RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 SLC26A8Q96RN1 970 aa24.62■■□□□ 1.53
MUC1-201ENST00000337604 TMEM94Q12767 1356 aa24.6■■□□□ 1.53
MUC1-201ENST00000337604 KCNA6P17658 529 aa24.58■■□□□ 1.53
MUC1-201ENST00000337604 SENP3Q9H4L4 574 aaPredicted RBP24.58■■□□□ 1.53
MUC1-201ENST00000337604 NKTRP30414 1462 aaKnown RBP24.58■■□□□ 1.52
MUC1-201ENST00000337604 PPARGC1BQ86YN6 1023 aaKnown RBP24.57■■□□□ 1.52
MUC1-201ENST00000337604 RIMS2Q9UQ26 1411 aa24.57■■□□□ 1.52
MUC1-201ENST00000337604 PLEKHG1Q9ULL1 1385 aa24.56■■□□□ 1.52
MUC1-201ENST00000337604 RBM33Q96EV2 1170 aaKnown RBP24.53■■□□□ 1.52
MUC1-201ENST00000337604 ITGAEP38570 1179 aa24.52■■□□□ 1.52
MUC1-201ENST00000337604 CHD2O14647 1828 aaKnown RBP24.51■■□□□ 1.51
MUC1-201ENST00000337604 NUP155O75694 1391 aa24.51■■□□□ 1.51
MUC1-201ENST00000337604 FAM135BQ49AJ0 1406 aa24.5■■□□□ 1.51
MUC1-201ENST00000337604 PROSER2Q86WR7 435 aaPredicted RBP24.49■■□□□ 1.51
MUC1-201ENST00000337604 ADAMTS13Q76LX8 1427 aa24.48■■□□□ 1.51
MUC1-201ENST00000337604 ROBO1Q9Y6N7 1651 aa24.48■■□□□ 1.51
MUC1-201ENST00000337604 PPP1R15AO75807 674 aaPredicted RBP24.47■■□□□ 1.51
MUC1-201ENST00000337604 BCANQ96GW7 911 aa24.47■■□□□ 1.51
MUC1-201ENST00000337604 CHGAP10645 457 aaKnown RBP24.45■■□□□ 1.5
MUC1-201ENST00000337604 RRBP1Q9P2E9 1410 aaKnown RBP24.44■■□□□ 1.5
MUC1-201ENST00000337604 SPHKAPQ2M3C7 1700 aa24.44■■□□□ 1.5
MUC1-201ENST00000337604 DIP2AQ14689 1571 aa24.44■■□□□ 1.5
MUC1-201ENST00000337604 NUTM2DQ5VT03 806 aaPredicted RBP24.43■■□□□ 1.5
MUC1-201ENST00000337604 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.42■■□□□ 1.5
MUC1-201ENST00000337604 MSH6P52701 1360 aa24.42■■□□□ 1.5
MUC1-201ENST00000337604 HDGFP51858 240 aaKnown RBP24.41■■□□□ 1.5
MUC1-201ENST00000337604 PHF23Q9BUL5 403 aaPredicted RBP24.41■■□□□ 1.5
MUC1-201ENST00000337604 TBX22Q9Y458 520 aa24.41■■□□□ 1.5
MUC1-201ENST00000337604 NRXN3Q9Y4C0 1643 aa24.39■■□□□ 1.49
MUC1-201ENST00000337604 NAIPQ13075 1403 aa24.35■■□□□ 1.49
MUC1-201ENST00000337604 TRPM2O94759 1503 aa24.35■■□□□ 1.49
MUC1-201ENST00000337604 PIK3R4Q99570 1358 aa24.35■■□□□ 1.49
MUC1-201ENST00000337604 CLTCL1P53675 1640 aa24.35■■□□□ 1.49
MUC1-201ENST00000337604 PTPRUQ92729 1446 aa24.35■■□□□ 1.49
MUC1-201ENST00000337604 NCOA3Q9Y6Q9 1424 aa24.34■■□□□ 1.49
MUC1-201ENST00000337604 SETBP1Q9Y6X0 1596 aa24.33■■□□□ 1.49
MUC1-201ENST00000337604 RGS17Q9UGC6 210 aaPredicted RBP24.33■■□□□ 1.49
MUC1-201ENST00000337604 SLAIN2Q9P270 581 aa24.32■■□□□ 1.48
MUC1-201ENST00000337604 PHLPP1O60346 1717 aa24.32■■□□□ 1.48
MUC1-201ENST00000337604 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.32■■□□□ 1.48
MUC1-201ENST00000337604 XRN1Q8IZH2 1706 aaKnown RBP24.31■■□□□ 1.48
MUC1-201ENST00000337604 COL16A1Q07092 1604 aaPredicted RBP24.29■■□□□ 1.48
MUC1-201ENST00000337604 NEXMIFQ5QGS0 1516 aa24.29■■□□□ 1.48
MUC1-201ENST00000337604 HFM1A2PYH4 1435 aa24.26■■□□□ 1.47
MUC1-201ENST00000337604 AMOTL2Q9Y2J4 779 aa24.25■■□□□ 1.47
MUC1-201ENST00000337604 C14orf37Q86TY3 774 aa24.23■■□□□ 1.47
MUC1-201ENST00000337604 AHDC1Q5TGY3 1603 aaPredicted RBP24.22■■□□□ 1.47
MUC1-201ENST00000337604 METP08581 1390 aa24.22■■□□□ 1.47
MUC1-201ENST00000337604 ZNF326Q5BKZ1 582 aaKnown RBP24.22■■□□□ 1.47
MUC1-201ENST00000337604 C19orf44Q9H6X5 657 aa24.22■■□□□ 1.47
MUC1-201ENST00000337604 KIF1BO60333 1816 aa24.21■■□□□ 1.47
MUC1-201ENST00000337604 JCADQ9P266 1359 aa24.2■■□□□ 1.46
MUC1-201ENST00000337604 DCCP43146 1447 aa24.19■■□□□ 1.46
MUC1-201ENST00000337604 CADPS2Q86UW7 1296 aa24.19■■□□□ 1.46
MUC1-201ENST00000337604 POTEAQ6S8J7 498 aa24.17■■□□□ 1.46
MUC1-201ENST00000337604 SETD1AO15047 1707 aaKnown RBP24.16■■□□□ 1.46
MUC1-201ENST00000337604 ATF3P18847 181 aa24.16■■□□□ 1.46
MUC1-201ENST00000337604 LRP6O75581 1613 aa24.16■■□□□ 1.46
MUC1-201ENST00000337604 NALCNQ8IZF0 1738 aa24.14■■□□□ 1.45
MUC1-201ENST00000337604 MST1RQ04912 1400 aa24.13■■□□□ 1.45
MUC1-201ENST00000337604 BRINP3Q76B58 766 aa24.13■■□□□ 1.45
MUC1-201ENST00000337604 TRIM52Q96A61 297 aa24.13■■□□□ 1.45
MUC1-201ENST00000337604 SHPRHQ149N8 1683 aa24.13■■□□□ 1.45
MUC1-201ENST00000337604 ASXL1Q8IXJ9 1541 aa24.13■■□□□ 1.45
MUC1-201ENST00000337604 ADGRL3Q9HAR2 1447 aa24.12■■□□□ 1.45
MUC1-201ENST00000337604 PPLO60437 1756 aa24.09■■□□□ 1.45
MUC1-201ENST00000337604 SLC4A1APQ9BWU0 796 aaKnown RBP24.09■■□□□ 1.45
MUC1-201ENST00000337604 NHSL1Q5SYE7 1610 aa24.09■■□□□ 1.45
MUC1-201ENST00000337604 PTCH1Q13635 1447 aa24.07■■□□□ 1.44
MUC1-201ENST00000337604 SPATA31A6Q5VVP1 1343 aa24.07■■□□□ 1.44
MUC1-201ENST00000337604 PRAG1Q86YV5 1406 aa24.05■■□□□ 1.44
MUC1-201ENST00000337604 FOXD1Q16676 465 aa24.04■■□□□ 1.44
MUC1-201ENST00000337604 ROBO2Q9HCK4 1378 aa24.03■■□□□ 1.44
MUC1-201ENST00000337604 VGFO15240 615 aaPredicted RBP24.02■■□□□ 1.44
MUC1-201ENST00000337604 SETD5Q9C0A6 1442 aa24.01■■□□□ 1.43
MUC1-201ENST00000337604 RPGRIP1LQ68CZ1 1315 aa24.01■■□□□ 1.43
MUC1-201ENST00000337604 DDX17Q92841 729 aaKnown RBP23.98■■□□□ 1.43
MUC1-201ENST00000337604 C1orf167Q5SNV9 1468 aa23.98■■□□□ 1.43
MUC1-201ENST00000337604 SPATA31E1Q6ZUB1 1445 aa23.97■■□□□ 1.43
MUC1-201ENST00000337604 IFT172Q9UG01 1749 aa23.97■■□□□ 1.43
MUC1-201ENST00000337604 LAMC1P11047 1609 aa23.96■■□□□ 1.43
MUC1-201ENST00000337604 CCDC144AA2RUR9 1427 aa23.96■■□□□ 1.43
MUC1-201ENST00000337604 MEX3CQ5U5Q3 659 aaKnown RBP23.95■■□□□ 1.42
MUC1-201ENST00000337604 ADGRF5Q8IZF2 1346 aa23.93■■□□□ 1.42
MUC1-201ENST00000337604 PNPLA6Q8IY17 1366 aa23.92■■□□□ 1.42
MUC1-201ENST00000337604 NUTM2BA6NNL0 878 aaPredicted RBP23.91■■□□□ 1.42
MUC1-201ENST00000337604 NUTM2EB1AL46 878 aaPredicted RBP23.91■■□□□ 1.42
MUC1-201ENST00000337604 NUTM2AQ8IVF1 878 aaPredicted RBP23.91■■□□□ 1.42
MUC1-201ENST00000337604 MPHOSPH9Q99550 1183 aa23.91■■□□□ 1.42
MUC1-201ENST00000337604 CDC42BPGQ6DT37 1551 aa23.9■■□□□ 1.42
MUC1-201ENST00000337604 ZNF772Q68DY9 489 aaPredicted RBP23.89■■□□□ 1.41
MUC1-201ENST00000337604 LRRC59Q96AG4 307 aaKnown RBP23.89■■□□□ 1.41
MUC1-201ENST00000337604 ORAI2Q96SN7 254 aa23.88■■□□□ 1.41
MUC1-201ENST00000337604 TECPR2O15040 1411 aa23.87■■□□□ 1.41
MUC1-201ENST00000337604 PIK3C2GO75747 1445 aa23.86■■□□□ 1.41
MUC1-201ENST00000337604 RGL3Q3MIN7 710 aa23.86■■□□□ 1.41
MUC1-201ENST00000337604 ANKRD30BQ9BXX2 1392 aa23.86■■□□□ 1.41
MUC1-201ENST00000337604 KNDC1Q76NI1 1749 aa23.85■■□□□ 1.41
MUC1-201ENST00000337604 AFF2P51816 1311 aa23.84■■□□□ 1.41
MUC1-201ENST00000337604 SOS2Q07890 1332 aaPredicted RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms