RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 PPLO60437 1756 aa29.68■■■□□ 2.34
SNX21-201ENST00000342644 MYOM2P54296 1465 aa29.66■■■□□ 2.34
SNX21-201ENST00000342644 THEMISQ8N1K5 641 aaPredicted RBP29.66■■■□□ 2.34
SNX21-201ENST00000342644 ZFYVE9O95405 1425 aa29.65■■■□□ 2.34
SNX21-201ENST00000342644 TMEM2Q9UHN6 1383 aa29.63■■■□□ 2.33
SNX21-201ENST00000342644 SLIT1O75093 1534 aa29.62■■■□□ 2.33
SNX21-201ENST00000342644 ARHGAP23Q9P227 1491 aa29.62■■■□□ 2.33
SNX21-201ENST00000342644 VGFO15240 615 aaPredicted RBP29.61■■■□□ 2.33
SNX21-201ENST00000342644 KDM2AQ9Y2K7 1162 aa29.61■■■□□ 2.33
SNX21-201ENST00000342644 RIMS2Q9UQ26 1411 aa29.6■■■□□ 2.33
SNX21-201ENST00000342644 HDGFP51858 240 aaKnown RBP29.6■■■□□ 2.33
SNX21-201ENST00000342644 NRXN1Q9ULB1 1477 aa29.59■■■□□ 2.33
SNX21-201ENST00000342644 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.59■■■□□ 2.33
SNX21-201ENST00000342644 PRAG1Q86YV5 1406 aa29.59■■■□□ 2.33
SNX21-201ENST00000342644 NBPF8Q3BBV2 869 aa29.55■■■□□ 2.32
SNX21-201ENST00000342644 ADGRF5Q8IZF2 1346 aa29.53■■■□□ 2.32
SNX21-201ENST00000342644 PIK3C2GO75747 1445 aa29.51■■■□□ 2.31
SNX21-201ENST00000342644 EID1Q9Y6B2 187 aa29.5■■■□□ 2.31
SNX21-201ENST00000342644 LMTK3Q96Q04 1460 aa29.49■■■□□ 2.31
SNX21-201ENST00000342644 KIAA1210Q9ULL0 1709 aa29.48■■■□□ 2.31
SNX21-201ENST00000342644 LTKP29376 864 aa29.47■■■□□ 2.31
SNX21-201ENST00000342644 NUTM2DQ5VT03 806 aaPredicted RBP29.47■■■□□ 2.31
SNX21-201ENST00000342644 TXNDC2Q86VQ3 553 aa29.47■■■□□ 2.31
SNX21-201ENST00000342644 TRPM1Q7Z4N2 1603 aa29.46■■■□□ 2.31
SNX21-201ENST00000342644 RALGAPBQ86X10 1494 aa29.46■■■□□ 2.31
SNX21-201ENST00000342644 SCAF11Q99590 1463 aaKnown RBP29.46■■■□□ 2.31
SNX21-201ENST00000342644 ANKLE2Q86XL3 938 aa29.44■■■□□ 2.3
SNX21-201ENST00000342644 PLEKHG1Q9ULL1 1385 aa29.44■■■□□ 2.3
SNX21-201ENST00000342644 SETBP1Q9Y6X0 1596 aa29.43■■■□□ 2.3
SNX21-201ENST00000342644 C14orf93Q9H972 538 aaKnown RBP29.42■■■□□ 2.3
SNX21-201ENST00000342644 LAMC1P11047 1609 aa29.41■■■□□ 2.3
SNX21-201ENST00000342644 GPRASP1Q5JY77 1395 aa29.39■■■□□ 2.3
SNX21-201ENST00000342644 NRXN3Q9Y4C0 1643 aa29.39■■■□□ 2.3
SNX21-201ENST00000342644 POLR1AO95602 1720 aaPredicted RBP29.37■■■□□ 2.29
SNX21-201ENST00000342644 CFAP70Q5T0N1 1121 aa29.37■■■□□ 2.29
SNX21-201ENST00000342644 MED14O60244 1454 aa29.37■■■□□ 2.29
SNX21-201ENST00000342644 ALKQ9UM73 1620 aa29.36■■■□□ 2.29
SNX21-201ENST00000342644 ROCK2O75116 1388 aaKnown RBP29.34■■■□□ 2.29
SNX21-201ENST00000342644 IQGAP1P46940 1657 aa29.34■■■□□ 2.29
SNX21-201ENST00000342644 NBPF1Q3BBV0 1214 aa29.34■■■□□ 2.29
SNX21-201ENST00000342644 SETD1AO15047 1707 aaKnown RBP29.33■■■□□ 2.29
SNX21-201ENST00000342644 ADAMTS13Q76LX8 1427 aa29.32■■■□□ 2.28
SNX21-201ENST00000342644 ADGRB1O14514 1584 aa29.31■■■□□ 2.28
SNX21-201ENST00000342644 HSPA2P54652 639 aa29.31■■■□□ 2.28
SNX21-201ENST00000342644 DIP2AQ14689 1571 aa29.31■■■□□ 2.28
SNX21-201ENST00000342644 TBX22Q9Y458 520 aa29.29■■■□□ 2.28
SNX21-201ENST00000342644 NPHP4O75161 1426 aaPredicted RBP29.28■■■□□ 2.28
SNX21-201ENST00000342644 CARD11Q9BXL7 1154 aa29.28■■■□□ 2.28
SNX21-201ENST00000342644 NCKAP5LQ9HCH0 1330 aa29.27■■■□□ 2.28
SNX21-201ENST00000342644 BCANQ96GW7 911 aa29.26■■■□□ 2.27
SNX21-201ENST00000342644 ASXL1Q8IXJ9 1541 aa29.26■■■□□ 2.27
SNX21-201ENST00000342644 STRCQ7RTU9 1775 aa29.24■■■□□ 2.27
SNX21-201ENST00000342644 TMEM132EQ6IEE7 984 aa29.21■■■□□ 2.27
SNX21-201ENST00000342644 SENP3Q9H4L4 574 aaPredicted RBP29.21■■■□□ 2.27
SNX21-201ENST00000342644 METP08581 1390 aa29.2■■■□□ 2.27
SNX21-201ENST00000342644 PIK3R4Q99570 1358 aa29.2■■■□□ 2.27
SNX21-201ENST00000342644 SLC26A8Q96RN1 970 aa29.2■■■□□ 2.27
SNX21-201ENST00000342644 EIF4G2P78344 907 aaKnown RBP eCLIP29.19■■■□□ 2.26
SNX21-201ENST00000342644 YTHDC2Q9H6S0 1430 aaKnown RBP29.18■■■□□ 2.26
SNX21-201ENST00000342644 USP47Q96K76 1375 aa29.18■■■□□ 2.26
SNX21-201ENST00000342644 LRPPRCP42704 1394 aaKnown RBP29.17■■■□□ 2.26
SNX21-201ENST00000342644 ABCC11Q96J66 1382 aa29.15■■■□□ 2.26
SNX21-201ENST00000342644 AEBP2Q6ZN18 517 aaPredicted RBP29.15■■■□□ 2.26
SNX21-201ENST00000342644 TECPR2O15040 1411 aa29.12■■■□□ 2.25
SNX21-201ENST00000342644 DLC1Q96QB1 1528 aa29.12■■■□□ 2.25
SNX21-201ENST00000342644 EIF3AQ14152 1382 aaKnown RBP29.12■■■□□ 2.25
SNX21-201ENST00000342644 KNDC1Q76NI1 1749 aa29.12■■■□□ 2.25
SNX21-201ENST00000342644 HSPA5P11021 654 aaKnown RBP29.1■■■□□ 2.25
SNX21-201ENST00000342644 CHD2O14647 1828 aaKnown RBP29.1■■■□□ 2.25
SNX21-201ENST00000342644 PTPRUQ92729 1446 aa29.1■■■□□ 2.25
SNX21-201ENST00000342644 SIRT1Q96EB6 747 aa29.1■■■□□ 2.25
SNX21-201ENST00000342644 TRAK1Q9UPV9 953 aa29.1■■■□□ 2.25
SNX21-201ENST00000342644 ARHGEF28Q8N1W1 1705 aaKnown RBP29.09■■■□□ 2.25
SNX21-201ENST00000342644 DMRT2Q9Y5R5 561 aa29.09■■■□□ 2.25
SNX21-201ENST00000342644 XRN1Q8IZH2 1706 aaKnown RBP29.07■■■□□ 2.24
SNX21-201ENST00000342644 CPS1P31327 1500 aa29.06■■■□□ 2.24
SNX21-201ENST00000342644 STK26Q9P289 416 aa29.06■■■□□ 2.24
SNX21-201ENST00000342644 ST20-MTHFSA0A0A6YYL1 179 aa29.05■■■□□ 2.24
SNX21-201ENST00000342644 FAM135BQ49AJ0 1406 aa29.05■■■□□ 2.24
SNX21-201ENST00000342644 AMOTL2Q9Y2J4 779 aa29.04■■■□□ 2.24
SNX21-201ENST00000342644 NWD1Q149M9 1564 aa29.03■■■□□ 2.24
SNX21-201ENST00000342644 PTCH1Q13635 1447 aa29.02■■■□□ 2.24
SNX21-201ENST00000342644 KCNA6P17658 529 aa29.02■■■□□ 2.24
SNX21-201ENST00000342644 CENPJQ9HC77 1338 aaPredicted RBP29.01■■■□□ 2.23
SNX21-201ENST00000342644 SBNO2Q9Y2G9 1366 aa29.01■■■□□ 2.23
SNX21-201ENST00000342644 SLC24A1O60721 1099 aa28.99■■■□□ 2.23
SNX21-201ENST00000342644 TESK2Q96S53 571 aa28.99■■■□□ 2.23
SNX21-201ENST00000342644 ROBO2Q9HCK4 1378 aa28.98■■■□□ 2.23
SNX21-201ENST00000342644 PRAM1Q96QH2 718 aa28.97■■■□□ 2.23
SNX21-201ENST00000342644 HIRIP3Q9BW71 556 aaPredicted RBP28.97■■■□□ 2.23
SNX21-201ENST00000342644 QRICH2Q9H0J4 1663 aa28.96■■■□□ 2.23
SNX21-201ENST00000342644 ZNF316A6NFI3 1004 aaPredicted RBP28.95■■■□□ 2.23
SNX21-201ENST00000342644 POGKQ9P215 609 aa28.95■■■□□ 2.23
SNX21-201ENST00000342644 NKTRP30414 1462 aaKnown RBP28.94■■■□□ 2.22
SNX21-201ENST00000342644 WAPLQ7Z5K2 1190 aa28.92■■■□□ 2.22
SNX21-201ENST00000342644 PLEKHH1Q9ULM0 1364 aa28.92■■■□□ 2.22
SNX21-201ENST00000342644 STRCP1A6NGW2 1772 aa28.89■■■□□ 2.22
SNX21-201ENST00000342644 TMF1P82094 1093 aa28.87■■■□□ 2.21
SNX21-201ENST00000342644 SAFB2Q14151 953 aaKnown RBP eCLIP28.84■■■□□ 2.21
SNX21-201ENST00000342644 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms