RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 REREQ9P2R6 1566 aa20.76■□□□□ 0.91
BRAT1-201ENST00000340611 POLR3GLQ9BT43 218 aa20.76■□□□□ 0.91
BRAT1-201ENST00000340611 ADGRF5Q8IZF2 1346 aa20.75■□□□□ 0.91
BRAT1-201ENST00000340611 CEBPAP49715 358 aaPredicted RBP20.75■□□□□ 0.91
BRAT1-201ENST00000340611 USP47Q96K76 1375 aa20.75■□□□□ 0.91
BRAT1-201ENST00000340611 NOS1P29475 1434 aa20.74■□□□□ 0.91
BRAT1-201ENST00000340611 ZC3H13Q5T200 1668 aaKnown RBP20.73■□□□□ 0.91
BRAT1-201ENST00000340611 WASHC2AQ641Q2 1341 aa20.72■□□□□ 0.91
BRAT1-201ENST00000340611 RALGAPBQ86X10 1494 aa20.72■□□□□ 0.91
BRAT1-201ENST00000340611 CNTLNQ9NXG0 1405 aa20.72■□□□□ 0.91
BRAT1-201ENST00000340611 PREX1Q8TCU6 1659 aa20.72■□□□□ 0.91
BRAT1-201ENST00000340611 ST20-MTHFSA0A0A6YYL1 179 aa20.71■□□□□ 0.91
BRAT1-201ENST00000340611 TRPM1Q7Z4N2 1603 aa20.71■□□□□ 0.91
BRAT1-201ENST00000340611 NBR1Q14596 966 aa20.7■□□□□ 0.9
BRAT1-201ENST00000340611 MYO5BQ9ULV0 1848 aa20.7■□□□□ 0.9
BRAT1-201ENST00000340611 CFAP70Q5T0N1 1121 aa20.7■□□□□ 0.9
BRAT1-201ENST00000340611 ARHGAP31Q2M1Z3 1444 aa20.69■□□□□ 0.9
BRAT1-201ENST00000340611 ZMYM3Q14202 1370 aa20.69■□□□□ 0.9
BRAT1-201ENST00000340611 NEFLP07196 543 aa20.69■□□□□ 0.9
BRAT1-201ENST00000340611 UBE2Q2Q8WVN8 375 aa20.67■□□□□ 0.9
BRAT1-201ENST00000340611 ERVK-7P63135 1459 aa20.67■□□□□ 0.9
BRAT1-201ENST00000340611 MADDQ8WXG6 1647 aa20.66■□□□□ 0.9
BRAT1-201ENST00000340611 ADGRB3O60242 1522 aa20.66■□□□□ 0.9
BRAT1-201ENST00000340611 STAG3Q9UJ98 1225 aa20.66■□□□□ 0.9
BRAT1-201ENST00000340611 PIK3C2BO00750 1634 aa20.64■□□□□ 0.89
BRAT1-201ENST00000340611 CNGB1Q14028 1251 aaPredicted RBP20.64■□□□□ 0.89
BRAT1-201ENST00000340611 KIF7Q2M1P5 1343 aa20.62■□□□□ 0.89
BRAT1-201ENST00000340611 TMEM132EQ6IEE7 984 aa20.62■□□□□ 0.89
BRAT1-201ENST00000340611 SLC52A1Q9NWF4 448 aa20.62■□□□□ 0.89
BRAT1-201ENST00000340611 PPP6R1Q9UPN7 881 aa20.62■□□□□ 0.89
BRAT1-201ENST00000340611 IL27Q8NEV9 243 aa20.61■□□□□ 0.89
BRAT1-201ENST00000340611 IFT172Q9UG01 1749 aa20.6■□□□□ 0.89
BRAT1-201ENST00000340611 CCDC7Q96M83 1385 aa20.59■□□□□ 0.89
BRAT1-201ENST00000340611 PPLO60437 1756 aa20.59■□□□□ 0.89
BRAT1-201ENST00000340611 TMEM131LA2VDJ0 1609 aa20.57■□□□□ 0.88
BRAT1-201ENST00000340611 GPRASP1Q5JY77 1395 aa20.55■□□□□ 0.88
BRAT1-201ENST00000340611 FANCIQ9NVI1 1328 aa20.55■□□□□ 0.88
BRAT1-201ENST00000340611 ANP32CO43423 234 aa20.55■□□□□ 0.88
BRAT1-201ENST00000340611 SPATA31D1Q6ZQQ2 1576 aa20.55■□□□□ 0.88
BRAT1-201ENST00000340611 NEXMIFQ5QGS0 1516 aa20.55■□□□□ 0.88
BRAT1-201ENST00000340611 FER1L4A9Z1Z3 1794 aa20.54■□□□□ 0.88
BRAT1-201ENST00000340611 MYOM2P54296 1465 aa20.53■□□□□ 0.88
BRAT1-201ENST00000340611 TRAK1Q9UPV9 953 aa20.53■□□□□ 0.88
BRAT1-201ENST00000340611 TNRQ92752 1358 aa20.52■□□□□ 0.87
BRAT1-201ENST00000340611 NEURL4Q96JN8 1562 aa20.52■□□□□ 0.87
BRAT1-201ENST00000340611 VGFO15240 615 aaPredicted RBP20.5■□□□□ 0.87
BRAT1-201ENST00000340611 TESK2Q96S53 571 aa20.5■□□□□ 0.87
BRAT1-201ENST00000340611 PIK3C2GO75747 1445 aa20.5■□□□□ 0.87
BRAT1-201ENST00000340611 STK26Q9P289 416 aa20.5■□□□□ 0.87
BRAT1-201ENST00000340611 C3P01024 1663 aa20.5■□□□□ 0.87
BRAT1-201ENST00000340611 DISP3Q9P2K9 1392 aa20.5■□□□□ 0.87
BRAT1-201ENST00000340611 A2ML1A8K2U0 1454 aa20.49■□□□□ 0.87
BRAT1-201ENST00000340611 RPGRIP1LQ68CZ1 1315 aa20.49■□□□□ 0.87
BRAT1-201ENST00000340611 CCER2I3L3R5 266 aa20.48■□□□□ 0.87
BRAT1-201ENST00000340611 NRXN1Q9ULB1 1477 aa20.48■□□□□ 0.87
BRAT1-201ENST00000340611 SAFB2Q14151 953 aaKnown RBP eCLIP20.48■□□□□ 0.87
BRAT1-201ENST00000340611 C14orf93Q9H972 538 aaKnown RBP20.48■□□□□ 0.87
BRAT1-201ENST00000340611 IRX6P78412 446 aaPredicted RBP20.47■□□□□ 0.87
BRAT1-201ENST00000340611 ERICH6BQ5W0A0 696 aa20.47■□□□□ 0.87
BRAT1-201ENST00000340611 EIF5BO60841 1220 aaKnown RBP20.47■□□□□ 0.87
BRAT1-201ENST00000340611 STAC3Q96MF2 364 aa20.47■□□□□ 0.87
BRAT1-201ENST00000340611 IQGAP1P46940 1657 aa20.46■□□□□ 0.87
BRAT1-201ENST00000340611 RIMS1Q86UR5 1692 aaKnown RBP20.45■□□□□ 0.86
BRAT1-201ENST00000340611 SCAF11Q99590 1463 aaKnown RBP20.44■□□□□ 0.86
BRAT1-201ENST00000340611 POLR1AO95602 1720 aaPredicted RBP20.44■□□□□ 0.86
BRAT1-201ENST00000340611 RIMS2Q9UQ26 1411 aa20.44■□□□□ 0.86
BRAT1-201ENST00000340611 LAMC1P11047 1609 aa20.43■□□□□ 0.86
BRAT1-201ENST00000340611 KIAA1210Q9ULL0 1709 aa20.41■□□□□ 0.86
BRAT1-201ENST00000340611 ADGRB1O14514 1584 aa20.4■□□□□ 0.86
BRAT1-201ENST00000340611 LTKP29376 864 aa20.39■□□□□ 0.85
BRAT1-201ENST00000340611 TMF1P82094 1093 aa20.38■□□□□ 0.85
BRAT1-201ENST00000340611 UBR1Q8IWV7 1749 aa20.38■□□□□ 0.85
BRAT1-201ENST00000340611 HNRNPUQ00839 825 aaKnown RBP eCLIP20.37■□□□□ 0.85
BRAT1-201ENST00000340611 ASXL1Q8IXJ9 1541 aa20.37■□□□□ 0.85
BRAT1-201ENST00000340611 ZFYVE9O95405 1425 aa20.35■□□□□ 0.85
BRAT1-201ENST00000340611 TMEM2Q9UHN6 1383 aa20.34■□□□□ 0.85
BRAT1-201ENST00000340611 CENPJQ9HC77 1338 aaPredicted RBP20.34■□□□□ 0.85
BRAT1-201ENST00000340611 PAK3O75914 559 aaPredicted RBP20.34■□□□□ 0.85
BRAT1-201ENST00000340611 ALKQ9UM73 1620 aa20.34■□□□□ 0.85
BRAT1-201ENST00000340611 CCDC184Q52MB2 194 aa20.33■□□□□ 0.85
BRAT1-201ENST00000340611 TXNDC2Q86VQ3 553 aa20.33■□□□□ 0.85
BRAT1-201ENST00000340611 SLC26A8Q96RN1 970 aa20.33■□□□□ 0.85
BRAT1-201ENST00000340611 EIF3AQ14152 1382 aaKnown RBP20.33■□□□□ 0.84
BRAT1-201ENST00000340611 PTPRMP28827 1452 aa20.32■□□□□ 0.84
BRAT1-201ENST00000340611 ADAMTSL3P82987 1691 aa20.32■□□□□ 0.84
BRAT1-201ENST00000340611 SETBP1Q9Y6X0 1596 aa20.32■□□□□ 0.84
BRAT1-201ENST00000340611 PKNOX2Q96KN3 472 aa20.32■□□□□ 0.84
BRAT1-201ENST00000340611 WAPLQ7Z5K2 1190 aa20.31■□□□□ 0.84
BRAT1-201ENST00000340611 PANK3Q9H999 370 aa20.3■□□□□ 0.84
BRAT1-201ENST00000340611 METP08581 1390 aa20.3■□□□□ 0.84
BRAT1-201ENST00000340611 PRAM1Q96QH2 718 aa20.3■□□□□ 0.84
BRAT1-201ENST00000340611 MINK1Q8N4C8 1332 aaPredicted RBP20.29■□□□□ 0.84
BRAT1-201ENST00000340611 RTL5Q5HYW3 569 aaPredicted RBP20.29■□□□□ 0.84
BRAT1-201ENST00000340611 NOP58Q9Y2X3 529 aaKnown RBP20.29■□□□□ 0.84
BRAT1-201ENST00000340611 PRKRIP1Q9H875 184 aaPredicted RBP20.29■□□□□ 0.84
BRAT1-201ENST00000340611 NLRP1Q9C000 1473 aa20.29■□□□□ 0.84
BRAT1-201ENST00000340611 MYO3AQ8NEV4 1616 aa20.28■□□□□ 0.84
BRAT1-201ENST00000340611 NRXN3Q9Y4C0 1643 aa20.28■□□□□ 0.84
BRAT1-201ENST00000340611 YTHDC2Q9H6S0 1430 aaKnown RBP20.28■□□□□ 0.84
BRAT1-201ENST00000340611 QRICH2Q9H0J4 1663 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms