RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 CFAP70Q5T0N1 1121 aa21.44■■□□□ 1.02
CDC42EP4-201ENST00000335793 DUSP27Q5VZP5 1158 aa21.43■■□□□ 1.02
CDC42EP4-201ENST00000335793 PPM1GO15355 546 aaPredicted RBP21.42■■□□□ 1.02
CDC42EP4-201ENST00000335793 AMER1Q5JTC6 1135 aaPredicted RBP21.42■■□□□ 1.02
CDC42EP4-201ENST00000335793 SLC24A1O60721 1099 aa21.41■■□□□ 1.02
CDC42EP4-201ENST00000335793 PLEKHH1Q9ULM0 1364 aa21.41■■□□□ 1.02
CDC42EP4-201ENST00000335793 CENPQQ7L2Z9 268 aaPredicted RBP21.41■■□□□ 1.02
CDC42EP4-201ENST00000335793 TRPM1Q7Z4N2 1603 aa21.4■■□□□ 1.02
CDC42EP4-201ENST00000335793 FRAT1Q92837 279 aaPredicted RBP21.4■■□□□ 1.02
CDC42EP4-201ENST00000335793 BCAR3O75815 825 aa21.39■■□□□ 1.01
CDC42EP4-201ENST00000335793 CDC42BPBQ9Y5S2 1711 aa21.39■■□□□ 1.01
CDC42EP4-201ENST00000335793 RSPH6AQ9H0K4 717 aa21.38■■□□□ 1.01
CDC42EP4-201ENST00000335793 KANK1Q14678 1352 aa21.37■■□□□ 1.01
CDC42EP4-201ENST00000335793 GSE1Q14687 1217 aa21.37■■□□□ 1.01
CDC42EP4-201ENST00000335793 TRAPPC8Q9Y2L5 1435 aa21.37■■□□□ 1.01
CDC42EP4-201ENST00000335793 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.37■■□□□ 1.01
CDC42EP4-201ENST00000335793 TTC37Q6PGP7 1564 aa21.36■■□□□ 1.01
CDC42EP4-201ENST00000335793 BLMP54132 1417 aaPredicted RBP21.36■■□□□ 1.01
CDC42EP4-201ENST00000335793 RRP7AQ9Y3A4 280 aaKnown RBP21.36■■□□□ 1.01
CDC42EP4-201ENST00000335793 PREX2Q70Z35 1606 aa21.35■■□□□ 1.01
CDC42EP4-201ENST00000335793 MAGI2Q86UL8 1455 aa21.35■■□□□ 1.01
CDC42EP4-201ENST00000335793 SLFN5Q08AF3 891 aa21.35■■□□□ 1.01
CDC42EP4-201ENST00000335793 TRAK1Q9UPV9 953 aa21.34■■□□□ 1.01
CDC42EP4-201ENST00000335793 EIF3AQ14152 1382 aaKnown RBP21.34■■□□□ 1.01
CDC42EP4-201ENST00000335793 ARXQ96QS3 562 aa21.34■■□□□ 1.01
CDC42EP4-201ENST00000335793 SPINK5Q9NQ38 1064 aaPredicted RBP21.34■■□□□ 1.01
CDC42EP4-201ENST00000335793 DUOX2Q9NRD8 1548 aa21.34■■□□□ 1.01
CDC42EP4-201ENST00000335793 FAM161AQ3B820 660 aa21.33■■□□□ 1.01
CDC42EP4-201ENST00000335793 MORC1Q86VD1 984 aa21.32■■□□□ 1
CDC42EP4-201ENST00000335793 PRDM15P57071 1507 aaPredicted RBP21.32■■□□□ 1
CDC42EP4-201ENST00000335793 PLCH2O75038 1416 aa21.31■■□□□ 1
CDC42EP4-201ENST00000335793 COG6Q9Y2V7 657 aa21.3■■□□□ 1
CDC42EP4-201ENST00000335793 E9PCH4 1651 aa21.3■■□□□ 1
CDC42EP4-201ENST00000335793 E9PSI1 815 aa21.29■■□□□ 1
CDC42EP4-201ENST00000335793 GGT6Q6P531 493 aa21.29■■□□□ 1
CDC42EP4-201ENST00000335793 ADGRF5Q8IZF2 1346 aa21.29■■□□□ 1
CDC42EP4-201ENST00000335793 NUTM2DQ5VT03 806 aaPredicted RBP21.28■■□□□ 1
CDC42EP4-201ENST00000335793 ZMYM4Q5VZL5 1548 aa21.28■■□□□ 1
CDC42EP4-201ENST00000335793 SCAF11Q99590 1463 aaKnown RBP21.28■■□□□ 1
CDC42EP4-201ENST00000335793 USP35Q9P2H5 1018 aa21.28■■□□□ 1
CDC42EP4-201ENST00000335793 EIF2AK4Q9P2K8 1649 aaKnown RBP21.28■■□□□ 1
CDC42EP4-201ENST00000335793 WDR7Q9Y4E6 1490 aa21.28■■□□□ 1
CDC42EP4-201ENST00000335793 PANK1Q8TE04 598 aa21.27■■□□□ 1
CDC42EP4-201ENST00000335793 BCL2L13Q9BXK5 485 aa21.27■■□□□ 1
CDC42EP4-201ENST00000335793 SCAPERQ9BY12 1400 aa21.26■□□□□ 0.99
CDC42EP4-201ENST00000335793 CENPJQ9HC77 1338 aaPredicted RBP21.26■□□□□ 0.99
CDC42EP4-201ENST00000335793 STAC3Q96MF2 364 aa21.26■□□□□ 0.99
CDC42EP4-201ENST00000335793 SAFB2Q14151 953 aaKnown RBP eCLIP21.25■□□□□ 0.99
CDC42EP4-201ENST00000335793 DMRT2Q9Y5R5 561 aa21.25■□□□□ 0.99
CDC42EP4-201ENST00000335793 TMEM132EQ6IEE7 984 aa21.25■□□□□ 0.99
CDC42EP4-201ENST00000335793 CLUAP1Q96AJ1 413 aa21.24■□□□□ 0.99
CDC42EP4-201ENST00000335793 CARD14Q9BXL6 1004 aa21.24■□□□□ 0.99
CDC42EP4-201ENST00000335793 KDM2BQ8NHM5 1336 aa21.24■□□□□ 0.99
CDC42EP4-201ENST00000335793 NAP1L5Q96NT1 182 aaPredicted RBP21.24■□□□□ 0.99
CDC42EP4-201ENST00000335793 SLC12A5Q9H2X9 1139 aa21.24■□□□□ 0.99
CDC42EP4-201ENST00000335793 NFKBIBQ15653 356 aa21.24■□□□□ 0.99
CDC42EP4-201ENST00000335793 UNC13BO14795 1591 aa21.23■□□□□ 0.99
CDC42EP4-201ENST00000335793 MAST1Q9Y2H9 1570 aa21.23■□□□□ 0.99
CDC42EP4-201ENST00000335793 NPM1P06748 294 aaKnown RBP eCLIP21.23■□□□□ 0.99
CDC42EP4-201ENST00000335793 ABCC2Q92887 1545 aa21.22■□□□□ 0.99
CDC42EP4-201ENST00000335793 ASXL1Q8IXJ9 1541 aa21.21■□□□□ 0.99
CDC42EP4-201ENST00000335793 IQGAP3Q86VI3 1631 aa21.21■□□□□ 0.99
CDC42EP4-201ENST00000335793 INSRP06213 1382 aa21.21■□□□□ 0.99
CDC42EP4-201ENST00000335793 ZNF521Q96K83 1311 aa21.2■□□□□ 0.98
CDC42EP4-201ENST00000335793 HSP90AA2PQ14568 343 aaPredicted RBP21.2■□□□□ 0.98
CDC42EP4-201ENST00000335793 C8orf34Q49A92 452 aa21.2■□□□□ 0.98
CDC42EP4-201ENST00000335793 MYO5CQ9NQX4 1742 aa21.2■□□□□ 0.98
CDC42EP4-201ENST00000335793 IGHDP01880 384 aa21.19■□□□□ 0.98
CDC42EP4-201ENST00000335793 WWC1Q8IX03 1113 aa21.19■□□□□ 0.98
CDC42EP4-201ENST00000335793 ATP10AO60312 1499 aa21.18■□□□□ 0.98
CDC42EP4-201ENST00000335793 CFAP53Q96M91 514 aa21.17■□□□□ 0.98
CDC42EP4-201ENST00000335793 U2AF1L5P0DN76 240 aaPredicted RBP21.17■□□□□ 0.98
CDC42EP4-201ENST00000335793 U2AF1Q01081 240 aaKnown RBP eCLIP21.17■□□□□ 0.98
CDC42EP4-201ENST00000335793 TCP11L2Q8N4U5 519 aa21.17■□□□□ 0.98
CDC42EP4-201ENST00000335793 NKTRP30414 1462 aaKnown RBP21.16■□□□□ 0.98
CDC42EP4-201ENST00000335793 CGNL1Q0VF96 1302 aa21.16■□□□□ 0.98
CDC42EP4-201ENST00000335793 MTHFSP49914 203 aa21.15■□□□□ 0.98
CDC42EP4-201ENST00000335793 PIK3C2GO75747 1445 aa21.15■□□□□ 0.98
CDC42EP4-201ENST00000335793 CLASP1Q7Z460 1538 aa21.15■□□□□ 0.98
CDC42EP4-201ENST00000335793 PLXNC1O60486 1568 aa21.14■□□□□ 0.98
CDC42EP4-201ENST00000335793 U2SURPO15042 1029 aaKnown RBP21.14■□□□□ 0.97
CDC42EP4-201ENST00000335793 SLKQ9H2G2 1235 aaPredicted RBP21.14■□□□□ 0.97
CDC42EP4-201ENST00000335793 STK26Q9P289 416 aa21.13■□□□□ 0.97
CDC42EP4-201ENST00000335793 UPF2Q9HAU5 1272 aaKnown RBP21.12■□□□□ 0.97
CDC42EP4-201ENST00000335793 FRAT2O75474 233 aaPredicted RBP21.12■□□□□ 0.97
CDC42EP4-201ENST00000335793 RUNDC1Q96C34 613 aa21.12■□□□□ 0.97
CDC42EP4-201ENST00000335793 PDE3AQ14432 1141 aa21.11■□□□□ 0.97
CDC42EP4-201ENST00000335793 FTSJ3Q8IY81 847 aaKnown RBP21.1■□□□□ 0.97
CDC42EP4-201ENST00000335793 TRMT2AQ8IZ69 625 aaKnown RBP21.1■□□□□ 0.97
CDC42EP4-201ENST00000335793 FAM43AQ8N2R8 423 aa21.1■□□□□ 0.97
CDC42EP4-201ENST00000335793 LAMC1P11047 1609 aa21.1■□□□□ 0.97
CDC42EP4-201ENST00000335793 NSD3Q9BZ95 1437 aa21.1■□□□□ 0.97
CDC42EP4-201ENST00000335793 TRHP20396 242 aaPredicted RBP21.09■□□□□ 0.97
CDC42EP4-201ENST00000335793 TNNQ9UQP3 1299 aa21.09■□□□□ 0.97
CDC42EP4-201ENST00000335793 FANCAO15360 1455 aa21.09■□□□□ 0.97
CDC42EP4-201ENST00000335793 UGGT1Q9NYU2 1555 aa21.08■□□□□ 0.96
CDC42EP4-201ENST00000335793 BECN1Q14457 450 aa21.07■□□□□ 0.96
CDC42EP4-201ENST00000335793 NGEFQ8N5V2 710 aa21.07■□□□□ 0.96
CDC42EP4-201ENST00000335793 ABCC1P33527 1531 aa21.07■□□□□ 0.96
CDC42EP4-201ENST00000335793 SPRYD3Q8NCJ5 442 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms