RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 HSP90AB4PQ58FF6 505 aa15.94■□□□□ 0.14
HLCS-201ENST00000336648 CHMP5Q9NZZ3 219 aa15.94■□□□□ 0.14
HLCS-201ENST00000336648 STAC3Q96MF2 364 aa15.93■□□□□ 0.14
HLCS-201ENST00000336648 TEFQ10587 303 aa15.93■□□□□ 0.14
HLCS-201ENST00000336648 WWC1Q8IX03 1113 aa15.93■□□□□ 0.14
HLCS-201ENST00000336648 CCDC191Q8NCU4 936 aa15.93■□□□□ 0.14
HLCS-201ENST00000336648 PANK3Q9H999 370 aa15.93■□□□□ 0.14
HLCS-201ENST00000336648 NUCB2P80303 420 aa15.93■□□□□ 0.14
HLCS-201ENST00000336648 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.93■□□□□ 0.14
HLCS-201ENST00000336648 DDX58O95786 925 aaKnown RBP15.92■□□□□ 0.14
HLCS-201ENST00000336648 ZNF592Q92610 1267 aa15.92■□□□□ 0.14
HLCS-201ENST00000336648 MAP7D2Q96T17 732 aa15.92■□□□□ 0.14
HLCS-201ENST00000336648 FAM13BQ9NYF5 915 aa15.92■□□□□ 0.14
HLCS-201ENST00000336648 CCDC88BA6NC98 1476 aa15.92■□□□□ 0.14
HLCS-201ENST00000336648 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.92■□□□□ 0.14
HLCS-201ENST00000336648 CWC15Q9P013 229 aaKnown RBP15.92■□□□□ 0.14
HLCS-201ENST00000336648 CPLX1O14810 134 aa15.91■□□□□ 0.14
HLCS-201ENST00000336648 RDXP35241 583 aaKnown RBP15.91■□□□□ 0.14
HLCS-201ENST00000336648 HNRNPMP52272 730 aaKnown RBP eCLIP15.91■□□□□ 0.148e-6■■■■□ 21.3
HLCS-201ENST00000336648 FANCIQ9NVI1 1328 aa15.91■□□□□ 0.14
HLCS-201ENST00000336648 TRDNQ13061 729 aa15.91■□□□□ 0.14
HLCS-201ENST00000336648 RUFY1Q96T51 708 aa15.91■□□□□ 0.14
HLCS-201ENST00000336648 TCEAL9Q9UHQ7 104 aa15.91■□□□□ 0.14
HLCS-201ENST00000336648 CECR2Q9BXF3 1484 aa15.91■□□□□ 0.14
HLCS-201ENST00000336648 TTC5Q8N0Z6 440 aa15.91■□□□□ 0.14
HLCS-201ENST00000336648 ARGLU1Q9NWB6 273 aaPredicted RBP15.91■□□□□ 0.14
HLCS-201ENST00000336648 MCTP1Q6DN14 999 aa15.9■□□□□ 0.14
HLCS-201ENST00000336648 IFIT2P09913 472 aaKnown RBP15.9■□□□□ 0.14
HLCS-201ENST00000336648 FOXD4L5Q5VV16 416 aaPredicted RBP15.89■□□□□ 0.14
HLCS-201ENST00000336648 FOXD4L4Q8WXT5 416 aaPredicted RBP15.89■□□□□ 0.14
HLCS-201ENST00000336648 PRKRIP1Q9H875 184 aaPredicted RBP15.89■□□□□ 0.13
HLCS-201ENST00000336648 TRAK1Q9UPV9 953 aa15.89■□□□□ 0.13
HLCS-201ENST00000336648 LTV1Q96GA3 475 aaPredicted RBP15.89■□□□□ 0.13
HLCS-201ENST00000336648 C9orf78Q9NZ63 289 aaPredicted RBP15.89■□□□□ 0.13
HLCS-201ENST00000336648 ST20-MTHFSA0A0A6YYL1 179 aa15.89■□□□□ 0.13
HLCS-201ENST00000336648 TRIM34Q9BYJ4 488 aa15.89■□□□□ 0.13
HLCS-201ENST00000336648 FBXO3Q9UK99 471 aa15.88■□□□□ 0.13
HLCS-201ENST00000336648 INTS3Q68E01 1043 aaKnown RBP15.88■□□□□ 0.13
HLCS-201ENST00000336648 PCMTD1Q96MG8 357 aaPredicted RBP15.88■□□□□ 0.13
HLCS-201ENST00000336648 DCTN1Q14203 1278 aa15.87■□□□□ 0.13
HLCS-201ENST00000336648 ANO2Q9NQ90 1003 aa15.87■□□□□ 0.13
HLCS-201ENST00000336648 CCDC66A2RUB6 948 aa15.87■□□□□ 0.13
HLCS-201ENST00000336648 DZIP1LQ8IYY4 767 aaKnown RBP15.87■□□□□ 0.13
HLCS-201ENST00000336648 CTDP1Q9Y5B0 961 aaPredicted RBP15.87■□□□□ 0.13
HLCS-201ENST00000336648 ERC2O15083 957 aa15.87■□□□□ 0.13
HLCS-201ENST00000336648 MTERF4Q7Z6M4 381 aaKnown RBP15.86■□□□□ 0.13
HLCS-201ENST00000336648 DIAPH1O60610 1272 aaKnown RBP15.86■□□□□ 0.13
HLCS-201ENST00000336648 CRBNQ96SW2 442 aa15.86■□□□□ 0.13
HLCS-201ENST00000336648 SAFBQ15424 915 aaKnown RBP eCLIP15.86■□□□□ 0.13
HLCS-201ENST00000336648 BICD2Q8TD16 824 aa15.86■□□□□ 0.13
HLCS-201ENST00000336648 RRP7AQ9Y3A4 280 aaKnown RBP15.86■□□□□ 0.13
HLCS-201ENST00000336648 TDRD9Q8NDG6 1382 aaKnown RBP15.86■□□□□ 0.13
HLCS-201ENST00000336648 ERICH2A1L162 156 aa15.85■□□□□ 0.13
HLCS-201ENST00000336648 PKNOX2Q96KN3 472 aa15.85■□□□□ 0.13
HLCS-201ENST00000336648 G3BP1Q13283 466 aaKnown RBP eCLIP15.85■□□□□ 0.13
HLCS-201ENST00000336648 SASS6Q6UVJ0 657 aa15.85■□□□□ 0.13
HLCS-201ENST00000336648 HOMER1Q86YM7 354 aa15.85■□□□□ 0.13
HLCS-201ENST00000336648 ANO8Q9HCE9 1232 aaPredicted RBP15.85■□□□□ 0.13
HLCS-201ENST00000336648 USP47Q96K76 1375 aa15.85■□□□□ 0.13
HLCS-201ENST00000336648 CCDC73Q6ZRK6 1079 aa15.84■□□□□ 0.13
HLCS-201ENST00000336648 H0YHG0 523 aa15.84■□□□□ 0.13
HLCS-201ENST00000336648 HSP90B2PQ58FF3 399 aa15.84■□□□□ 0.13
HLCS-201ENST00000336648 EXOC6Q8TAG9 804 aa15.84■□□□□ 0.13
HLCS-201ENST00000336648 SMC3Q9UQE7 1217 aa15.84■□□□□ 0.13
HLCS-201ENST00000336648 COG6Q9Y2V7 657 aa15.84■□□□□ 0.13
HLCS-201ENST00000336648 GNAI1P63096 354 aa15.83■□□□□ 0.12
HLCS-201ENST00000336648 NAT10Q9H0A0 1025 aaKnown RBP15.83■□□□□ 0.12
HLCS-201ENST00000336648 FHOD3Q2V2M9 1422 aa15.83■□□□□ 0.12
HLCS-201ENST00000336648 RUNDC1Q96C34 613 aa15.82■□□□□ 0.12
HLCS-201ENST00000336648 LETM1O95202 739 aaPredicted RBP15.81■□□□□ 0.12
HLCS-201ENST00000336648 ABCC8Q09428 1581 aa15.81■□□□□ 0.12
HLCS-201ENST00000336648 DHX57Q6P158 1386 aaKnown RBP15.81■□□□□ 0.12
HLCS-201ENST00000336648 EVA1CP58658 441 aa15.81■□□□□ 0.12
HLCS-201ENST00000336648 FAM43AQ8N2R8 423 aa15.8■□□□□ 0.12
HLCS-201ENST00000336648 MNS1Q8NEH6 495 aa15.8■□□□□ 0.12
HLCS-201ENST00000336648 ELL2O00472 640 aaPredicted RBP15.8■□□□□ 0.12
HLCS-201ENST00000336648 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.8■□□□□ 0.12
HLCS-201ENST00000336648 ERCC4Q92889 916 aaPredicted RBP15.8■□□□□ 0.12
HLCS-201ENST00000336648 DHX8Q14562 1220 aaKnown RBP15.79■□□□□ 0.12
HLCS-201ENST00000336648 NFXL1Q6ZNB6 911 aa15.79■□□□□ 0.12
HLCS-201ENST00000336648 BCL2L13Q9BXK5 485 aa15.79■□□□□ 0.12
HLCS-201ENST00000336648 BRMS1Q9HCU9 246 aa15.79■□□□□ 0.12
HLCS-201ENST00000336648 PODXL2Q9NZ53 605 aa15.79■□□□□ 0.12
HLCS-201ENST00000336648 APAF1O14727 1248 aa15.79■□□□□ 0.12
HLCS-201ENST00000336648 VPS37DQ86XT2 251 aa15.79■□□□□ 0.12
HLCS-201ENST00000336648 CCDC43Q96MW1 224 aaKnown RBP15.78■□□□□ 0.12
HLCS-201ENST00000336648 XBP1P17861 261 aa15.78■□□□□ 0.12
HLCS-201ENST00000336648 CCDC173Q0VFZ6 552 aa15.78■□□□□ 0.12
HLCS-201ENST00000336648 PSMA5P28066 241 aa15.78■□□□□ 0.12
HLCS-201ENST00000336648 NINLQ9Y2I6 1382 aa15.78■□□□□ 0.12
HLCS-201ENST00000336648 RIPK4P57078 832 aa15.78■□□□□ 0.12
HLCS-201ENST00000336648 CCDC39Q9UFE4 941 aa15.78■□□□□ 0.12
HLCS-201ENST00000336648 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
HLCS-201ENST00000336648 OLFM4Q6UX06 510 aa15.77■□□□□ 0.12
HLCS-201ENST00000336648 MYO6Q9UM54 1294 aa15.77■□□□□ 0.12
HLCS-201ENST00000336648 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.77■□□□□ 0.12
HLCS-201ENST00000336648 CCP110O43303 1012 aa15.77■□□□□ 0.11
HLCS-201ENST00000336648 JPH4Q96JJ6 628 aa15.77■□□□□ 0.11
HLCS-201ENST00000336648 NUTM2DQ5VT03 806 aaPredicted RBP15.77■□□□□ 0.11
HLCS-201ENST00000336648 RALYLQ86SE5 291 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms