 2.61
RBM38-201ENST00000342690 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.36■■■□□ 2.61
RBM38-201ENST00000342690 C14orf37Q86TY3 774 aa31.36■■■□□ 2.61
RBM38-201ENST00000342690 TRAK1Q9UPV9 953 aa31.36■■■□□ 2.61
RBM38-201ENST00000342690 ARHGEF28Q8N1W1 1705 aaKnown RBP31.35■■■□□ 2.61
RBM38-201ENST00000342690 ADGRL3Q9HAR2 1447 aa31.35■■■□□ 2.61
RBM38-201ENST00000342690 WAPLQ7Z5K2 1190 aa31.35■■■□□ 2.61
RBM38-201ENST00000342690 RALGAPBQ86X10 1494 aa31.34■■■□□ 2.61
RBM38-201ENST00000342690 SIRT1Q96EB6 747 aa31.34■■■□□ 2.61
RBM38-201ENST00000342690 ROCK2O75116 1388 aaKnown RBP31.33■■■□□ 2.61
RBM38-201ENST00000342690 UBAP1LF5GYI3 381 aa31.33■■■□□ 2.61
RBM38-201ENST00000342690 PRAM1Q96QH2 718 aa31.3■■■□□ 2.6
RBM38-201ENST00000342690 C19orf44Q9H6X5 657 aa31.3■■■□□ 2.6
RBM38-201ENST00000342690 GPRASP1Q5JY77 1395 aa31.3■■■□□ 2.6
RBM38-201ENST00000342690 FBXO41Q8TF61 875 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms