RNA–Protein interactions for RNA: ENST00000335500.8

GPATCH8-201, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 8,109 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-201ENST00000335500 RUNDC1Q96C34 613 aa10.81□□□□□ -0.68
GPATCH8-201ENST00000335500 ANKRD45Q5TZF3 282 aa10.81□□□□□ -0.68
GPATCH8-201ENST00000335500 CEP89Q96ST8 783 aa10.81□□□□□ -0.68
GPATCH8-201ENST00000335500 ANKRD20A12PQ8NF67 263 aa10.81□□□□□ -0.68
GPATCH8-201ENST00000335500 CHMP3Q9Y3E7 222 aa10.81□□□□□ -0.68
GPATCH8-201ENST00000335500 SETQ01105 290 aaPredicted RBP10.81□□□□□ -0.68
GPATCH8-201ENST00000335500 CCDC146Q8IYE0 955 aa10.8□□□□□ -0.68
GPATCH8-201ENST00000335500 HFM1A2PYH4 1435 aa10.8□□□□□ -0.68
GPATCH8-201ENST00000335500 BECN2A8MW95 431 aa10.8□□□□□ -0.68
GPATCH8-201ENST00000335500 RASSF8Q8NHQ8 419 aa10.8□□□□□ -0.68
GPATCH8-201ENST00000335500 C1orf141Q5JVX7 400 aa10.8□□□□□ -0.68
GPATCH8-201ENST00000335500 DIAPH3Q9NSV4 1193 aa10.8□□□□□ -0.68
GPATCH8-201ENST00000335500 CLSTN1O94985 981 aa10.8□□□□□ -0.68
GPATCH8-201ENST00000335500 INTS3Q68E01 1043 aaKnown RBP10.8□□□□□ -0.68
GPATCH8-201ENST00000335500 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.8□□□□□ -0.68
GPATCH8-201ENST00000335500 DDX58O95786 925 aaKnown RBP10.8□□□□□ -0.68
GPATCH8-201ENST00000335500 AKAP17AQ02040 695 aaKnown RBP10.8□□□□□ -0.68
GPATCH8-201ENST00000335500 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.8□□□□□ -0.68
GPATCH8-201ENST00000335500 ISY1Q9ULR0 285 aaKnown RBP10.8□□□□□ -0.68
GPATCH8-201ENST00000335500 SYNE3Q6ZMZ3 975 aa10.79□□□□□ -0.68
GPATCH8-201ENST00000335500 DHX8Q14562 1220 aaKnown RBP10.79□□□□□ -0.68
GPATCH8-201ENST00000335500 DZIP1LQ8IYY4 767 aaKnown RBP10.79□□□□□ -0.68
GPATCH8-201ENST00000335500 TIAM1Q13009 1591 aa10.79□□□□□ -0.68
GPATCH8-201ENST00000335500 CLUAP1Q96AJ1 413 aa10.79□□□□□ -0.68
GPATCH8-201ENST00000335500 NCOA2Q15596 1464 aa10.79□□□□□ -0.68
GPATCH8-201ENST00000335500 RUSC2Q8N2Y8 1516 aa10.78□□□□□ -0.68
GPATCH8-201ENST00000335500 MCM2P49736 904 aa10.78□□□□□ -0.68
GPATCH8-201ENST00000335500 TPD52L1Q16890 204 aaPredicted RBP10.78□□□□□ -0.68
GPATCH8-201ENST00000335500 MAP7D2Q96T17 732 aa10.78□□□□□ -0.68
GPATCH8-201ENST00000335500 A0A0U1RQG5 324 aaPredicted RBP10.78□□□□□ -0.68
GPATCH8-201ENST00000335500 IPO7O95373 1038 aaKnown RBP10.78□□□□□ -0.68
GPATCH8-201ENST00000335500 CT47B1P0C2W7 299 aaPredicted RBP10.77□□□□□ -0.68
GPATCH8-201ENST00000335500 GNAI1P63096 354 aa10.77□□□□□ -0.68
GPATCH8-201ENST00000335500 HMGXB3Q12766 1538 aa10.77□□□□□ -0.68
GPATCH8-201ENST00000335500 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.77□□□□□ -0.68
GPATCH8-201ENST00000335500 ANKRD50Q9ULJ7 1429 aa10.77□□□□□ -0.68
GPATCH8-201ENST00000335500 CCDC47Q96A33 483 aaKnown RBP10.77□□□□□ -0.68
GPATCH8-201ENST00000335500 NCAPD3P42695 1498 aa10.77□□□□□ -0.69
GPATCH8-201ENST00000335500 LETM1O95202 739 aaPredicted RBP10.77□□□□□ -0.69
GPATCH8-201ENST00000335500 AMOTL1Q8IY63 956 aa10.77□□□□□ -0.69
GPATCH8-201ENST00000335500 DIAPH1O60610 1272 aaKnown RBP10.77□□□□□ -0.69
GPATCH8-201ENST00000335500 TEX35Q5T0J7 233 aa10.77□□□□□ -0.69
GPATCH8-201ENST00000335500 CRBNQ96SW2 442 aa10.77□□□□□ -0.69
GPATCH8-201ENST00000335500 ERC2O15083 957 aa10.77□□□□□ -0.69
GPATCH8-201ENST00000335500 SYNJ2O15056 1496 aa10.77□□□□□ -0.69
GPATCH8-201ENST00000335500 TRIM29Q14134 588 aa10.76□□□□□ -0.69
GPATCH8-201ENST00000335500 TEFQ10587 303 aa10.76□□□□□ -0.69
GPATCH8-201ENST00000335500 TRAK1Q9UPV9 953 aa10.76□□□□□ -0.69
GPATCH8-201ENST00000335500 ARHGAP5Q13017 1502 aa10.76□□□□□ -0.69
GPATCH8-201ENST00000335500 IGF1RP08069 1367 aa10.76□□□□□ -0.69
GPATCH8-201ENST00000335500 GRIN2BQ13224 1484 aa10.75□□□□□ -0.69
GPATCH8-201ENST00000335500 PDIA4P13667 645 aaKnown RBP10.75□□□□□ -0.69
GPATCH8-201ENST00000335500 RILPL2Q969X0 211 aa10.75□□□□□ -0.69
GPATCH8-201ENST00000335500 C9orf78Q9NZ63 289 aaPredicted RBP10.75□□□□□ -0.69
GPATCH8-201ENST00000335500 NAT10Q9H0A0 1025 aaKnown RBP10.75□□□□□ -0.69
GPATCH8-201ENST00000335500 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.75□□□□□ -0.69
GPATCH8-201ENST00000335500 KIF7Q2M1P5 1343 aa10.74□□□□□ -0.69
GPATCH8-201ENST00000335500 SYNJ1O43426 1573 aa10.74□□□□□ -0.69
GPATCH8-201ENST00000335500 TRDNQ13061 729 aa10.74□□□□□ -0.69
GPATCH8-201ENST00000335500 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.73□□□□□ -0.69
GPATCH8-201ENST00000335500 PDCP20941 246 aa10.73□□□□□ -0.69
GPATCH8-201ENST00000335500 ACBD3Q9H3P7 528 aa10.73□□□□□ -0.69
GPATCH8-201ENST00000335500 HIP1O00291 1037 aa10.73□□□□□ -0.69
GPATCH8-201ENST00000335500 TRHP20396 242 aaPredicted RBP10.73□□□□□ -0.69
GPATCH8-201ENST00000335500 EXOC6Q8TAG9 804 aa10.73□□□□□ -0.69
GPATCH8-201ENST00000335500 MBD3O95983 291 aa10.72□□□□□ -0.69
GPATCH8-201ENST00000335500 NOL10Q9BSC4 688 aaKnown RBP10.72□□□□□ -0.69
GPATCH8-201ENST00000335500 CC2D2AQ9P2K1 1620 aa10.72□□□□□ -0.69
GPATCH8-201ENST00000335500 IFIT2P09913 472 aaKnown RBP10.72□□□□□ -0.69
GPATCH8-201ENST00000335500 TTC5Q8N0Z6 440 aa10.72□□□□□ -0.69
GPATCH8-201ENST00000335500 MAP3K1Q13233 1512 aa10.72□□□□□ -0.69
GPATCH8-201ENST00000335500 PDE3AQ14432 1141 aa10.72□□□□□ -0.69
GPATCH8-201ENST00000335500 ARGLU1Q9NWB6 273 aaPredicted RBP10.72□□□□□ -0.69
GPATCH8-201ENST00000335500 G3V3G9 751 aa10.72□□□□□ -0.69
GPATCH8-201ENST00000335500 PSMA5P28066 241 aa10.72□□□□□ -0.69
GPATCH8-201ENST00000335500 DCAF8Q5TAQ9 597 aa10.72□□□□□ -0.69
GPATCH8-201ENST00000335500 MRE11P49959 708 aa10.71□□□□□ -0.69
GPATCH8-201ENST00000335500 APAF1O14727 1248 aa10.71□□□□□ -0.69
GPATCH8-201ENST00000335500 MARCH6O60337 910 aa10.71□□□□□ -0.69
GPATCH8-201ENST00000335500 FRAT2O75474 233 aaPredicted RBP10.71□□□□□ -0.69
GPATCH8-201ENST00000335500 COG6Q9Y2V7 657 aa10.71□□□□□ -0.69
GPATCH8-201ENST00000335500 RIPK4P57078 832 aa10.71□□□□□ -0.69
GPATCH8-201ENST00000335500 C22orf23Q9BZE7 217 aa10.71□□□□□ -0.7
GPATCH8-201ENST00000335500 CPLX1O14810 134 aa10.71□□□□□ -0.7
GPATCH8-201ENST00000335500 SASS6Q6UVJ0 657 aa10.71□□□□□ -0.7
GPATCH8-201ENST00000335500 ZNF330Q9Y3S2 320 aaPredicted RBP10.71□□□□□ -0.7
GPATCH8-201ENST00000335500 CCP110O43303 1012 aa10.7□□□□□ -0.7
GPATCH8-201ENST00000335500 GTF2E1P29083 439 aaPredicted RBP10.7□□□□□ -0.7
GPATCH8-201ENST00000335500 CDR1P51861 262 aa10.7□□□□□ -0.7
GPATCH8-201ENST00000335500 G3BP1Q13283 466 aaKnown RBP eCLIP10.7□□□□□ -0.7
GPATCH8-201ENST00000335500 DNMBPQ6XZF7 1577 aa10.7□□□□□ -0.7
GPATCH8-201ENST00000335500 SAFBQ15424 915 aaKnown RBP eCLIP10.7□□□□□ -0.7
GPATCH8-201ENST00000335500 SMC3Q9UQE7 1217 aa10.7□□□□□ -0.7
GPATCH8-201ENST00000335500 CFTRP13569 1480 aa10.7□□□□□ -0.7
GPATCH8-201ENST00000335500 KIAA1107Q9UPP5 1409 aa10.69□□□□□ -0.7
GPATCH8-201ENST00000335500 FAM43AQ8N2R8 423 aa10.69□□□□□ -0.7
GPATCH8-201ENST00000335500 ZNF428Q96B54 188 aa10.69□□□□□ -0.7
GPATCH8-201ENST00000335500 CCDC39Q9UFE4 941 aa10.69□□□□□ -0.7
GPATCH8-201ENST00000335500 CDC45O75419 566 aa10.69□□□□□ -0.7
GPATCH8-201ENST00000335500 RRP7AQ9Y3A4 280 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms